RNA–Protein interactions for RNA: YOL004W

SIN3, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene SIN3, Length 4,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIN3YOL004W FEX2Q08991 375 aa1.88□□□□□ -2.11
SIN3YOL004W SOM1Q05676 74 aa1.88□□□□□ -2.11
SIN3YOL004W YOR268CQ08734 132 aa1.88□□□□□ -2.11
SIN3YOL004W COX9P07255 59 aa1.87□□□□□ -2.11
SIN3YOL004W ERV15P38312 142 aa1.87□□□□□ -2.11
SIN3YOL004W YGR269WP40326 108 aa1.87□□□□□ -2.11
SIN3YOL004W DOC1P53068 250 aa1.87□□□□□ -2.11
SIN3YOL004W NAT5Q08689 176 aa1.87□□□□□ -2.11
SIN3YOL004W YLR236CA0A023PZG4 107 aa1.87□□□□□ -2.11
SIN3YOL004W RPS25BP0C0T4 108 aaKnown RBP1.87□□□□□ -2.11
SIN3YOL004W YEL067CP39978 195 aa1.87□□□□□ -2.11
SIN3YOL004W ERV14P53173 138 aa1.87□□□□□ -2.11
SIN3YOL004W PAU12P53343 120 aa1.87□□□□□ -2.11
SIN3YOL004W RPS25AQ3E792 108 aaPredicted RBP1.87□□□□□ -2.11
SIN3YOL004W SUS1Q6WNK7 96 aa1.87□□□□□ -2.11
SIN3YOL004W YHR007C-AQ07074 71 aa1.87□□□□□ -2.11
SIN3YOL004W SWM2P40342 146 aa1.86□□□□□ -2.11
SIN3YOL004W MID2P36027 376 aa1.86□□□□□ -2.11
SIN3YOL004W YHL005CP38752 130 aa1.86□□□□□ -2.11
SIN3YOL004W TDA2P40045 126 aa1.86□□□□□ -2.11
SIN3YOL004W YGL010WP25338 174 aa1.86□□□□□ -2.11
SIN3YOL004W YJL027CP47063 138 aaPredicted RBP1.86□□□□□ -2.11
SIN3YOL004W DAD3P69850 94 aa1.86□□□□□ -2.11
SIN3YOL004W YGL258W-AQ3E740 77 aa1.86□□□□□ -2.11
SIN3YOL004W YHR130CP38834 111 aa1.85□□□□□ -2.11
SIN3YOL004W HSP10P38910 106 aa1.85□□□□□ -2.11
SIN3YOL004W SNU13P39990 126 aaKnown RBP1.85□□□□□ -2.11
SIN3YOL004W LST8P41318 303 aa1.85□□□□□ -2.11
SIN3YOL004W YOR381W-AQ3E804 55 aa1.85□□□□□ -2.11
SIN3YOL004W INO4P13902 151 aa1.85□□□□□ -2.11
SIN3YOL004W PAU2P32612 120 aa1.85□□□□□ -2.11
SIN3YOL004W YOR385WQ08909 290 aa1.85□□□□□ -2.11
SIN3YOL004W SOD1P00445 154 aaKnown RBP1.84□□□□□ -2.11
SIN3YOL004W YHR213WP0CI67 198 aa1.84□□□□□ -2.11
SIN3YOL004W YMR252CQ04814 134 aa1.84□□□□□ -2.11
SIN3YOL004W PAU21P0CE86 164 aa1.84□□□□□ -2.11
SIN3YOL004W PAU22P0CE87 164 aa1.84□□□□□ -2.11
SIN3YOL004W FYV5P25585 152 aa1.84□□□□□ -2.11
SIN3YOL004W MPC3P53311 146 aa1.84□□□□□ -2.11
SIN3YOL004W YIL014C-AQ02598 104 aa1.84□□□□□ -2.11
SIN3YOL004W YLR365WQ7LIF2 110 aa1.84□□□□□ -2.11
SIN3YOL004W CWP2P43497 92 aa1.84□□□□□ -2.12
SIN3YOL004W YAL064WP39711 94 aa1.84□□□□□ -2.12
SIN3YOL004W FPR2P32472 135 aa1.83□□□□□ -2.12
SIN3YOL004W KRE9P39005 276 aa1.83□□□□□ -2.12
SIN3YOL004W PFY1P07274 126 aa1.83□□□□□ -2.12
SIN3YOL004W DAD1Q12248 94 aa1.83□□□□□ -2.12
SIN3YOL004W HPA3P39979 161 aa1.83□□□□□ -2.12
SIN3YOL004W YMR175W-AQ3E766 64 aa1.83□□□□□ -2.12
SIN3YOL004W YER187WP40102 141 aa1.82□□□□□ -2.12
SIN3YOL004W YOL085CQ99345 113 aa1.82□□□□□ -2.12
SIN3YOL004W SEC11P15367 167 aa1.82□□□□□ -2.12
SIN3YOL004W SRB6P32570 121 aa1.82□□□□□ -2.12
SIN3YOL004W PAU24P38155 120 aa1.82□□□□□ -2.12
SIN3YOL004W BRP1P53194 125 aa1.82□□□□□ -2.12
SIN3YOL004W VMA9Q3E7B6 73 aa1.82□□□□□ -2.12
SIN3YOL004W RPL33AP05744 107 aaKnown RBP1.82□□□□□ -2.12
SIN3YOL004W OST5Q92316 86 aa1.82□□□□□ -2.12
SIN3YOL004W HMRA2P0CY13 119 aa1.82□□□□□ -2.12
SIN3YOL004W YHL042WP38729 150 aa1.82□□□□□ -2.12
SIN3YOL004W YNR077CP53758 84 aa1.82□□□□□ -2.12
SIN3YOL004W POP3P53833 195 aaPredicted RBP1.82□□□□□ -2.12
SIN3YOL004W YKL044WP36092 106 aa1.81□□□□□ -2.12
SIN3YOL004W COX8P04039 78 aa1.81□□□□□ -2.12
SIN3YOL004W MRP17P28778 131 aa1.81□□□□□ -2.12
SIN3YOL004W YMR122W-AQ3E842 84 aa1.81□□□□□ -2.12
SIN3YOL004W YLR157W-DP0CE99 70 aa1.81□□□□□ -2.12
SIN3YOL004W RPL36BO14455 100 aaKnown RBP1.81□□□□□ -2.12
SIN3YOL004W RPL36AP05745 100 aaPredicted RBP1.81□□□□□ -2.12
SIN3YOL004W YJL144WP47009 104 aa1.81□□□□□ -2.12
SIN3YOL004W YCL001W-AP87012 153 aa1.81□□□□□ -2.12
SIN3YOL004W YMR230W-AQ3E7B5 62 aa1.8□□□□□ -2.12
SIN3YOL004W GCV3P39726 170 aaPredicted RBP1.8□□□□□ -2.12
SIN3YOL004W CYT2Q00873 224 aa1.8□□□□□ -2.12
SIN3YOL004W RPA12P32529 125 aaKnown RBP1.8□□□□□ -2.12
SIN3YOL004W YPL261CQ08976 102 aa1.8□□□□□ -2.12
SIN3YOL004W YEL014CP39999 101 aa1.79□□□□□ -2.12
SIN3YOL004W MSL1P40567 111 aaPredicted RBP1.79□□□□□ -2.12
SIN3YOL004W PAU15P40585 124 aa1.79□□□□□ -2.12
SIN3YOL004W YGL194C-AQ2V2P6 80 aa1.79□□□□□ -2.12
SIN3YOL004W DCV1P43595 202 aa1.79□□□□□ -2.12
SIN3YOL004W COX19Q3E731 98 aa1.79□□□□□ -2.12
SIN3YOL004W CCW12Q12127 133 aa1.79□□□□□ -2.12
SIN3YOL004W DAD4P69851 72 aa1.79□□□□□ -2.12
SIN3YOL004W EMC6Q12431 108 aa1.79□□□□□ -2.12
SIN3YOL004W KRE1P17260 313 aa1.78□□□□□ -2.12
SIN3YOL004W FUN14P18411 198 aa1.78□□□□□ -2.12
SIN3YOL004W YNL122CP53921 115 aaPredicted RBP1.78□□□□□ -2.12
SIN3YOL004W MIC10Q96VH5 97 aa1.78□□□□□ -2.12
SIN3YOL004W YKR045CP36138 183 aa1.78□□□□□ -2.13
SIN3YOL004W SMD3P43321 101 aaKnown RBP1.78□□□□□ -2.13
SIN3YOL004W DYN1P36022 4092 aa1.77□□□□□ -2.13
SIN3YOL004W SNN1P48232 102 aa1.77□□□□□ -2.13
SIN3YOL004W DAN1P47178 298 aa1.77□□□□□ -2.13
SIN3YOL004W SCP1Q08873 200 aa1.77□□□□□ -2.13
SIN3YOL004W YLR363W-AQ3E747 85 aa1.77□□□□□ -2.13
SIN3YOL004W DSE2P38844 325 aa1.77□□□□□ -2.13
SIN3YOL004W YJR146WP47174 117 aa1.77□□□□□ -2.13
SIN3YOL004W YLR296WQ05898 108 aa1.77□□□□□ -2.13
SIN3YOL004W ATG8P38182 117 aaRIP-Chip data1.76□□□□□ -2.13not detected
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms