RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Cyp2c29Q64458 490 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm7247Q6UY52 187 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Q8BGC1 442 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Pum3Q8BKS9 647 aaKnown RBP4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Zc3h6Q8BYK8 1177 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Unc45aQ99KD5 944 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Dnajb4Q9D832 337 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Add1Q9QYC0 735 aaKnown RBP4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 AadatQ9WVM8 425 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Mtmr1Q9Z2C4 669 aa4.72□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm13023A2A8N2 498 aa4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Dhx37Q6NZL1 1150 aa4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Btbd10Q80X66 475 aa4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Epb41l5Q8BGS1 731 aa4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Smndc1Q8BGT7 238 aaKnown RBP4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Eno4Q8C042 619 aa4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 ClyblQ8R4N0 338 aa4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Tor1aip1Q921T2 595 aaKnown RBP4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Prmt3Q922H1 532 aa4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Mmtag2Q99LX5 260 aaKnown RBP4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Mzt2Q9CQ25 159 aa4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 AllcQ9JHX6 414 aa4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Arih1Q9Z1K5 555 aa4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Col1a1P11087 1453 aa4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm45261A0A1B0GSP6 197 aa4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Skint6A7XUZ6 1240 aa4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Scg3P47867 471 aa4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Agxt2Q3UEG6 513 aa4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Odr4Q4PJX1 447 aa4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Samhd1Q60710 627 aa4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Tfdp2Q64163 446 aa4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Tlr12Q6QNU9 906 aa4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Lrrc24Q8BHA1 521 aa4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Larp6Q8BN59 492 aa4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 MtrrQ8C1A3 696 aa4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Tnfaip8Q921Z5 198 aa4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Ift46Q9DB07 301 aa4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Slc12a4Q9JIS8 1085 aa4.71□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm12394A2AKP6 982 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Btg3P50615 252 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Itih2Q61703 946 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Gucy2gQ6TL19 1100 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 4921511C20RikQ8BVT7 469 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Gpc5Q8CAL5 572 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 HyiQ8R1F5 277 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Creb3l3Q91XE9 479 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Cep72Q9D3R3 646 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Edf1Q9JMG1 148 aaKnown RBP4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Capn7Q9R1S8 813 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Sorbs3Q9R1Z8 733 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Atn1O35126 1175 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Kcnj6P48542 425 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Nr2c2P49117 596 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Rpl22P67984 128 aaKnown RBP4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Esrp1Q3US41 680 aaKnown RBP4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Myo19Q5SV80 963 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 CrkQ64010 304 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Frmd5Q6P5H6 517 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Zfp446Q8C9M8 523 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Fam111aQ9D2L9 613 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Krt81Q9ERE2 481 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Akap8lQ9R0L7 642 aaKnown RBP4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Gm13088A2AGW6 460 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Zfp472B0V2W5 534 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Slc2a4P14142 509 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Hoxc13P50207 328 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 PolgP54099 1218 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Rin3P59729 980 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Tbx1P70323 479 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Gas1Q01721 343 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Ptcd3Q14C51 685 aaKnown RBP4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Tfcp2l1Q3UNW5 479 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 VclQ64727 1066 aaKnown RBP4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Q8BP99 230 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Spag16Q8K450 639 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Tmem9Q9CR23 183 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Clca1Q9D7Z6 913 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Pidd1Q9ERV7 915 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Krt24A1L317 512 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Ripor3A1L3T7 938 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Ncam1P13595 1115 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Ripk2P58801 539 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Scn1bP97952 218 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 4930430A15RikQ05AC5 485 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Oxr1Q4KMM3 866 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Fam169aQ5XG69 665 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Far2Q7TNT2 515 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Atp6v0d2Q80SY3 350 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 EmsyQ8BMB0 1264 aaKnown RBP4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Prkaa2Q8BRK8 552 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Hacd3Q8K2C9 362 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Mnd1Q8K396 205 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Ssu72Q9CY97 194 aaKnown RBP4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 MispQ9D279 648 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Ehd1Q9WVK4 534 aaKnown RBP4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Gm5795E9PZN8 263 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Foxn2E9Q7L6 429 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Zfp408H7BX78 710 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Ptprn2P80560 1001 aa4.71□□□□□ -1.66
Prkdc-201ENSMUST00000023352 Gdpgp1Q3TLS3 386 aa4.71□□□□□ -1.66
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms