RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W COA3Q3E7B2 85 aa6.69□□□□□ -1.34
MSF1YPR047W YKL070WP36087 169 aa6.68□□□□□ -1.34
MSF1YPR047W RPF1P38805 295 aaKnown RBP6.68□□□□□ -1.34
MSF1YPR047W HMRA2P0CY13 119 aa6.67□□□□□ -1.34
MSF1YPR047W DDR48P18899 430 aaKnown RBP6.67□□□□□ -1.34
MSF1YPR047W YPL073CP40323 161 aa6.67□□□□□ -1.34
MSF1YPR047W AIM19P40502 157 aa6.67□□□□□ -1.34
MSF1YPR047W YKL023C-AQ2V2P3 75 aa6.67□□□□□ -1.34
MSF1YPR047W YAL065CO13511 128 aa6.65□□□□□ -1.35
MSF1YPR047W ECM12O13529 151 aa6.65□□□□□ -1.35
MSF1YPR047W YLR296WQ05898 108 aa6.65□□□□□ -1.35
MSF1YPR047W YIL102C-AQ2V2P5 75 aa6.64□□□□□ -1.35
MSF1YPR047W YGL041C-BQ3E750 60 aa6.64□□□□□ -1.35
MSF1YPR047W YDL241WQ07738 123 aa6.63□□□□□ -1.35
MSF1YPR047W YPL261CQ08976 102 aa6.62□□□□□ -1.35
MSF1YPR047W YBL112CQ3E7Y4 105 aa6.62□□□□□ -1.35
MSF1YPR047W YNL198CP40166 100 aa6.61□□□□□ -1.35
MSF1YPR047W ELC1Q03071 99 aa6.61□□□□□ -1.35
MSF1YPR047W YKR041WP36134 250 aa6.6□□□□□ -1.35
MSF1YPR047W YDR010CQ12426 110 aa6.6□□□□□ -1.35
MSF1YPR047W YDL022C-AP0C5L6 82 aa6.59□□□□□ -1.35
MSF1YPR047W YEL067CP39978 195 aa6.59□□□□□ -1.35
MSF1YPR047W CWP2P43497 92 aa6.59□□□□□ -1.35
MSF1YPR047W AQY2P0CD90 149 aa6.59□□□□□ -1.36
MSF1YPR047W YNR077CP53758 84 aa6.59□□□□□ -1.36
MSF1YPR047W IGO2Q9P305 131 aa6.59□□□□□ -1.36
MSF1YPR047W PAI3P01094 68 aa6.58□□□□□ -1.36
MSF1YPR047W ATP15P21306 62 aa6.58□□□□□ -1.36
MSF1YPR047W AIM11P87275 137 aa6.58□□□□□ -1.36
MSF1YPR047W HYP2P23301 157 aaKnown RBP6.56□□□□□ -1.36
MSF1YPR047W OXA1P39952 402 aa6.56□□□□□ -1.36
MSF1YPR047W YER181CP40097 107 aa6.56□□□□□ -1.36
MSF1YPR047W COX14P39103 70 aa6.55□□□□□ -1.36
MSF1YPR047W EOS1P53938 366 aa6.55□□□□□ -1.36
MSF1YPR047W SMD1Q02260 146 aaPredicted RBP6.54□□□□□ -1.36
MSF1YPR047W Q0032Q9ZZX7 96 aa6.54□□□□□ -1.36
MSF1YPR047W TOA2P32774 122 aa6.52□□□□□ -1.37
MSF1YPR047W POP7P38291 140 aa6.52□□□□□ -1.37
MSF1YPR047W PPT2Q12036 173 aa6.52□□□□□ -1.37
MSF1YPR047W CPR1P14832 162 aaKnown RBP6.51□□□□□ -1.37
MSF1YPR047W SHU1P38751 150 aa6.51□□□□□ -1.37
MSF1YPR047W PEX17P40155 199 aa6.51□□□□□ -1.37
MSF1YPR047W STF1P01098 86 aa6.5□□□□□ -1.37
MSF1YPR047W YFR057WP43625 151 aa6.5□□□□□ -1.37
MSF1YPR047W ABF2Q02486 183 aa6.5□□□□□ -1.37
MSF1YPR047W ADH1P00330 348 aaKnown RBP6.49□□□□□ -1.37
MSF1YPR047W ARO2P28777 376 aaKnown RBP6.49□□□□□ -1.37
MSF1YPR047W RUB1Q03919 77 aa6.49□□□□□ -1.37
MSF1YPR047W YLR415CO13578 112 aa6.48□□□□□ -1.37
MSF1YPR047W MVB12P42939 101 aa6.48□□□□□ -1.37
MSF1YPR047W YFL019CP43576 117 aa6.48□□□□□ -1.37
MSF1YPR047W YGL149WP53116 101 aa6.48□□□□□ -1.37
MSF1YPR047W MRPS12P53732 153 aa6.48□□□□□ -1.37
MSF1YPR047W LSM6Q06406 86 aaKnown RBP6.48□□□□□ -1.37
MSF1YPR047W YBL039W-BP0C268 59 aa6.47□□□□□ -1.37
MSF1YPR047W RPL18AP0CX49 186 aaKnown RBP6.47□□□□□ -1.37
MSF1YPR047W RPL18BP0CX50 186 aaKnown RBP6.47□□□□□ -1.37
MSF1YPR047W RPL28P02406 149 aaKnown RBP6.45□□□□□ -1.38
MSF1YPR047W QCR8P08525 94 aa6.45□□□□□ -1.38
MSF1YPR047W UGX2P32772 223 aa6.45□□□□□ -1.38
MSF1YPR047W IGD1P43598 195 aa6.45□□□□□ -1.38
MSF1YPR047W YGL193CP53097 103 aa6.45□□□□□ -1.38
MSF1YPR047W NHP2P32495 156 aaPredicted RBP6.44□□□□□ -1.38
MSF1YPR047W DUT1P33317 147 aa6.44□□□□□ -1.38
MSF1YPR047W YPL257WQ08974 193 aa6.43□□□□□ -1.38
MSF1YPR047W YLR156WP0CE96 114 aa6.42□□□□□ -1.38
MSF1YPR047W YLR159WP0CE97 114 aa6.42□□□□□ -1.38
MSF1YPR047W YLR161WP0CE98 114 aa6.42□□□□□ -1.38
MSF1YPR047W CDC43P18898 376 aa6.42□□□□□ -1.38
MSF1YPR047W SLO1Q3E784 85 aa6.42□□□□□ -1.38
MSF1YPR047W YIL002W-AQ3E7Z5 69 aa6.42□□□□□ -1.38
MSF1YPR047W KNH1P50112 268 aa6.41□□□□□ -1.38
MSF1YPR047W YNL190WP53872 204 aa6.41□□□□□ -1.38
MSF1YPR047W MID2P36027 376 aa6.37□□□□□ -1.39
MSF1YPR047W HPA2Q06592 156 aa6.37□□□□□ -1.39
MSF1YPR047W YLL006W-AQ3E814 58 aa6.37□□□□□ -1.39
MSF1YPR047W YHR130CP38834 111 aa6.36□□□□□ -1.39
MSF1YPR047W YOR268CQ08734 132 aa6.36□□□□□ -1.39
MSF1YPR047W COX10P21592 462 aa6.34□□□□□ -1.39
MSF1YPR047W OST2P46964 130 aa6.34□□□□□ -1.39
MSF1YPR047W YER039C-AP0CD97 72 aa6.33□□□□□ -1.4
MSF1YPR047W ATX1P38636 73 aa6.33□□□□□ -1.4
MSF1YPR047W RPL29P05747 59 aaPredicted RBP6.33□□□□□ -1.4
MSF1YPR047W UBC4P15731 148 aa6.33□□□□□ -1.4
MSF1YPR047W EDC2P40023 145 aaPredicted RBP6.33□□□□□ -1.4
MSF1YPR047W YIA6P40556 373 aa6.33□□□□□ -1.4
MSF1YPR047W RPA12P32529 125 aaKnown RBP6.32□□□□□ -1.4
MSF1YPR047W UBC11P52492 156 aa6.32□□□□□ -1.4
MSF1YPR047W RGM1Q00453 211 aa6.32□□□□□ -1.4
MSF1YPR047W YOR020W-AQ3E824 90 aa6.31□□□□□ -1.4
MSF1YPR047W KTI11Q3E840 82 aa6.29□□□□□ -1.4
MSF1YPR047W HUR1P45820 110 aa6.28□□□□□ -1.4
MSF1YPR047W YNL162W-AQ3E7A8 72 aa6.28□□□□□ -1.4
MSF1YPR047W MRPL24P36525 258 aaPredicted RBP6.27□□□□□ -1.41
MSF1YPR047W SPG1P50088 95 aa6.27□□□□□ -1.41
MSF1YPR047W YCR085WP25650 117 aa6.26□□□□□ -1.41
MSF1YPR047W DDR2P89113 61 aa6.26□□□□□ -1.41
MSF1YPR047W INO4P13902 151 aa6.25□□□□□ -1.41
MSF1YPR047W DSE2P38844 325 aa6.25□□□□□ -1.41
MSF1YPR047W YJR085CP47131 105 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 53.5 ms