RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Trpc1Q61056 793 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Zfp943Q6NZP4 507 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Znf12Q7TSI0 686 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Vmn2r43Q80Z08 845 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 OgtQ8CGY8 1046 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 PdgfcQ8CI19 345 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Stau2Q8CJ67 570 aaKnown RBP11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 ItpkaQ8R071 459 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 FktnQ8R507 461 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Slc35c2Q8VCX2 364 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Pcdha9Q91Y11 979 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Fam49bQ921M7 324 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Nsmce3Q9CPR8 279 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 AticQ9CWJ9 592 aaKnown RBP11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Cib2Q9Z309 187 aa11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 SktA2AQ25 1946 aaKnown RBP11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Myo18aQ9JMH9 2050 aaKnown RBP11.11□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Bfsp1A2AMT1 669 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Ccnyl1D3YUJ3 367 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Srsf11E9Q6E5 511 aaKnown RBP11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Zw10O54692 779 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Cetn1P41209 172 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 RenbpP82343 430 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Ptgs2Q05769 604 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Ppp1r14bQ62084 147 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Mysm1Q69Z66 819 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 FAM120AQ6A0A9 1112 aaKnown RBP11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 PrcpQ7TMR0 491 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Impg2Q80XH2 1243 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Nipal4Q8BZF2 406 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Utp6Q8VCY6 597 aaKnown RBP11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Olfr395Q8VGR3 312 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Pcdhac2Q91Y09 1006 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Ndufb5Q9CQH3 189 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Spata31d1aE9QA35 1336 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Tbc1d25A1A5B6 742 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Gm1141B9EJU1 475 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Clk2O35491 499 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Nr3c1P06537 783 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Serpina1eQ00898 413 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Grm6Q5NCH9 871 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Foxn1Q61575 648 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Itih3Q61704 889 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Map2k2Q63932 401 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 C2cd2lQ80X80 706 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Wdr37Q8CBE3 496 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Kctd15Q8K0E1 283 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Kdelr1Q99JH8 212 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Cttnbp2nlQ99LJ0 638 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Tssk3Q9D2E1 268 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 MlklQ9D2Y4 472 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 IydQ9DCX8 285 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Tsga8Q9JJL0 238 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Bace2Q9JL18 514 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 PnkpQ9JLV6 522 aaKnown RBP11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Scn1aA2APX8 2009 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Apold1E9Q0X2 246 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 PtprcP06800 1291 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 PrlP06879 226 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Elk3P41971 409 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 MafP54843 370 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Hmgcs2P54869 508 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Sh3bp2Q06649 559 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Trappc3lQ4KL14 181 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 LbpQ61805 481 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Rpf1Q7TND5 349 aaKnown RBP11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Zfp454Q80Y34 536 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Polr2bQ8CFI7 1174 aaKnown RBP11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Mcoln2Q8K595 566 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 OlahQ8R197 265 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Nt5c1bQ91YE9 573 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Dnajc3Q91YW3 504 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Cpt1bQ924X2 772 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Zfp64Q99KE8 643 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 St13Q99L47 371 aaKnown RBP11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Akt3Q9WUA6 479 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Scn10aQ6QIY3 1958 aa11.1□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Fndc3c1Q6DFV6 1356 aa11.09□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Olfr310B2RVZ1 332 aa11.09□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Bmpr2O35607 1038 aa11.09□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Axin1O35625 863 aa11.09□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Il3P01586 166 aa11.09□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 EpoP07321 192 aa11.09□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Lire1P11260 357 aa11.09□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Ass1P16460 412 aa11.09□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Rasgrf2P70392 1189 aa11.09□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Npas2P97460 816 aa11.09□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Ly9Q01965 654 aa11.09□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Olfm4Q3UZZ4 505 aa11.09□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Foxb2Q64733 428 aa11.09□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 HltfQ6PCN7 1003 aa11.09□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Moxd2Q7TT41 619 aa11.09□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Q8BHN7 327 aa11.09□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Prkag2Q91WG5 566 aa11.09□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Sgf29Q9DA08 293 aaKnown RBP11.09□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Rad18Q9QXK2 509 aaKnown RBP11.09□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Cpsf3Q9QXK7 684 aa11.09□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Gm29133A0A1B0GT72 266 aa11.09□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 AlpiF8VPQ6 554 aa11.09□□□□□ -0.63
Ptcd1-201ENSMUST00000031628 Zfp212G3X8R7 492 aa11.09□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms