RNA–Protein interactions for RNA: YOR140W

SFL1, Transcript of Transcriptional repressor and activator, yeastyeast

Gene SFL1, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFL1YOR140W YMR175W-AQ3E766 64 aa6.5□□□□□ -1.37
SFL1YOR140W YNL146C-AQ3E7Z1 64 aa6.5□□□□□ -1.37
SFL1YOR140W MIG3P39943 394 aa6.49□□□□□ -1.37
SFL1YOR140W YGL118CP53132 145 aa6.49□□□□□ -1.37
SFL1YOR140W YPL038W-AQ3E7B4 63 aa6.49□□□□□ -1.37
SFL1YOR140W MIC10Q96VH5 97 aa6.49□□□□□ -1.37
SFL1YOR140W YER181CP40097 107 aa6.48□□□□□ -1.37
SFL1YOR140W DYN1P36022 4092 aa6.48□□□□□ -1.37
SFL1YOR140W YMR244WQ04018 355 aa6.48□□□□□ -1.37
SFL1YOR140W CCW12Q12127 133 aa6.48□□□□□ -1.37
SFL1YOR140W EMC6Q12431 108 aa6.48□□□□□ -1.37
SFL1YOR140W YHR139C-AO13536 103 aa6.47□□□□□ -1.37
SFL1YOR140W COX12Q01519 83 aa6.46□□□□□ -1.38
SFL1YOR140W SMD1Q02260 146 aaPredicted RBP6.46□□□□□ -1.38
SFL1YOR140W YBR200W-AQ3E755 54 aa6.45□□□□□ -1.38
SFL1YOR140W SKI6P46948 246 aaPredicted RBP6.44□□□□□ -1.38
SFL1YOR140W YGL034CP53186 121 aa6.44□□□□□ -1.38
SFL1YOR140W YPR053CQ6Q5F3 151 aa6.44□□□□□ -1.38
SFL1YOR140W MRPS8Q03799 155 aa6.44□□□□□ -1.38
SFL1YOR140W RPL16AP26784 199 aaKnown RBP6.43□□□□□ -1.38
SFL1YOR140W SPT4P32914 102 aaPredicted RBP6.43□□□□□ -1.38
SFL1YOR140W YFL019CP43576 117 aa6.43□□□□□ -1.38
SFL1YOR140W YDR381C-AQ3E6R5 114 aa6.43□□□□□ -1.38
SFL1YOR140W RPL16BP26785 198 aaKnown RBP6.42□□□□□ -1.38
SFL1YOR140W PEX17P40155 199 aa6.42□□□□□ -1.38
SFL1YOR140W HAL1Q01766 294 aa6.42□□□□□ -1.38
SFL1YOR140W KEG1P43614 200 aa6.42□□□□□ -1.38
SFL1YOR140W MET32Q12041 191 aa6.42□□□□□ -1.38
SFL1YOR140W Q0255P03881 472 aa6.41□□□□□ -1.38
SFL1YOR140W LSM6Q06406 86 aaKnown RBP6.41□□□□□ -1.38
SFL1YOR140W YNL217WP40152 326 aa6.4□□□□□ -1.38
SFL1YOR140W RSM19P53733 91 aaPredicted RBP6.4□□□□□ -1.38
SFL1YOR140W MGR2Q02889 113 aa6.39□□□□□ -1.39
SFL1YOR140W TSC3Q3E790 80 aa6.39□□□□□ -1.39
SFL1YOR140W YGR035W-AQ45U48 73 aa6.39□□□□□ -1.39
SFL1YOR140W YOR268CQ08734 132 aa6.38□□□□□ -1.39
SFL1YOR140W YLR112WQ12130 139 aa6.38□□□□□ -1.39
SFL1YOR140W DSE2P38844 325 aa6.38□□□□□ -1.39
SFL1YOR140W MPC2P38857 129 aa6.38□□□□□ -1.39
SFL1YOR140W PFY1P07274 126 aa6.37□□□□□ -1.39
SFL1YOR140W YBR144CP34215 104 aa6.37□□□□□ -1.39
SFL1YOR140W HTL1Q9URQ5 78 aa6.37□□□□□ -1.39
SFL1YOR140W APS1P35181 156 aa6.36□□□□□ -1.39
SFL1YOR140W YER187WP40102 141 aa6.36□□□□□ -1.39
SFL1YOR140W YBR182C-AQ8TGU6 64 aa6.36□□□□□ -1.39
SFL1YOR140W HMRA2P0CY13 119 aa6.35□□□□□ -1.39
SFL1YOR140W RPL11BQ3E757 174 aaPredicted RBP6.35□□□□□ -1.39
SFL1YOR140W YKL044WP36092 106 aa6.34□□□□□ -1.39
SFL1YOR140W RPL42AP0CX27 106 aaKnown RBP6.34□□□□□ -1.39
SFL1YOR140W RPL42BP0CX28 106 aaKnown RBP6.34□□□□□ -1.39
SFL1YOR140W DCV1P43595 202 aa6.34□□□□□ -1.39
SFL1YOR140W YGL088WP53151 121 aa6.34□□□□□ -1.39
SFL1YOR140W YDR274CP87283 123 aa6.34□□□□□ -1.39
SFL1YOR140W YPL261CQ08976 102 aa6.33□□□□□ -1.4
SFL1YOR140W YDL022C-AP0C5L6 82 aa6.33□□□□□ -1.4
SFL1YOR140W TOS6P48560 102 aa6.32□□□□□ -1.4
SFL1YOR140W YMR295CQ03559 197 aa6.32□□□□□ -1.4
SFL1YOR140W ICY1Q04329 127 aa6.32□□□□□ -1.4
SFL1YOR140W COA3Q3E7B2 85 aa6.32□□□□□ -1.4
SFL1YOR140W TDA8Q6B2U8 126 aa6.32□□□□□ -1.4
SFL1YOR140W RPS11AP0CX47 156 aaKnown RBP6.32□□□□□ -1.4
SFL1YOR140W RPS11BP0CX48 156 aaKnown RBP6.32□□□□□ -1.4
SFL1YOR140W TDA2P40045 126 aa6.31□□□□□ -1.4
SFL1YOR140W ICS3P47034 131 aa6.3□□□□□ -1.4
SFL1YOR140W YCR001WP25347 104 aa6.3□□□□□ -1.4
SFL1YOR140W YSY6P38374 65 aa6.29□□□□□ -1.4
SFL1YOR140W YAL064WP39711 94 aa6.29□□□□□ -1.4
SFL1YOR140W YIA6P40556 373 aa6.28□□□□□ -1.4
SFL1YOR140W YJR146WP47174 117 aa6.28□□□□□ -1.4
SFL1YOR140W AIR2Q12476 344 aaKnown RBP6.28□□□□□ -1.4
SFL1YOR140W YOR008C-AQ3E7B9 74 aa6.28□□□□□ -1.4
SFL1YOR140W RPL11AP0C0W9 174 aaKnown RBP6.28□□□□□ -1.4
SFL1YOR140W YBR209WP38311 105 aa6.28□□□□□ -1.4
SFL1YOR140W YEL067CP39978 195 aa6.28□□□□□ -1.4
SFL1YOR140W YGL193CP53097 103 aa6.28□□□□□ -1.4
SFL1YOR140W YPS5P53057 165 aa6.27□□□□□ -1.41
SFL1YOR140W YML100W-AQ8TGT0 57 aa6.27□□□□□ -1.41
SFL1YOR140W KRE9P39005 276 aa6.26□□□□□ -1.41
SFL1YOR140W RSM18P40033 138 aa6.26□□□□□ -1.41
SFL1YOR140W DDR48P18899 430 aaKnown RBP6.25□□□□□ -1.41
SFL1YOR140W ATP15P21306 62 aa6.25□□□□□ -1.41
SFL1YOR140W YEL045CP32616 141 aa6.24□□□□□ -1.41
SFL1YOR140W URM1P40554 99 aaPredicted RBP6.23□□□□□ -1.41
SFL1YOR140W YNR077CP53758 84 aa6.22□□□□□ -1.41
SFL1YOR140W VTC1P40046 129 aaRIP-Chip data6.22□□□□□ -1.41not detected
SFL1YOR140W RPL26AP05743 127 aaKnown RBP6.21□□□□□ -1.41
SFL1YOR140W PBA1Q05778 276 aa6.21□□□□□ -1.41
SFL1YOR140W RDS3Q06835 107 aaPredicted RBP6.21□□□□□ -1.41
SFL1YOR140W PPT2Q12036 173 aa6.21□□□□□ -1.41
SFL1YOR140W YEL008WP40001 126 aa6.21□□□□□ -1.42
SFL1YOR140W YOR381W-AQ3E804 55 aa6.21□□□□□ -1.42
SFL1YOR140W RPL32P38061 130 aaKnown RBP6.2□□□□□ -1.42
SFL1YOR140W HUR1P45820 110 aa6.19□□□□□ -1.42
SFL1YOR140W PMP3P87284 55 aa6.19□□□□□ -1.42
SFL1YOR140W RPS8AP0CX39 200 aaKnown RBP6.19□□□□□ -1.42
SFL1YOR140W RPS8BP0CX40 200 aaKnown RBP6.19□□□□□ -1.42
SFL1YOR140W ERI1P62651 68 aaKnown RBP6.17□□□□□ -1.42
SFL1YOR140W YDR246W-AQ3E763 66 aa6.17□□□□□ -1.42
SFL1YOR140W CRC1Q12289 327 aa6.17□□□□□ -1.42
SFL1YOR140W AIM4P38305 123 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 54.8 ms