RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Itpk1Q8BYN3 419 aa11.98□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Lrrc3bQ8VCH9 259 aa11.98□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Fam114a2Q8VE88 497 aa11.98□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Cyp4a12aQ91WL5 508 aa11.98□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Ddit4Q9D3F7 229 aa11.98□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Sgf29Q9DA08 293 aaKnown RBP11.98□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Utp3Q9JI13 469 aaKnown RBP11.98□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Stau1Q9Z108 487 aaKnown RBP11.98□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Vps13aQ5H8C4 3166 aa11.98□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 0610012G03RikA0A0J9YTR2 95 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Atp2c2A7L9Z8 944 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Zfp266E9Q2S7 604 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Gm21293E9Q4G9 266 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Myl4P09541 193 aaKnown RBP11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Mup5P11591 180 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Chrm1P12657 460 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Adrb1P34971 466 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Folr1P35846 255 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 CidecP56198 239 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Pou6f1Q07916 301 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Muc3aQ3U5A2 218 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Ice2Q3UZ18 988 aaKnown RBP11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Rnf43Q5NCP0 784 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Cxcl17Q5UW37 119 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Trim17Q7TPM3 477 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Slitrk1Q810C1 696 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Ankrd45Q810N6 248 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Tmco3Q8BH01 678 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Smoc1Q8BLY1 463 aaKnown RBP11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Slc9a4Q8BUE1 797 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Slc26a6Q8CIW6 758 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Klhl20Q8VCK5 604 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Barhl2Q8VIB5 384 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Lysmd3Q99LE3 305 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Trmt11Q9CWH5 460 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Mdm1Q9D067 708 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Spry1Q9QXV9 313 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Adam22Q9R1V6 904 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Trpv2Q9WTR1 756 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Asb3Q9WV72 525 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Gfpt2Q9Z2Z9 682 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Top3bQ9Z321 862 aaKnown RBP11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Rpl9-ps1S4R1R7 191 aa11.97□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Lrrc37aB1AWG4 3215 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Osbpl7A2A716 963 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Brpf3B2KF05 1204 aaKnown RBP11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Farp1F8VPU2 1048 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Angpt1O08538 498 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Dpysl4O35098 572 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Pip4k2aO70172 405 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Sypl2O89104 264 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 PrphP15331 475 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Tsta3P23591 321 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Ptger3P30557 365 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Ddx6P54823 483 aaKnown RBP11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Eef1dP57776 281 aaKnown RBP11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Tpm2P58774 284 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Serpina5P70458 405 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Gabpb2P81069 414 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 VegfcP97953 415 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Perm1Q149B8 807 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Rnf10Q3UIW5 804 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Ceacam5Q3UKK2 947 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 HecaQ3V1N5 544 aaKnown RBP11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Nr2c1Q505F1 590 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 SynaQ5G5D5 617 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Hsf5Q5ND04 624 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 PkdccQ5RJI4 492 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Slc6a4Q60857 630 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 MmeQ61391 750 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 TCAIMQ66JZ4 499 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Isy1Q69ZQ2 285 aaKnown RBP11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Tpm4Q6IRU2 248 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Hmgb4Q6P8W9 181 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Rasa4Q6PFQ7 802 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Tcp10aQ80W76 438 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Mrpl38Q8K2M0 380 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Kcnk13Q8R1P5 405 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Atp1a1Q8VDN2 1023 aaKnown RBP11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Ubox5Q925F4 539 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 TMEM121BQ99MX7 572 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Rfc5Q9D0F6 339 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 4931423N10RikQ9D4J9 382 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Xpo4Q9ESJ0 1151 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Tcirg1Q9JHF5 834 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Cyp39a1Q9JKJ9 470 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Piwil1Q9JMB7 862 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 St6galnac4Q9R2B6 360 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Insl5Q9WUG6 135 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 PapolbQ9WVP6 641 aa11.96□□□□□ -0.49
Ccdc28b-201ENSMUST00000030586 Alpk2Q91ZB0 2144 aa11.96□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Gm5580A0A0N4SVP8 411 aa11.95□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 5830411N06RikB3F5L4 1112 aa11.95□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Gm3336J3QMQ6 198 aa11.95□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Ebf3O08791 596 aa11.95□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Tnk2O54967 1055 aa11.95□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Hoxd12P23812 268 aa11.95□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Serpinc1P32261 465 aa11.95□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 FynP39688 537 aa11.95□□□□□ -0.5
Ccdc28b-201ENSMUST00000030586 Lhx5P61375 402 aa11.95□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms