RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	YOL164W-A	Q3E7A5	60 aa		1	□□□□□ -2.25
CAF20	YOR276W	SNU13	P39990	126 aa	Known RBP	0.99	□□□□□ -2.25
CAF20	YOR276W	PAU4	P53427	120 aa		0.99	□□□□□ -2.25
CAF20	YOR276W	ESC1	Q03661	1658 aa	Known RBP	0.98	□□□□□ -2.25
CAF20	YOR276W	DNF3	Q12674	1656 aa		0.98	□□□□□ -2.25
CAF20	YOR276W	RPA12	P32529	125 aa	Known RBP	0.96	□□□□□ -2.26
CAF20	YOR276W	ECM12	O13529	151 aa		0.95	□□□□□ -2.26
CAF20	YOR276W	YNL190W	P53872	204 aa		0.95	□□□□□ -2.26
CAF20	YOR276W	RPS29B	P41058	56 aa	Known RBP	0.94	□□□□□ -2.26
CAF20	YOR276W	YGL194C-A	Q2V2P6	80 aa		0.94	□□□□□ -2.26
CAF20	YOR276W	NHP2	P32495	156 aa	Predicted RBP	0.93	□□□□□ -2.26
CAF20	YOR276W	BSC4	P53841	131 aa		0.93	□□□□□ -2.26
CAF20	YOR276W	MHF2	Q3E829	80 aa		0.92	□□□□□ -2.26
CAF20	YOR276W	TY1B-PR2	P0C2J0	1756 aa		0.92	□□□□□ -2.26
CAF20	YOR276W	ECM29	P38737	1868 aa		0.92	□□□□□ -2.26
CAF20	YOR276W	LTE1	P07866	1435 aa		0.91	□□□□□ -2.26
CAF20	YOR276W	SKI3	P17883	1432 aa	Known RBP	0.91	□□□□□ -2.26
CAF20	YOR276W	TY1B-DR6	P0C2I3	1755 aa		0.91	□□□□□ -2.26
CAF20	YOR276W	TY1B-LR2	P0C2I5	1755 aa		0.91	□□□□□ -2.26
CAF20	YOR276W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	0.91	□□□□□ -2.26
CAF20	YOR276W	TY1B-JR2	P47100	1755 aa	Known RBP	0.91	□□□□□ -2.26
CAF20	YOR276W	TY1B-MR1	Q04214	1755 aa		0.91	□□□□□ -2.26
CAF20	YOR276W	TY1B-MR2	Q04670	1755 aa	Known RBP	0.91	□□□□□ -2.26
CAF20	YOR276W	TY1B-NL1	Q12112	1755 aa		0.91	□□□□□ -2.26
CAF20	YOR276W	TY1B-GR1	Q12141	1755 aa		0.91	□□□□□ -2.26
CAF20	YOR276W	TY1B-GR3	Q12316	1755 aa		0.91	□□□□□ -2.26
CAF20	YOR276W	TY1B-PL	Q12414	1755 aa	Known RBP	0.91	□□□□□ -2.26
CAF20	YOR276W	TY1B-OR	Q92393	1755 aa		0.91	□□□□□ -2.26
CAF20	YOR276W	RPC10	P40422	70 aa		0.91	□□□□□ -2.26
CAF20	YOR276W	SCP1	Q08873	200 aa		0.91	□□□□□ -2.26
CAF20	YOR276W	YMR175W-A	Q3E766	64 aa		0.91	□□□□□ -2.26
CAF20	YOR276W	YNL042W-B	Q3E7Z2	85 aa		0.91	□□□□□ -2.26
CAF20	YOR276W	YSP2	Q06681	1438 aa		0.9	□□□□□ -2.26
CAF20	YOR276W	Q0032	Q9ZZX7	96 aa		0.88	□□□□□ -2.27
CAF20	YOR276W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	0.87	□□□□□ -2.27
CAF20	YOR276W	MOT1	P32333	1867 aa		0.86	□□□□□ -2.27
CAF20	YOR276W	YBR201C-A	Q2V2Q3	67 aa		0.86	□□□□□ -2.27
CAF20	YOR276W	COX7	P10174	60 aa		0.85	□□□□□ -2.27
CAF20	YOR276W	YNL198C	P40166	100 aa		0.85	□□□□□ -2.27
CAF20	YOR276W	UTP10	P42945	1769 aa	Known RBP	0.83	□□□□□ -2.28
CAF20	YOR276W	PDX3	P38075	228 aa	Known RBP	0.83	□□□□□ -2.28
CAF20	YOR276W	RPL38	P49167	78 aa	Known RBP	0.83	□□□□□ -2.28
CAF20	YOR276W	YMR122W-A	Q3E842	84 aa		0.83	□□□□□ -2.28
CAF20	YOR276W	YAL065C	O13511	128 aa		0.82	□□□□□ -2.28
CAF20	YOR276W	STT4	P37297	1900 aa		0.81	□□□□□ -2.28
CAF20	YOR276W	YOR343C	Q12484	108 aa		0.8	□□□□□ -2.28
CAF20	YOR276W	YJR107C-A	P0CT86	78 aa		0.79	□□□□□ -2.28
CAF20	YOR276W	FPR2	P32472	135 aa		0.79	□□□□□ -2.28
CAF20	YOR276W	PAU23	Q07987	124 aa		0.79	□□□□□ -2.28
CAF20	YOR276W	PAU17	Q12370	124 aa		0.79	□□□□□ -2.28
CAF20	YOR276W	TY1B-DR5	P0C2I2	1755 aa		0.78	□□□□□ -2.28
CAF20	YOR276W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	0.78	□□□□□ -2.28
CAF20	YOR276W	TY1B-JR1	P47098	1755 aa		0.78	□□□□□ -2.28
CAF20	YOR276W	TY1B-ML2	Q03434	1755 aa	Known RBP	0.78	□□□□□ -2.28
CAF20	YOR276W	TY1B-ER1	Q03612	1755 aa		0.78	□□□□□ -2.28
CAF20	YOR276W	TY1B-ER2	Q03619	1755 aa		0.78	□□□□□ -2.28
CAF20	YOR276W	TY1B-DR1	Q03855	1755 aa		0.78	□□□□□ -2.28
CAF20	YOR276W	TY1B-ML1	Q04711	1755 aa	Known RBP	0.78	□□□□□ -2.28
CAF20	YOR276W	TY1B-LR1	Q12088	1755 aa	Known RBP	0.78	□□□□□ -2.28
CAF20	YOR276W	TY1B-GR2	Q12269	1755 aa		0.78	□□□□□ -2.28
CAF20	YOR276W	TY1B-OL	Q12273	1755 aa		0.78	□□□□□ -2.28
CAF20	YOR276W	TY1B-DR3	Q99231	1755 aa		0.78	□□□□□ -2.28
CAF20	YOR276W	YHR214C-D	P0CX93	97 aa		0.78	□□□□□ -2.28
CAF20	YOR276W	TOM6	P33448	61 aa		0.78	□□□□□ -2.28
CAF20	YOR276W	YBR016W	P38216	128 aa		0.77	□□□□□ -2.29
CAF20	YOR276W	XRN1	P22147	1528 aa	Known RBP	0.77	□□□□□ -2.29
CAF20	YOR276W	HKR1	P41809	1802 aa		0.77	□□□□□ -2.29
CAF20	YOR276W	MLP1	Q02455	1875 aa	Known RBP	0.76	□□□□□ -2.29
CAF20	YOR276W	CWP2	P43497	92 aa		0.76	□□□□□ -2.29
CAF20	YOR276W	ATP18	P81450	59 aa		0.76	□□□□□ -2.29
CAF20	YOR276W	POC4	Q12245	148 aa	Predicted RBP	0.76	□□□□□ -2.29
CAF20	YOR276W	ESP1	Q03018	1630 aa		0.75	□□□□□ -2.29
CAF20	YOR276W	NOP10	Q6Q547	58 aa	Predicted RBP	0.75	□□□□□ -2.29
CAF20	YOR276W	YCR085W	P25650	117 aa		0.74	□□□□□ -2.29
CAF20	YOR276W	YFR009W-A	P0C5M9	85 aa		0.73	□□□□□ -2.29
CAF20	YOR276W	YIL156W-B	Q2V2P4	73 aa		0.73	□□□□□ -2.29
CAF20	YOR276W	YPR145C-A	Q2V2P0	78 aa		0.7	□□□□□ -2.3
CAF20	YOR276W	SDH6	Q3E785	79 aa		0.7	□□□□□ -2.3
CAF20	YOR276W	YKL068W-A	Q3E826	78 aa		0.7	□□□□□ -2.3
CAF20	YOR276W	YOR105W	Q08504	108 aa		0.68	□□□□□ -2.3
CAF20	YOR276W	MMS22	Q06164	1454 aa		0.67	□□□□□ -2.3
CAF20	YOR276W	MON2	P48563	1636 aa	Predicted RBP	0.67	□□□□□ -2.3
CAF20	YOR276W	PMD1	P32634	1753 aa		0.66	□□□□□ -2.3
CAF20	YOR276W	YOR314W	Q12506	109 aa		0.66	□□□□□ -2.3
CAF20	YOR276W	YKL065W-A	Q2V2P2	73 aa		0.66	□□□□□ -2.3
CAF20	YOR276W	TY2B-C	P25384	1770 aa		0.65	□□□□□ -2.31
CAF20	YOR276W	TY2B-DR1	Q12472	1770 aa		0.65	□□□□□ -2.31
CAF20	YOR276W	TAO3	P40468	2376 aa		0.64	□□□□□ -2.31
CAF20	YOR276W	ATX1	P38636	73 aa		0.64	□□□□□ -2.31
CAF20	YOR276W	YDR381C-A	Q3E6R5	114 aa		0.64	□□□□□ -2.31
CAF20	YOR276W	YOL097W-A	Q3E7Y9	61 aa		0.64	□□□□□ -2.31
CAF20	YOR276W	YIL134C-A	Q45U18	67 aa		0.64	□□□□□ -2.31
CAF20	YOR276W	KOG1	P38873	1557 aa		0.64	□□□□□ -2.31
CAF20	YOR276W	BPH1	P25356	2167 aa		0.62	□□□□□ -2.31
CAF20	YOR276W	YPR108W-A	Q3E7B3	70 aa		0.62	□□□□□ -2.31
CAF20	YOR276W	SIN3	P22579	1536 aa		0.62	□□□□□ -2.31
CAF20	YOR276W	TCB3	Q03640	1545 aa	Known RBP	0.62	□□□□□ -2.31
CAF20	YOR276W	SGF11	Q03067	99 aa		0.61	□□□□□ -2.31
CAF20	YOR276W	YDL022C-A	P0C5L6	82 aa		0.6	□□□□□ -2.31
CAF20	YOR276W	MMS1	Q06211	1407 aa		0.6	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms