RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Glt6d1Q2NKH9 311 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Q3UJP5 209 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ece2Q80Z60 881 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Wdr35Q8BND3 1181 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Zfp263Q8CF60 680 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Rab11fip1Q9D620 645 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ccdc88cQ6VGS5 2009 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Cntnap1O54991 1385 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 C4bP01029 1738 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Txndc8Q69AB2 127 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Pi4kbQ8BKC8 816 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 AslQ91YI0 464 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ak5Q920P5 562 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 GsdmcQ99NB5 468 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Psmd12Q9D8W5 456 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Tm9sf1Q9DBU0 606 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Ubiad1Q9DC60 336 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 PodxlQ9R0M4 503 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 Tnni1Q9WUZ5 187 aa13.21□□□□□ -0.29
Clcn3-201ENSMUST00000004430 UgcgO88693 394 aa13.21□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Mcpt4P21812 246 aa13.21□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Vcam1P29533 739 aa13.21□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Nlrp4eQ66X19 978 aa13.21□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Rnf168Q80XJ2 565 aa13.21□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Nup93Q8BJ71 819 aaKnown RBP13.21□□□□□ -0.3
Clcn3-201ENSMUST00000004430 3830417A13RikQ8BQJ2 303 aa13.21□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Tmem74Q8BQU7 305 aa13.21□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Nudt8Q9CR24 210 aa13.21□□□□□ -0.3
Clcn3-201ENSMUST00000004430 SynrgQ5SV85 1306 aa13.21□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Gm16430A6X8J1 155 aa13.21□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Hmgxb3G3X9M3 1254 aa13.21□□□□□ -0.3
Clcn3-201ENSMUST00000004430 ChrngP04760 519 aa13.21□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Pms2P54279 859 aa13.21□□□□□ -0.3
Clcn3-201ENSMUST00000004430 LipeP54310 759 aa13.21□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Gprin1Q3UNH4 932 aa13.21□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Baiap2l2Q80Y61 522 aa13.21□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Slitrk1Q810C1 696 aa13.21□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Smndc1Q8BGT7 238 aaKnown RBP13.21□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Hdac11Q91WA3 347 aa13.21□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Abtb1Q99LJ2 478 aa13.21□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Slxl1Q9D515 155 aa13.21□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Ubxn11Q9D572 484 aa13.21□□□□□ -0.3
Clcn3-201ENSMUST00000004430 EtfbQ9DCW4 255 aaKnown RBP13.21□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Tjp3Q9QXY1 905 aa13.21□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Ccdc88aQ5SNZ0 1873 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Wdr49A0A0N4SUK7 710 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 AlpiF8VPQ6 554 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Pgk2P09041 417 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 PtpreP49446 699 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Ripor1Q68FE6 1223 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Mpp4Q6P7F1 635 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Q8BGC1 442 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Csde1Q91W50 798 aaKnown RBP13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Mageb3Q9D2H4 330 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Usp21Q9QZL6 566 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Tnip3A0A1D5RMN0 279 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Mup10A2BIN1 180 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Mup14A2CEK7 180 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Mup19A9C497 187 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Mup15A9R9W0 180 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Mup17B5X0G2 180 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Mup8E9PVW0 235 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Mup7E9QA79 235 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 E230025N22RikG5E8S3 482 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Vmn2r15L7N2A0 855 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Mup6P02762 180 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Mup1P11588 180 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Mup2P11589 180 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Gata5P97489 404 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Plk1Q07832 603 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Exoc3l4Q6DIA2 721 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Rbm12b1Q80YR9 836 aaKnown RBP13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Siglec10Q80ZE3 688 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Arhgap15Q811M1 481 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Tmco6Q8BQX5 494 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Q99KU6 348 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Prpsap1Q9D0M1 356 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Zfp105G3X9I0 524 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Ctc1Q5SUQ9 1212 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 N4bp1Q6A037 893 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Fam185aQ7TPD2 378 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Zfp418Q8BFS8 652 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Lpin3Q99PI4 848 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 MceeQ9D1I5 178 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Tmem81Q9D5K1 259 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Rgs3Q9DC04 966 aa13.2□□□□□ -0.3
Clcn3-201ENSMUST00000004430 2210011C24RikA0A087WQ89 206 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Ttc30a2A2AKQ8 664 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 UncxO08934 530 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 OmdO35103 423 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Snx3O70492 162 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Gja5Q01231 358 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 NfiaQ02780 532 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Lipo3Q3UT41 399 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 A1cfQ5YD48 595 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Itih1Q61702 907 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Tm4sf1Q64302 202 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Zfyve28Q6ZPK7 905 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Lrrc24Q8BHA1 521 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Nrbf2Q8VCQ3 287 aa13.19□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms