RNA–Protein interactions for RNA: YPR189W

SKI3, Transcript of Ski complex component and TPR protein, yeast

Gene SKI3, Length 4,299 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI3	YPR189W	DSE2	P38844	325 aa		1.01	□□□□□ -2.25
SKI3	YPR189W	YDL012C	Q12489	107 aa		1.01	□□□□□ -2.25
SKI3	YPR189W	Q0017	Q9ZZX8	53 aa		1.01	□□□□□ -2.25
SKI3	YPR189W	YGL010W	P25338	174 aa		1	□□□□□ -2.25
SKI3	YPR189W	PAU2	P32612	120 aa		1	□□□□□ -2.25
SKI3	YPR189W	YER187W	P40102	141 aa		1	□□□□□ -2.25
SKI3	YPR189W	SWC7	Q06707	132 aa		1	□□□□□ -2.25
SKI3	YPR189W	FIT1	Q04433	528 aa		1	□□□□□ -2.25
SKI3	YPR189W	YPL261C	Q08976	102 aa		1	□□□□□ -2.25
SKI3	YPR189W	PCC1	Q3E833	88 aa		1	□□□□□ -2.25
SKI3	YPR189W	PAU24	P38155	120 aa		1	□□□□□ -2.25
SKI3	YPR189W	SNU13	P39990	126 aa	Known RBP	1	□□□□□ -2.25
SKI3	YPR189W	PEP8	P40335	379 aa		1	□□□□□ -2.25
SKI3	YPR189W	GTT1	P40582	234 aa		1	□□□□□ -2.25
SKI3	YPR189W	YIL014C-A	Q02598	104 aa		1	□□□□□ -2.25
SKI3	YPR189W	RPL13B	P40212	199 aa	Known RBP	0.99	□□□□□ -2.25
SKI3	YPR189W	DAN1	P47178	298 aa		0.99	□□□□□ -2.25
SKI3	YPR189W	HRT1	Q08273	121 aa		0.99	□□□□□ -2.25
SKI3	YPR189W	YOS1	Q3E834	85 aa		0.99	□□□□□ -2.25
SKI3	YPR189W	YHL037C	P38733	133 aa		0.99	□□□□□ -2.25
SKI3	YPR189W	COX12	Q01519	83 aa		0.99	□□□□□ -2.25
SKI3	YPR189W	DAD1	Q12248	94 aa		0.99	□□□□□ -2.25
SKI3	YPR189W	PRE1	P22141	198 aa	Known RBP	0.98	□□□□□ -2.25
SKI3	YPR189W	YEL008W	P40001	126 aa		0.98	□□□□□ -2.25
SKI3	YPR189W	HUR1	P45820	110 aa		0.98	□□□□□ -2.25
SKI3	YPR189W	FIT3	Q08907	204 aa		0.98	□□□□□ -2.25
SKI3	YPR189W	COA6	Q3E846	104 aa		0.98	□□□□□ -2.25
SKI3	YPR189W	TAR1	Q8TGM6	124 aa		0.98	□□□□□ -2.25
SKI3	YPR189W	OST5	Q92316	86 aa		0.98	□□□□□ -2.25
SKI3	YPR189W	MRPL11	P36521	249 aa	Predicted RBP	0.98	□□□□□ -2.25
SKI3	YPR189W	YLR194C	Q05777	254 aa		0.98	□□□□□ -2.25
SKI3	YPR189W	SED1	Q01589	338 aa		0.98	□□□□□ -2.25
SKI3	YPR189W	YDR029W	Q12111	104 aa		0.98	□□□□□ -2.25
SKI3	YPR189W	PAU19	P0CE85	124 aa		0.98	□□□□□ -2.25
SKI3	YPR189W	PAU3	P25610	124 aa		0.98	□□□□□ -2.25
SKI3	YPR189W	CDC39	P25655	2108 aa	Known RBP	0.98	□□□□□ -2.25
SKI3	YPR189W	RGM1	Q00453	211 aa		0.98	□□□□□ -2.25
SKI3	YPR189W	YLR296W	Q05898	108 aa		0.98	□□□□□ -2.25
SKI3	YPR189W	YHR086W-A	Q3E746	53 aa		0.98	□□□□□ -2.25
SKI3	YPR189W	RRT15	Q3E811	62 aa		0.98	□□□□□ -2.25
SKI3	YPR189W	RPL36B	O14455	100 aa	Known RBP	0.97	□□□□□ -2.25
SKI3	YPR189W	RPL36A	P05745	100 aa	Predicted RBP	0.97	□□□□□ -2.25
SKI3	YPR189W	RPL22A	P05749	121 aa	Known RBP	0.97	□□□□□ -2.25
SKI3	YPR189W	YDR034C-A	P0C289	58 aa		0.97	□□□□□ -2.25
SKI3	YPR189W	ATG8	P38182	117 aa	RIP-Chip data	0.97	□□□□□ -2.25	not detected
SKI3	YPR189W	COX23	P38824	151 aa		0.97	□□□□□ -2.25
SKI3	YPR189W	SNN1	P48232	102 aa		0.97	□□□□□ -2.25
SKI3	YPR189W	RSM19	P53733	91 aa	Predicted RBP	0.97	□□□□□ -2.25
SKI3	YPR189W	QCR8	P08525	94 aa		0.97	□□□□□ -2.25
SKI3	YPR189W	PMP3	P87284	55 aa		0.97	□□□□□ -2.25
SKI3	YPR189W	SEN15	Q04675	128 aa		0.97	□□□□□ -2.25
SKI3	YPR189W	MSL1	P40567	111 aa	Predicted RBP	0.97	□□□□□ -2.25
SKI3	YPR189W	RPL22B	P56628	122 aa	Known RBP	0.97	□□□□□ -2.25
SKI3	YPR189W	YLR162W	Q06235	118 aa		0.97	□□□□□ -2.25
SKI3	YPR189W	YGL014C-A	P0C5N1	53 aa		0.96	□□□□□ -2.26
SKI3	YPR189W	YHR213W	P0CI67	198 aa		0.96	□□□□□ -2.26
SKI3	YPR189W	HMRA1	P0CY11	126 aa		0.96	□□□□□ -2.26
SKI3	YPR189W	YBR219C	P38317	127 aa		0.96	□□□□□ -2.26
SKI3	YPR189W	VMA21	P41806	77 aa		0.96	□□□□□ -2.26
SKI3	YPR189W	HPA2	Q06592	156 aa		0.96	□□□□□ -2.26
SKI3	YPR189W	YHR212W-A	P0CX91	67 aa		0.96	□□□□□ -2.26
SKI3	YPR189W	PAU16	P35994	123 aa		0.96	□□□□□ -2.26
SKI3	YPR189W	RPS27A	P35997	82 aa	Known RBP	0.96	□□□□□ -2.26
SKI3	YPR189W	YBR027C	P38220	110 aa		0.96	□□□□□ -2.26
SKI3	YPR189W	RPS27B	P38711	82 aa		0.96	□□□□□ -2.26
SKI3	YPR189W	PAU15	P40585	124 aa		0.96	□□□□□ -2.26
SKI3	YPR189W	YPR145C-A	Q2V2P0	78 aa		0.96	□□□□□ -2.26
SKI3	YPR189W	YCL048W-A	Q2V2Q2	79 aa		0.96	□□□□□ -2.26
SKI3	YPR189W	YML054C-A	Q3E809	52 aa		0.96	□□□□□ -2.26
SKI3	YPR189W	BLM10	P43583	2143 aa		0.96	□□□□□ -2.26
SKI3	YPR189W	AIM4	P38305	123 aa	Predicted RBP	0.95	□□□□□ -2.26
SKI3	YPR189W	YDR246W-A	Q3E763	66 aa		0.95	□□□□□ -2.26
SKI3	YPR189W	NRG2	P38082	220 aa		0.95	□□□□□ -2.26
SKI3	YPR189W	LST8	P41318	303 aa		0.95	□□□□□ -2.26
SKI3	YPR189W	VAM10	Q08474	114 aa		0.95	□□□□□ -2.26
SKI3	YPR189W	RPL33A	P05744	107 aa	Known RBP	0.95	□□□□□ -2.26
SKI3	YPR189W	HMRA2	P0CY13	119 aa		0.95	□□□□□ -2.26
SKI3	YPR189W	YLR285C-A	Q3E771	56 aa		0.95	□□□□□ -2.26
SKI3	YPR189W	YGR240C-A	Q3E786	66 aa		0.95	□□□□□ -2.26
SKI3	YPR189W	COA3	Q3E7B2	85 aa		0.95	□□□□□ -2.26
SKI3	YPR189W	COA2	Q3E823	68 aa		0.95	□□□□□ -2.26
SKI3	YPR189W	AIM19	P40502	157 aa		0.94	□□□□□ -2.26
SKI3	YPR189W	ECM12	O13529	151 aa		0.94	□□□□□ -2.26
SKI3	YPR189W	YMR122C	Q03879	124 aa		0.94	□□□□□ -2.26
SKI3	YPR189W	YNL146C-A	Q3E7Z1	64 aa		0.94	□□□□□ -2.26
SKI3	YPR189W	CYR1	P08678	2026 aa	Known RBP	0.94	□□□□□ -2.26
SKI3	YPR189W	YHR138C	P38841	114 aa	Predicted RBP	0.94	□□□□□ -2.26
SKI3	YPR189W	CYB5	P40312	120 aa		0.94	□□□□□ -2.26
SKI3	YPR189W	POR2	P40478	281 aa		0.94	□□□□□ -2.26
SKI3	YPR189W	PAU5	P43575	122 aa		0.94	□□□□□ -2.26
SKI3	YPR189W	YOL131W	Q08270	108 aa		0.94	□□□□□ -2.26
SKI3	YPR189W	NCE101	Q02820	53 aa		0.93	□□□□□ -2.26
SKI3	YPR189W	YDR042C	Q03205	200 aa		0.93	□□□□□ -2.26
SKI3	YPR189W	YHR213W-A	Q8TGT4	77 aa		0.93	□□□□□ -2.26
SKI3	YPR189W	PFY1	P07274	126 aa		0.93	□□□□□ -2.26
SKI3	YPR189W	YIL163C	P40448	117 aa		0.93	□□□□□ -2.26
SKI3	YPR189W	YFL065C	P43539	102 aa		0.93	□□□□□ -2.26
SKI3	YPR189W	RPS22A	P0C0W1	130 aa	Known RBP	0.92	□□□□□ -2.26
SKI3	YPR189W	YDR010C	Q12426	110 aa		0.92	□□□□□ -2.26
SKI3	YPR189W	YLR363W-A	Q3E747	85 aa		0.92	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms