RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Taf10Q8K0H5 218 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Ndufs2Q91WD5 463 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Q91Z58 1206 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Bbox1Q924Y0 387 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Gemin2Q9CQQ4 269 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Ttyh1Q9D3A9 450 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Slc22a17Q9D9E0 401 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Iigp1Q9QZ85 413 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Ttc6G3UYY4 1857 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Ttll8A4Q9F1 832 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Gm16427J3QN52 483 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 DgkaO88673 730 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Lsp1P19973 330 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Stat5aP42230 793 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Gad1P48318 593 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Rad54lP70270 747 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Surf6P70279 355 aaKnown RBP7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Olfr121Q5CZY0 321 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Ccdc157Q5SPX1 718 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Aldh1a2Q62148 518 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Trim21Q62191 470 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Oxsr1Q6P9R2 527 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 SpopQ6ZWS8 374 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Otop2Q80SX5 563 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Ppp2r2cQ8BG02 447 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Znf365Q8BG89 408 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Klhl7Q8BUL5 586 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Sept10Q8C650 452 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Cyp2d26Q8CIM7 500 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Eif3cQ8R1B4 911 aaKnown RBP7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Foxe1Q8R2I0 371 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Cbwd1Q8VEH6 393 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Eif4a3Q91VC3 411 aaKnown RBP7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Cyp2c70Q91W64 489 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Pomgnt1Q91X88 660 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Pcdha2Q91Y17 948 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Capns2Q9D7J7 247 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Erap1Q9EQH2 930 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 NckipsdQ9ESJ4 714 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Fgf22Q9ESS2 162 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Tacc3Q9JJ11 631 aa7.21□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Sh2d4bA6X942 431 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Zfp266E9Q2S7 604 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Gm3127E9Q9P5 263 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Gm3453K7N724 263 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ift81O35594 676 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Gja1P23242 382 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 YwhaqP68254 245 aaKnown RBP7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Mcl1P97287 331 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Sox13Q04891 613 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Tmem26Q3UP23 366 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Nek5Q7TSC3 627 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Baiap3Q80TT2 1134 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Rps6kc1Q8BLK9 1056 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ctxn3Q8BXZ0 80 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Abcg3Q99P81 650 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Marc1Q9CW42 340 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Pdk2Q9JK42 407 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Itga2bQ9QUM0 1033 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 CitP49025 2055 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Dpy19l4A2AJQ3 722 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Gm3371F7CQW8 167 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Slc2a4P14142 509 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Tmem165P52875 323 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Zmym1Q3TJB1 983 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Trip13Q3UA06 432 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Fam92bQ3V2J0 292 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Srek1ip1Q4V9W2 153 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Fhod1Q6P9Q4 1197 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Smarcal1Q8BJL0 910 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ldhal6bQ8BVP2 382 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ppp4r4Q8C0Y0 875 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Wdr27Q8C5V5 780 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 AagabQ8R2R3 316 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Slc30a5Q8R4H9 761 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ccdc71Q8VEG0 433 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Q922M7 232 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Pde2aQ922S4 916 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Gps1Q99LD4 471 aaKnown RBP7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Tex46Q9CPU3 165 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Pla2g2fQ9QZT4 168 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Trpv2Q9WTR1 756 aa7.21□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Cntnap4Q99P47 1310 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ttc3O88196 1979 aaKnown RBP7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ptpn3A2ALK8 913 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Zfp651E9PZ11 729 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Sept7O55131 436 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Slc12a1P55014 1095 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Chp1P61022 195 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 March5Q3KNM2 278 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Gm1604bQ3TRG0 118 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Rmdn3Q3UJU9 470 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Pabpn1lQ5XFR0 273 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ksr1Q61097 873 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 TfrcQ62351 763 aaKnown RBP7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Gpatch2lQ6PE65 482 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Spag7Q7TNE3 227 aaKnown RBP7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Rcn2Q8BP92 320 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Pnma3Q8JZW8 466 aa7.2□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Kctd15Q8K0E1 283 aa7.2□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms