RNA–Protein interactions for RNA: YPR010C

RPA135, Transcript of RNA polymerase I second largest subunit A135, yeastyeast

Gene RPA135, Length 3,612 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA135YPR010C TRP1P00912 224 aa2.51□□□□□ -2.01
RPA135YPR010C INO4P13902 151 aa2.51□□□□□ -2.01
RPA135YPR010C ARC15P40518 154 aaRIP-Chip data2.51□□□□□ -2.01not detected
RPA135YPR010C COA3Q3E7B2 85 aa2.51□□□□□ -2.01
RPA135YPR010C YDR274CP87283 123 aa2.5□□□□□ -2.01
RPA135YPR010C COF1Q03048 143 aaKnown RBP2.5□□□□□ -2.01
RPA135YPR010C SHH4Q06236 168 aa2.5□□□□□ -2.01
RPA135YPR010C CCW12Q12127 133 aa2.5□□□□□ -2.01
RPA135YPR010C YIR021W-AQ3E739 70 aa2.5□□□□□ -2.01
RPA135YPR010C RRT15Q3E811 62 aa2.5□□□□□ -2.01
RPA135YPR010C YKL044WP36092 106 aa2.5□□□□□ -2.01
RPA135YPR010C SFT1P43682 97 aa2.5□□□□□ -2.01
RPA135YPR010C TOS6P48560 102 aa2.5□□□□□ -2.01
RPA135YPR010C COX12Q01519 83 aa2.5□□□□□ -2.01
RPA135YPR010C RDS3Q06835 107 aaPredicted RBP2.5□□□□□ -2.01
RPA135YPR010C CRC1Q12289 327 aa2.5□□□□□ -2.01
RPA135YPR010C YEL067CP39978 195 aa2.49□□□□□ -2.01
RPA135YPR010C YNL198CP40166 100 aa2.49□□□□□ -2.01
RPA135YPR010C MRPL24P36525 258 aaPredicted RBP2.49□□□□□ -2.01
RPA135YPR010C YAL064WP39711 94 aa2.49□□□□□ -2.01
RPA135YPR010C YJR146WP47174 117 aa2.49□□□□□ -2.01
RPA135YPR010C MGR2Q02889 113 aa2.49□□□□□ -2.01
RPA135YPR010C RPS8AP0CX39 200 aaKnown RBP2.49□□□□□ -2.01
RPA135YPR010C RPS8BP0CX40 200 aaKnown RBP2.49□□□□□ -2.01
RPA135YPR010C SNA2P56508 79 aa2.49□□□□□ -2.01
RPA135YPR010C SGF11Q03067 99 aa2.49□□□□□ -2.01
RPA135YPR010C YLR112WQ12130 139 aa2.49□□□□□ -2.01
RPA135YPR010C SHU1P38751 150 aa2.48□□□□□ -2.01
RPA135YPR010C KRE9P39005 276 aa2.48□□□□□ -2.01
RPA135YPR010C YMR295CQ03559 197 aa2.48□□□□□ -2.01
RPA135YPR010C YAL063C-AQ3E791 96 aa2.48□□□□□ -2.01
RPA135YPR010C YOR376W-AQ3E805 51 aa2.48□□□□□ -2.01
RPA135YPR010C YNR077CP53758 84 aa2.48□□□□□ -2.01
RPA135YPR010C HPA2Q06592 156 aa2.48□□□□□ -2.01
RPA135YPR010C PBA1Q05778 276 aa2.48□□□□□ -2.01
RPA135YPR010C YLR281CQ05863 155 aa2.48□□□□□ -2.01
RPA135YPR010C YOR097CQ12274 175 aaPredicted RBP2.48□□□□□ -2.01
RPA135YPR010C YAR023CD6VPM8 179 aa2.47□□□□□ -2.01
RPA135YPR010C MBF1O14467 151 aaKnown RBP2.47□□□□□ -2.01
RPA135YPR010C YIL102C-AQ2V2P5 75 aa2.47□□□□□ -2.01
RPA135YPR010C YFR032C-BQ8TGU2 87 aa2.47□□□□□ -2.01
RPA135YPR010C ATX1P38636 73 aa2.47□□□□□ -2.01
RPA135YPR010C YIA6P40556 373 aa2.47□□□□□ -2.01
RPA135YPR010C PPT2Q12036 173 aa2.47□□□□□ -2.01
RPA135YPR010C YPR170W-BP0C5R9 85 aa2.46□□□□□ -2.02
RPA135YPR010C HUR1P45820 110 aa2.46□□□□□ -2.02
RPA135YPR010C CPR1P14832 162 aaKnown RBP2.46□□□□□ -2.02
RPA135YPR010C YHR130CP38834 111 aa2.46□□□□□ -2.02
RPA135YPR010C SPI1P40092 148 aa2.46□□□□□ -2.02
RPA135YPR010C LSM6Q06406 86 aaKnown RBP2.46□□□□□ -2.02
RPA135YPR010C ENV10Q99382 181 aa2.46□□□□□ -2.02
RPA135YPR010C OST2P46964 130 aa2.46□□□□□ -2.02
RPA135YPR010C YBR219CP38317 127 aa2.45□□□□□ -2.02
RPA135YPR010C VAM10Q08474 114 aa2.45□□□□□ -2.02
RPA135YPR010C CWP2P43497 92 aa2.44□□□□□ -2.02
RPA135YPR010C RPL38P49167 78 aaKnown RBP2.44□□□□□ -2.02
RPA135YPR010C Q0032Q9ZZX7 96 aa2.44□□□□□ -2.02
RPA135YPR010C PBI2P0CT04 75 aaKnown RBP2.44□□□□□ -2.02
RPA135YPR010C YAR029WP39549 74 aa2.44□□□□□ -2.02
RPA135YPR010C YMR122W-AQ3E842 84 aa2.44□□□□□ -2.02
RPA135YPR010C RPA12P32529 125 aaKnown RBP2.44□□□□□ -2.02
RPA135YPR010C SKI6P46948 246 aaPredicted RBP2.44□□□□□ -2.02
RPA135YPR010C YLL006W-AQ3E814 58 aa2.44□□□□□ -2.02
RPA135YPR010C AIM19P40502 157 aa2.43□□□□□ -2.02
RPA135YPR010C ISD11Q6Q560 94 aa2.43□□□□□ -2.02
RPA135YPR010C QCR8P08525 94 aa2.43□□□□□ -2.02
RPA135YPR010C UBC5P15732 148 aa2.43□□□□□ -2.02
RPA135YPR010C EDC2P40023 145 aaPredicted RBP2.43□□□□□ -2.02
RPA135YPR010C RPR2P40571 144 aa2.43□□□□□ -2.02
RPA135YPR010C AQY2P0CD90 149 aa2.43□□□□□ -2.02
RPA135YPR010C ERI1P62651 68 aaKnown RBP2.43□□□□□ -2.02
RPA135YPR010C COX10P21592 462 aa2.42□□□□□ -2.02
RPA135YPR010C YPR195CQ06594 109 aa2.42□□□□□ -2.02
RPA135YPR010C YGR240C-AQ3E786 66 aa2.42□□□□□ -2.02
RPA135YPR010C RAD6P06104 172 aa2.42□□□□□ -2.02
RPA135YPR010C YFL019CP43576 117 aa2.42□□□□□ -2.02
RPA135YPR010C KNH1P50112 268 aa2.42□□□□□ -2.02
RPA135YPR010C TSC3Q3E790 80 aa2.42□□□□□ -2.02
RPA135YPR010C SPC1P46965 94 aa2.42□□□□□ -2.02
RPA135YPR010C YGR039WP53225 103 aa2.42□□□□□ -2.02
RPA135YPR010C YNL277W-AQ3E7Z0 62 aa2.42□□□□□ -2.02
RPA135YPR010C SMP1P38128 452 aa2.41□□□□□ -2.02
RPA135YPR010C MVB12P42939 101 aa2.41□□□□□ -2.02
RPA135YPR010C YJR085CP47131 105 aaKnown RBP2.41□□□□□ -2.02
RPA135YPR010C YLR296WQ05898 108 aa2.41□□□□□ -2.02
RPA135YPR010C FYV12Q08559 129 aa2.41□□□□□ -2.02
RPA135YPR010C COX14P39103 70 aa2.41□□□□□ -2.02
RPA135YPR010C YOR020W-AQ3E824 90 aa2.41□□□□□ -2.02
RPA135YPR010C TDA8Q6B2U8 126 aa2.41□□□□□ -2.02
RPA135YPR010C YFL065CP43539 102 aa2.4□□□□□ -2.02
RPA135YPR010C YPR203WQ08994 102 aa2.4□□□□□ -2.02
RPA135YPR010C MSA2P36157 363 aa2.4□□□□□ -2.03
RPA135YPR010C MPC3P53311 146 aa2.4□□□□□ -2.03
RPA135YPR010C MRPS12P53732 153 aa2.4□□□□□ -2.03
RPA135YPR010C RTC6O14464 93 aa2.4□□□□□ -2.03
RPA135YPR010C DDR48P18899 430 aaKnown RBP2.4□□□□□ -2.03
RPA135YPR010C RGM1Q00453 211 aa2.4□□□□□ -2.03
RPA135YPR010C YDR029WQ12111 104 aa2.39□□□□□ -2.03
RPA135YPR010C YMR175W-AQ3E766 64 aa2.38□□□□□ -2.03
RPA135YPR010C YJR107C-AP0CT86 78 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 65.8 ms