RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W RPS11BP0CX48 156 aaKnown RBP1.34□□□□□ -2.2
RTP1YMR185W HOT13P36078 116 aa1.34□□□□□ -2.2
RTP1YMR185W YSY6P38374 65 aa1.34□□□□□ -2.2
RTP1YMR185W MIG3P39943 394 aa1.34□□□□□ -2.2
RTP1YMR185W VHS2P40463 436 aa1.34□□□□□ -2.2
RTP1YMR185W PMP3P87284 55 aa1.34□□□□□ -2.2
RTP1YMR185W COF1Q03048 143 aaKnown RBP1.34□□□□□ -2.2
RTP1YMR185W SPG4Q04438 115 aa1.34□□□□□ -2.2
RTP1YMR185W EMC6Q12431 108 aa1.34□□□□□ -2.2
RTP1YMR185W YGR039WP53225 103 aa1.33□□□□□ -2.2
RTP1YMR185W VPS13Q07878 3144 aa1.33□□□□□ -2.2
RTP1YMR185W YBR126W-AQ8TGU7 68 aa1.33□□□□□ -2.2
RTP1YMR185W TOS8P53147 276 aa1.33□□□□□ -2.2
RTP1YMR185W YMR295CQ03559 197 aa1.33□□□□□ -2.2
RTP1YMR185W ICY1Q04329 127 aa1.33□□□□□ -2.2
RTP1YMR185W PBA1Q05778 276 aa1.33□□□□□ -2.2
RTP1YMR185W RDS3Q06835 107 aaPredicted RBP1.33□□□□□ -2.2
RTP1YMR185W YOR011W-AQ3E807 68 aa1.33□□□□□ -2.2
RTP1YMR185W RPL2AP0CX45 254 aaKnown RBP1.33□□□□□ -2.2
RTP1YMR185W RPL2BP0CX46 254 aaKnown RBP1.33□□□□□ -2.2
RTP1YMR185W RSM19P53733 91 aaPredicted RBP1.33□□□□□ -2.2
RTP1YMR185W ERI1P62651 68 aaKnown RBP1.33□□□□□ -2.2
RTP1YMR185W IRC21Q04772 201 aa1.33□□□□□ -2.2
RTP1YMR185W YGR240C-AQ3E786 66 aa1.33□□□□□ -2.2
RTP1YMR185W YER145C-AA0A023PYF4 145 aa1.32□□□□□ -2.2
RTP1YMR185W RPL15AP05748 204 aaKnown RBP1.32□□□□□ -2.2
RTP1YMR185W KRE9P39005 276 aa1.32□□□□□ -2.2
RTP1YMR185W ERG28P40030 148 aa1.32□□□□□ -2.2
RTP1YMR185W YIL059CP40520 121 aa1.32□□□□□ -2.2
RTP1YMR185W KNH1P50112 268 aa1.32□□□□□ -2.2
RTP1YMR185W VAM10Q08474 114 aa1.32□□□□□ -2.2
RTP1YMR185W YLL006W-AQ3E814 58 aa1.32□□□□□ -2.2
RTP1YMR185W YMR122W-AQ3E842 84 aa1.32□□□□□ -2.2
RTP1YMR185W YAL065CO13511 128 aa1.32□□□□□ -2.2
RTP1YMR185W RPS28BP0C0X0 67 aaKnown RBP1.32□□□□□ -2.2
RTP1YMR185W YER039C-AP0CD97 72 aa1.32□□□□□ -2.2
RTP1YMR185W YJR107C-AP0CT86 78 aa1.32□□□□□ -2.2
RTP1YMR185W YGR164WP53291 111 aa1.32□□□□□ -2.2
RTP1YMR185W ATP18P81450 59 aa1.32□□□□□ -2.2
RTP1YMR185W YDR246W-AQ3E763 66 aa1.32□□□□□ -2.2
RTP1YMR185W YMR175W-AQ3E766 64 aa1.32□□□□□ -2.2
RTP1YMR185W RPS28AQ3E7X9 67 aaPredicted RBP1.32□□□□□ -2.2
RTP1YMR185W KTI11Q3E840 82 aa1.32□□□□□ -2.2
RTP1YMR185W SPS100P13130 326 aa1.31□□□□□ -2.2
RTP1YMR185W YBR219CP38317 127 aa1.31□□□□□ -2.2
RTP1YMR185W YHL018WP38744 120 aaPredicted RBP1.31□□□□□ -2.2
RTP1YMR185W YFR035CP43608 114 aa1.31□□□□□ -2.2
RTP1YMR185W SBH1P52870 82 aa1.31□□□□□ -2.2
RTP1YMR185W ALG13P53178 202 aa1.31□□□□□ -2.2
RTP1YMR185W YDR029WQ12111 104 aa1.31□□□□□ -2.2
RTP1YMR185W YLR412C-AQ3E742 68 aa1.31□□□□□ -2.2
RTP1YMR185W YBL112CQ3E7Y4 105 aa1.31□□□□□ -2.2
RTP1YMR185W HFA1P32874 2273 aa1.31□□□□□ -2.2
RTP1YMR185W CSF1Q12150 2958 aa1.31□□□□□ -2.2
RTP1YMR185W YBR209WP38311 105 aa1.31□□□□□ -2.2
RTP1YMR185W SFT1P43682 97 aa1.31□□□□□ -2.2
RTP1YMR185W YGL260WP53056 76 aa1.31□□□□□ -2.2
RTP1YMR185W YPS5P53057 165 aa1.31□□□□□ -2.2
RTP1YMR185W SRL1Q08673 210 aa1.31□□□□□ -2.2
RTP1YMR185W YDR182W-AQ3E796 67 aa1.31□□□□□ -2.2
RTP1YMR185W YPR010C-AA5Z2X5 72 aa1.3□□□□□ -2.2
RTP1YMR185W YBR121C-AP0C5L4 52 aa1.3□□□□□ -2.2
RTP1YMR185W YER187WP40102 141 aa1.3□□□□□ -2.2
RTP1YMR185W RPC10P40422 70 aa1.3□□□□□ -2.2
RTP1YMR185W YKL183C-AQ3E765 70 aa1.3□□□□□ -2.2
RTP1YMR185W TAR1Q8TGM6 124 aa1.3□□□□□ -2.2
RTP1YMR185W YCR050CP25630 102 aa1.3□□□□□ -2.2
RTP1YMR185W YRA2P36036 203 aaKnown RBP RIP-Chip data1.3□□□□□ -2.2not detected
RTP1YMR185W TMC1Q08422 150 aaPredicted RBP1.3□□□□□ -2.2
RTP1YMR185W Q0297Q9ZZV8 51 aa1.3□□□□□ -2.2
RTP1YMR185W UBC4P15731 148 aa1.29□□□□□ -2.2
RTP1YMR185W YGL088WP53151 121 aa1.29□□□□□ -2.2
RTP1YMR185W HAL1Q01766 294 aa1.29□□□□□ -2.2
RTP1YMR185W YFR009W-AP0C5M9 85 aa1.29□□□□□ -2.2
RTP1YMR185W YLR156WP0CE96 114 aa1.29□□□□□ -2.2
RTP1YMR185W YLR159WP0CE97 114 aa1.29□□□□□ -2.2
RTP1YMR185W YLR161WP0CE98 114 aa1.29□□□□□ -2.2
RTP1YMR185W MPC3P53311 146 aa1.29□□□□□ -2.2
RTP1YMR185W ATP20Q12233 115 aa1.29□□□□□ -2.2
RTP1YMR185W YLR285C-AQ3E771 56 aa1.29□□□□□ -2.2
RTP1YMR185W TSC3Q3E790 80 aa1.29□□□□□ -2.2
RTP1YMR185W RPL26AP05743 127 aaKnown RBP1.29□□□□□ -2.2
RTP1YMR185W AIM4P38305 123 aaPredicted RBP1.29□□□□□ -2.2
RTP1YMR185W YFL019CP43576 117 aa1.29□□□□□ -2.2
RTP1YMR185W RPL26BP53221 127 aaKnown RBP1.29□□□□□ -2.2
RTP1YMR185W TIM10P87108 93 aa1.29□□□□□ -2.2
RTP1YMR185W YMR320WQ04897 101 aa1.29□□□□□ -2.2
RTP1YMR185W CRC1Q12289 327 aa1.29□□□□□ -2.2
RTP1YMR185W YOR034C-AQ3E735 80 aa1.29□□□□□ -2.2
RTP1YMR185W RPL33AP05744 107 aaKnown RBP1.28□□□□□ -2.2
RTP1YMR185W YBL039W-BP0C268 59 aa1.28□□□□□ -2.2
RTP1YMR185W COX23P38824 151 aa1.28□□□□□ -2.2
RTP1YMR185W RPL33BP41056 107 aaKnown RBP1.28□□□□□ -2.2
RTP1YMR185W MVB12P42939 101 aa1.28□□□□□ -2.2
RTP1YMR185W YOR314WQ12506 109 aa1.28□□□□□ -2.2
RTP1YMR185W YLR307C-AQ3E825 87 aa1.28□□□□□ -2.2
RTP1YMR185W TAO3P40468 2376 aa1.28□□□□□ -2.2
RTP1YMR185W RPL36BO14455 100 aaKnown RBP1.28□□□□□ -2.2
RTP1YMR185W RPL36AP05745 100 aaPredicted RBP1.28□□□□□ -2.2
RTP1YMR185W YBR144CP34215 104 aa1.28□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms