RNA–Protein interactions for RNA: snR87

snR87, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR87, Length 109 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR87snR87 LSM2P38203 95 aaKnown RBP-4.19□□□□□ -3.08
snR87snR87 YOL097W-AQ3E7Y9 61 aa-4.19□□□□□ -3.08
snR87snR87 YER181CP40097 107 aa-4.2□□□□□ -3.08
snR87snR87 PAU4P53427 120 aa-4.2□□□□□ -3.08
snR87snR87 SNO1Q03144 224 aa-4.2□□□□□ -3.08
snR87snR87 YBR121C-AP0C5L4 52 aa-4.21□□□□□ -3.08
snR87snR87 TDA2P40045 126 aa-4.21□□□□□ -3.08
snR87snR87 YAL065CO13511 128 aa-4.22□□□□□ -3.08
snR87snR87 RPS27BP38711 82 aa-4.22□□□□□ -3.08
snR87snR87 YGR201CP42936 225 aa-4.22□□□□□ -3.08
snR87snR87 ERV25P54837 211 aaKnown RBP-4.22□□□□□ -3.08
snR87snR87 YGR146C-AQ8TGT9 53 aa-4.22□□□□□ -3.08
snR87snR87 YBL071CP38185 102 aa-4.23□□□□□ -3.09
snR87snR87 FRQ1Q06389 190 aa-4.23□□□□□ -3.09
snR87snR87 YNL277W-AQ3E7Z0 62 aa-4.23□□□□□ -3.09
snR87snR87 YIL002W-AQ3E7Z5 69 aa-4.23□□□□□ -3.09
snR87snR87 YOR394C-AQ8TGJ0 55 aa-4.23□□□□□ -3.09
snR87snR87 YLR419WQ06698 1435 aaKnown RBP-4.23□□□□□ -3.09
snR87snR87 RPL30P14120 105 aaKnown RBP-4.24□□□□□ -3.09
snR87snR87 EMC5P40540 141 aa-4.24□□□□□ -3.09
snR87snR87 EGD1Q02642 157 aaKnown RBP-4.24□□□□□ -3.09
snR87snR87 GPI19Q04082 140 aa-4.24□□□□□ -3.09
snR87snR87 YKL183C-AQ3E765 70 aa-4.24□□□□□ -3.09
snR87snR87 ARC19P33204 171 aaKnown RBP-4.25□□□□□ -3.09
snR87snR87 YHL005CP38752 130 aa-4.25□□□□□ -3.09
snR87snR87 PAU15P40585 124 aa-4.25□□□□□ -3.09
snR87snR87 YCR095W-AQ3E787 52 aa-4.25□□□□□ -3.09
snR87snR87 BPT1P14772 1559 aa-4.26□□□□□ -3.09
snR87snR87 MRP49P32388 137 aa-4.26□□□□□ -3.09
snR87snR87 SHG1P38337 142 aa-4.26□□□□□ -3.09
snR87snR87 YHR130CP38834 111 aa-4.26□□□□□ -3.09
snR87snR87 PAU19P0CE85 124 aa-4.27□□□□□ -3.09
snR87snR87 RPL35AP0CX84 120 aaKnown RBP-4.27□□□□□ -3.09
snR87snR87 RPL35BP0CX85 120 aaKnown RBP-4.27□□□□□ -3.09
snR87snR87 PAU3P25610 124 aa-4.27□□□□□ -3.09
snR87snR87 YCR050CP25630 102 aa-4.27□□□□□ -3.09
snR87snR87 RTC3P38804 111 aaPredicted RBP-4.27□□□□□ -3.09
snR87snR87 SRB6P32570 121 aa-4.28□□□□□ -3.09
snR87snR87 MRPL37P36532 105 aa-4.28□□□□□ -3.09
snR87snR87 YOS1Q3E834 85 aa-4.28□□□□□ -3.09
snR87snR87 RFA3P26755 122 aaKnown RBP-4.29□□□□□ -3.1
snR87snR87 SUI1P32911 108 aaKnown RBP-4.29□□□□□ -3.1
snR87snR87 MPC1P53157 130 aaKnown RBP-4.29□□□□□ -3.1
snR87snR87 LSM3P57743 89 aaKnown RBP-4.29□□□□□ -3.1
snR87snR87 YDR042CQ03205 200 aa-4.29□□□□□ -3.1
snR87snR87 PET117Q02771 107 aa-4.3□□□□□ -3.1
snR87snR87 DAD1Q12248 94 aa-4.3□□□□□ -3.1
snR87snR87 KOG1P38873 1557 aa-4.31□□□□□ -3.1
snR87snR87 RPL29P05747 59 aaPredicted RBP-4.31□□□□□ -3.1
snR87snR87 NHP2P32495 156 aaPredicted RBP-4.31□□□□□ -3.1
snR87snR87 NCB2Q92317 146 aa-4.31□□□□□ -3.1
snR87snR87 LHP1P33399 275 aaKnown RBP-4.32□□□□□ -3.1
snR87snR87 POL1P13382 1468 aa-4.32□□□□□ -3.1
snR87snR87 XRN1P22147 1528 aaKnown RBP-4.32□□□□□ -3.1
snR87snR87 PAU16P35994 123 aa-4.33□□□□□ -3.1
snR87snR87 YPL225WQ08971 146 aaKnown RBP-4.33□□□□□ -3.1
snR87snR87 HAP1P0CE41 1502 aa-4.34□□□□□ -3.1
snR87snR87 CHD1P32657 1468 aa-4.35□□□□□ -3.11
snR87snR87 KRE5P22023 1365 aa-4.35□□□□□ -3.11
snR87snR87 HSK3P69852 69 aa-4.35□□□□□ -3.11
snR87snR87 YBR200W-AQ3E755 54 aa-4.36□□□□□ -3.11
snR87snR87 YKL068W-AQ3E826 78 aa-4.37□□□□□ -3.11
snR87snR87 CBF1P17106 351 aa-4.38□□□□□ -3.11
snR87snR87 YOR011W-AQ3E807 68 aa-4.38□□□□□ -3.11
snR87snR87 APC1P53886 1748 aa-4.38□□□□□ -3.11
snR87snR87 CMD1P06787 147 aaKnown RBP-4.39□□□□□ -3.11
snR87snR87 POP7P38291 140 aa-4.39□□□□□ -3.11
snR87snR87 SAE3P89114 91 aa-4.39□□□□□ -3.11
snR87snR87 SPC1P46965 94 aa-4.4□□□□□ -3.11
snR87snR87 ELC1Q03071 99 aa-4.4□□□□□ -3.11
snR87snR87 YDR034C-AP0C289 58 aa-4.41□□□□□ -3.12
snR87snR87 NHP6BP11633 99 aaKnown RBP-4.41□□□□□ -3.12
snR87snR87 YMR103CQ04436 120 aa-4.41□□□□□ -3.12
snR87snR87 YLR053CQ12026 108 aa-4.41□□□□□ -3.12
snR87snR87 BCK1Q01389 1478 aa-4.42□□□□□ -3.12
snR87snR87 YLR146W-AQ2V2P1 62 aa-4.42□□□□□ -3.12
snR87snR87 DNF1P32660 1571 aa-4.43□□□□□ -3.12
snR87snR87 YHR073W-AP0C5N7 58 aa-4.43□□□□□ -3.12
snR87snR87 TRX1P22217 103 aaKnown RBP-4.43□□□□□ -3.12
snR87snR87 FPR2P32472 135 aa-4.43□□□□□ -3.12
snR87snR87 GIM4P40005 111 aaKnown RBP-4.43□□□□□ -3.12
snR87snR87 ATG38Q05789 226 aaKnown RBP-4.43□□□□□ -3.12
snR87snR87 YCL012CQ8J0M4 134 aa-4.43□□□□□ -3.12
snR87snR87 PAU5P43575 122 aa-4.44□□□□□ -3.12
snR87snR87 MRPS17Q03246 237 aaPredicted RBP-4.44□□□□□ -3.12
snR87snR87 YOR376W-AQ3E805 51 aa-4.44□□□□□ -3.12
snR87snR87 QCR7P00128 127 aa-4.45□□□□□ -3.12
snR87snR87 PBI2P0CT04 75 aaKnown RBP-4.46□□□□□ -3.12
snR87snR87 SNU13P39990 126 aaKnown RBP-4.46□□□□□ -3.12
snR87snR87 RCF1Q03713 159 aa-4.46□□□□□ -3.12
snR87snR87 TVP18Q04767 167 aa-4.47□□□□□ -3.13
snR87snR87 ULS1Q08562 1619 aa-4.47□□□□□ -3.13
snR87snR87 SPI1P40092 148 aa-4.48□□□□□ -3.13
snR87snR87 SPC3Q12133 184 aa-4.48□□□□□ -3.13
snR87snR87 YBL039W-BP0C268 59 aa-4.49□□□□□ -3.13
snR87snR87 VMA21P41806 77 aa-4.49□□□□□ -3.13
snR87snR87 YBR230W-AQ3E762 66 aa-4.5□□□□□ -3.13
snR87snR87 YSP2Q06681 1438 aa-4.5□□□□□ -3.13
snR87snR87 ESP1Q03018 1630 aa-4.5□□□□□ -3.13
snR87snR87 DNF2Q12675 1612 aa-4.5□□□□□ -3.13
Retrieved 100 of 5,963 RNA–protein pairs in 61.4 ms