RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Acvr2bP27040 536 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 HpdP49429 393 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 P2rx5Q3UYI1 455 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Ttc9Q3V038 219 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Trnp1Q80ZI1 223 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 DcakdQ8BHC4 231 aaKnown RBP12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Gbp9Q8BTS3 619 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Aldh4a1Q8CHT0 562 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Asb11Q9CQ31 323 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 KynuQ9CXF0 464 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Ubxn11Q9D572 484 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Prpf4Q9DAW6 521 aaKnown RBP12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 RpgrQ9R0X5 1001 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Sbno2Q7TNB8 1349 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Ksr1Q61097 873 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Pde1aQ61481 565 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Atp11bQ6DFW5 1175 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Nlrp4bQ8C6J9 863 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Wdr11Q8K1X1 1223 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Scgb2b7D3YYY1 112 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Fam205cQ80YD3 371 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Champ1Q8K327 802 aaKnown RBP12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Alg1Q921Q3 482 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Polr3hQ9D2C6 204 aaKnown RBP12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 IkbipQ9DBZ1 373 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 PlekQ9JHK5 350 aaKnown RBP12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Tmem59Q9QY73 323 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Zbtb18Q9WUK6 522 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Ror2Q9Z138 944 aa12.32□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Znf804aA2AKY4 1200 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Gm6133B2RY53 190 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Cd68P31996 326 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 GemP55041 295 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Kcna2P63141 499 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Lrrc1Q80VQ1 524 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Tmem132aQ922P8 1018 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Slc6a21A0A1B0GSD2 748 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Atp8b5A3FIN4 1183 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Ace3D0G895 737 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Pcbp1P60335 356 aaKnown RBP12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Hspa8P63017 646 aaKnown RBP12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Mfsd14aP70187 490 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Far2Q7TNT2 515 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Fbxl13Q8CDU4 790 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Tbc1d13Q8R3D1 400 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 S100pbpQ9D5K4 396 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Pou2f3P31362 431 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 MafbP54841 323 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Mif4gdQ3UBZ5 222 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Pla2g4dQ50L43 825 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Adgre1Q61549 931 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Vgll2Q8BGW8 322 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Pcdha3Q91Y16 942 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Dpp3Q99KK7 738 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Ppp1r12aQ9DBR7 1029 aaKnown RBP12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Mapk13Q9Z1B7 366 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Spata31d1dE9Q5W2 1247 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Tmprss11aQ3UQ41 389 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Olfm4Q3UZZ4 505 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Tbc1d1Q60949 1255 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Camkk2Q8C078 588 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Q8CCC3 530 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Q8CD60 292 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 TwnkQ8CIW5 685 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Ndufb5Q9CQH3 189 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Rnf4Q9QZS2 194 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Morf4l2Q9R0Q4 288 aa12.31□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Bpifb9bA2AJD1 591 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Ssxb9A2BI93 185 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Spin2fJ3QPU0 254 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Sdc4O35988 198 aaKnown RBP12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Stx7O70439 261 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Mmp3P28862 477 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Akt1P31750 480 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Mfhas1Q3V1N1 1048 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Tfe3Q64092 572 aaKnown RBP12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Gja6Q6S5G4 283 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Bpifb9aQ80XI7 591 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Ndufs2Q91WD5 463 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Tceal1Q921P9 165 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Iigp1Q9QZ85 413 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Grk1Q9WVL4 564 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Cacna1sQ02789 1880 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Hsf3D0VYS2 492 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 YwhazP63101 245 aaKnown RBP12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Zfyve27Q3TXX3 415 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Rpa1Q8VEE4 623 aaKnown RBP12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Dpy19l4A2AJQ3 722 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 4930544D05RikJ3QK56 214 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Lrrc6O88978 473 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Sult1e1P49891 295 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Cyp2c65Q148B1 490 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Serpinb6dQ3UWK8 375 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Nkiras1Q8CEC5 192 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 DgkeQ9R1C6 564 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Skint6A7XUZ6 1240 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 IkbkgO88522 412 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Ppm1nQ8BGL1 404 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 ParvbQ9ES46 365 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 GgcxQ9QYC7 757 aa12.3□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms