RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Dnali1Q8BVN8 258 aa21.03■□□□□ 0.96
Ctdsp1-201ENSMUST00000027367 Sgk1Q9WVC6 431 aa21.03■□□□□ 0.96
Ctdsp1-201ENSMUST00000027367 Tbc1d16A2ABG4 766 aa21.03■□□□□ 0.96
Ctdsp1-201ENSMUST00000027367 GckP52792 465 aa21.03■□□□□ 0.96
Ctdsp1-201ENSMUST00000027367 Srrm1Q52KI8 946 aaKnown RBP21.03■□□□□ 0.96
Ctdsp1-201ENSMUST00000027367 Kiaa1328Q6NZK5 612 aa21.03■□□□□ 0.96
Ctdsp1-201ENSMUST00000027367 Vmn2r43Q80Z08 845 aa21.03■□□□□ 0.96
Ctdsp1-201ENSMUST00000027367 Daam1Q8BPM0 1077 aa21.03■□□□□ 0.96
Ctdsp1-201ENSMUST00000027367 Dis3lQ8C0S1 1053 aa21.03■□□□□ 0.96
Ctdsp1-201ENSMUST00000027367 Vmn1r191Q8K4D0 298 aa21.03■□□□□ 0.96
Ctdsp1-201ENSMUST00000027367 Alas1Q8VC19 642 aa21.03■□□□□ 0.96
Ctdsp1-201ENSMUST00000027367 Nek8Q91ZR4 698 aa21.03■□□□□ 0.96
Ctdsp1-201ENSMUST00000027367 Rpa3Q9CQ71 121 aa21.03■□□□□ 0.96
Ctdsp1-201ENSMUST00000027367 Gys1Q9Z1E4 738 aaKnown RBP21.03■□□□□ 0.96
Ctdsp1-201ENSMUST00000027367 F6Y6L6 278 aa21.02■□□□□ 0.96
Ctdsp1-201ENSMUST00000027367 Aff1O88573 1216 aa21.02■□□□□ 0.96
Ctdsp1-201ENSMUST00000027367 Vti1aO89116 217 aa21.02■□□□□ 0.96
Ctdsp1-201ENSMUST00000027367 Oprl1P35377 367 aa21.02■□□□□ 0.96
Ctdsp1-201ENSMUST00000027367 Rab34Q64008 259 aa21.02■□□□□ 0.96
Ctdsp1-201ENSMUST00000027367 Krt12Q64291 487 aa21.02■□□□□ 0.96
Ctdsp1-201ENSMUST00000027367 Tdrd7Q8K1H1 1086 aaKnown RBP21.02■□□□□ 0.96
Ctdsp1-201ENSMUST00000027367 Mtmr14Q8VEL2 648 aa21.02■□□□□ 0.96
Ctdsp1-201ENSMUST00000027367 Jph2Q9ET78 696 aa21.02■□□□□ 0.96
Ctdsp1-201ENSMUST00000027367 Caln1Q9JJG7 219 aa21.02■□□□□ 0.96
Ctdsp1-201ENSMUST00000027367 Krt27Q9Z320 448 aa21.02■□□□□ 0.96
Ctdsp1-201ENSMUST00000027367 IhhP97812 411 aa21.02■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Txndc8Q69AB2 127 aa21.02■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Atl2Q6PA06 583 aa21.02■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Sec24bQ80ZX0 1251 aa21.02■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Orai2Q8BH10 250 aa21.02■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Pxylp1Q8BHA9 480 aa21.02■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Fbxl5Q8C2S5 690 aa21.02■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Gga1Q8R0H9 635 aa21.02■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 NcaldQ91X97 193 aa21.02■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Slc39a3Q99K24 317 aa21.02■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 PapolbQ9WVP6 641 aa21.02■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Patl2A2ARM1 529 aa21.01■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Ptchd4B9EKX1 904 aa21.01■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 D3Z070 196 aa21.01■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Farp1F8VPU2 1048 aa21.01■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Ctnnal1O88327 731 aa21.01■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Vav1P27870 845 aa21.01■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 RxrbP28704 520 aa21.01■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Fermt1P59113 677 aa21.01■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 G3bp2P97379 482 aaKnown RBP21.01■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Yipf3Q3UDR8 347 aa21.01■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Fam160b1Q8CDM8 764 aa21.01■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Tdrd12Q9CWU0 1215 aa21.01■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Ccdc130Q9D516 385 aa21.01■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Trpv2Q9WTR1 756 aa21.01■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Zmynd8A2A484 1235 aaKnown RBP21.01■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 AlpiF8VPQ6 554 aa21.01■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Mfsd4b4J3QNS5 503 aa21.01■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Casp14O89094 257 aa21.01■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Mks1Q5SW45 561 aa21.01■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Olfr389Q7TRX7 312 aa21.01■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Sh3tc2Q80VA5 1289 aa21.01■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Brat1Q8C3R1 822 aa21.01■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Nedd9O35177 833 aa21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 P01650 108 aa21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 P01653 108 aa21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Zfp42P22227 288 aa21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 AmhP27106 555 aa21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Arl5cQ6P068 179 aa21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Kif11Q6P9P6 1052 aa21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Fam185aQ7TPD2 378 aa21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Smndc1Q8BGT7 238 aaKnown RBP21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Sec14l2Q99J08 403 aa21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Scgb2b21A0A087WQA9 112 aa21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Vmn2r121A2BE32 847 aa21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Lrriq4A6H6A4 596 aa21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Pcdh9F8VPK8 1237 aa21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Rab20P35295 233 aa21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 St3gal1P54751 337 aa21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Pcbp1P60335 356 aaKnown RBP21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Zfp957Q3UT76 567 aa21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Tarsl2Q8BLY2 790 aa21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Dpp9Q8BVG4 862 aa21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Stau2Q8CJ67 570 aaKnown RBP21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Abcf3Q8K268 709 aa21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Coq6Q8R1S0 476 aa21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Tbc1d13Q8R3D1 400 aa21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Cys1Q8R4T1 145 aa21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Ugp2Q91ZJ5 508 aa21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Gucy1a3Q9ERL9 691 aa21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 TfgQ9Z1A1 397 aa21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Myo16Q5DU14 1919 aa21■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Slc16a6B1AT66 607 aa20.99■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Dzip1lQ499E4 774 aa20.99■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Zfp90Q61967 636 aa20.99■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Sh2d5Q8JZW5 429 aa20.99■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Trim60Q8VI40 466 aa20.99■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Tmem86aQ9D8N3 241 aa20.99■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Zfp236S4R299 1847 aa20.99■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Casq2O09161 415 aa20.99■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Plk1Q07832 603 aa20.99■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Zfp658Q5PPQ4 887 aa20.99■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Fscn1Q61553 493 aa20.99■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Scube3Q66PY1 993 aa20.99■□□□□ 0.95
Ctdsp1-201ENSMUST00000027367 Papd5Q68ED3 633 aaKnown RBP20.99■□□□□ 0.95
Retrieved 100 of 22,080 RNA–protein pairs in 24.6 ms