RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Tpp2Q64514 1262 aa19.5■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Olfr1505Q7TQQ2 316 aa19.5■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Zdhhc15Q8BGJ0 337 aa19.5■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Rec114Q9CWH4 259 aa19.5■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Rnf138rt1Q9D9M9 248 aa19.5■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Sfmbt1Q9JMD1 863 aa19.5■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Nphs1Q9QZS7 1256 aa19.5■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Cd97Q9Z0M6 818 aa19.5■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Smok3aC0HKC8 504 aa19.49■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Smok3bC0HKC9 504 aa19.49■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Prmt9Q3U3W5 846 aa19.49■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 PrkciQ62074 595 aaKnown RBP19.49■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Sh3gl3Q62421 347 aa19.49■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Cdc14aQ6GQT0 603 aa19.49■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Gucy2gQ6TL19 1100 aa19.49■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 SrlQ7TQ48 910 aa19.49■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Pde6cQ91ZQ1 861 aa19.49■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Actl7bQ9QY83 418 aa19.49■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Fam171a2A2A699 822 aa19.49■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 D3Z070 196 aa19.49■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Pld5Q3UNN8 536 aa19.49■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Rfx6Q8C7R7 927 aa19.49■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 N4bp3Q8C7U1 537 aa19.49■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Trem2Q99NH8 227 aa19.49■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 1700123K08RikQ9D991 295 aa19.49■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Prl2a1Q9JHK0 228 aa19.49■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Krt16Q9Z2K1 469 aa19.49■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Lrriq4A6H6A4 596 aa19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Tekt5G5E8A8 557 aa19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Prkg1P0C605 671 aa19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Alkbh5Q3TSG4 395 aaKnown RBP19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Eif2dQ61211 570 aaKnown RBP19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Arhgap20Q6IFT4 1182 aa19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Arhgef18Q6P9R4 1021 aa19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Ddx55Q6ZPL9 600 aaKnown RBP19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Tas2r109Q7M707 316 aa19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 1700129C05RikQ9CQ77 218 aa19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Tspan17Q9D7W4 270 aa19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Ggps1Q9WTN0 300 aa19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 MipepA6H611 711 aa19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Olfr310B2RVZ1 332 aa19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Pdzrn4E9PUZ9 1014 aa19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Prom1O54990 867 aa19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 AlplP09242 524 aa19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Ythdf1P59326 559 aaKnown RBP19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Dab2P98078 766 aa19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Mrgprx2Q3UG50 352 aa19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Cand1Q6ZQ38 1230 aa19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Olfr392Q7TRX6 312 aa19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Exoc3l1Q8BI71 739 aa19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Wdr27Q8C5V5 780 aa19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Mov10l1Q99MV5 1187 aa19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Riok3Q9DBU3 519 aaKnown RBP19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 HemgnQ9ERZ0 503 aa19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Atp6v1c1Q9Z1G3 382 aa19.48■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Shmt1P50431 478 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Q3TQQ9 903 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Psd2Q6P1I6 770 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Olfr299Q7TS05 330 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Ip6k2Q80V72 448 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Arhgap24Q8C4V1 747 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 4921504E06RikQ8CET2 560 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Mgat5Q8R4G6 740 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Smyd2Q8R5A0 433 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Ubxn11Q9D572 484 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 PirQ9D711 290 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Ccdc103Q9D9P2 237 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Tmod4Q9JLH8 345 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Scn1aA2APX8 2009 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Arhgap42B2RQE8 841 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 AlpiF8VPQ6 554 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Spin2fJ3QPU0 254 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 HdcP23738 662 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Sstr3P30935 428 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Clcn3P51791 818 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Nlrc4Q3UP24 1024 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 SnrpaQ62189 287 aaKnown RBP19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Txndc8Q69AB2 127 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Scaf8Q6DID3 1268 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Klhl17Q6TDP3 640 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Q810S2 196 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Pi4kbQ8BKC8 816 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Phactr3Q8BYK5 558 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Znf467Q8JZL0 594 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Angel2Q8K1C0 544 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Snrnp25Q8VIK1 123 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Ddx1Q91VR5 740 aaKnown RBP19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Chst7Q9EP78 484 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Aldh18a1Q9Z110 795 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Ror1Q9Z139 937 aa19.47■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Gm3415J3QMS8 315 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Magea1O89006 320 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Pfkfb2P70265 519 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Zbtb48Q1H9T6 681 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Snx27Q3UHD6 539 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Smcr8Q3UMB5 935 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Trim38Q5SZ99 471 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Sez6lQ6P1D5 963 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Znf426Q8R1D1 550 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Wdr98Q8VC42 657 aa19.46■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms