RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C KEG1P43614 200 aa1.8□□□□□ -2.12
CSF1YLR087C YGL149WP53116 101 aa1.8□□□□□ -2.12
CSF1YLR087C SWT21P53873 357 aaPredicted RBP1.8□□□□□ -2.12
CSF1YLR087C RPB9P27999 122 aa1.8□□□□□ -2.12
CSF1YLR087C YGR045CP53229 120 aa1.8□□□□□ -2.12
CSF1YLR087C YPR108W-AQ3E7B3 70 aa1.8□□□□□ -2.12
CSF1YLR087C MLF3P32047 452 aa1.8□□□□□ -2.12
CSF1YLR087C MIG3P39943 394 aa1.8□□□□□ -2.12
CSF1YLR087C YOR072WQ08486 104 aa1.8□□□□□ -2.12
CSF1YLR087C KSH1Q8TGJ3 72 aa1.8□□□□□ -2.12
CSF1YLR087C RPL43AP0CX25 92 aaKnown RBP1.8□□□□□ -2.12
CSF1YLR087C RPL43BP0CX26 92 aa1.8□□□□□ -2.12
CSF1YLR087C YPI1P43587 155 aa1.8□□□□□ -2.12
CSF1YLR087C TAD3Q9URQ3 322 aa1.79□□□□□ -2.12
CSF1YLR087C YBL059WP34224 193 aa1.79□□□□□ -2.12
CSF1YLR087C REE1P40893 198 aa1.79□□□□□ -2.12
CSF1YLR087C YDL242WQ07746 117 aa1.79□□□□□ -2.12
CSF1YLR087C AIM26P32858 118 aa1.79□□□□□ -2.12
CSF1YLR087C MRPL31P14063 131 aaPredicted RBP1.79□□□□□ -2.12
CSF1YLR087C IRC23Q08416 157 aa1.79□□□□□ -2.12
CSF1YLR087C YGL041C-BQ3E750 60 aa1.79□□□□□ -2.12
CSF1YLR087C MOH1P38191 138 aa1.79□□□□□ -2.12
CSF1YLR087C YOL159CQ08300 171 aa1.79□□□□□ -2.12
CSF1YLR087C MPC2P38857 129 aa1.78□□□□□ -2.12
CSF1YLR087C RPL26AP05743 127 aaKnown RBP1.78□□□□□ -2.12
CSF1YLR087C RPL26BP53221 127 aaKnown RBP1.78□□□□□ -2.12
CSF1YLR087C YLR162WQ06235 118 aa1.78□□□□□ -2.12
CSF1YLR087C YCL021W-AQ96VH3 125 aa1.78□□□□□ -2.12
CSF1YLR087C MDN1Q12019 4910 aaKnown RBP1.78□□□□□ -2.12
CSF1YLR087C FYV12Q08559 129 aa1.78□□□□□ -2.12
CSF1YLR087C IMP2P46972 177 aa1.78□□□□□ -2.12
CSF1YLR087C RGM1Q00453 211 aa1.78□□□□□ -2.12
CSF1YLR087C YGR269WP40326 108 aa1.78□□□□□ -2.12
CSF1YLR087C NCA3P46955 337 aa1.78□□□□□ -2.12
CSF1YLR087C YGR025WP53216 100 aa1.78□□□□□ -2.12
CSF1YLR087C YLR111WQ12528 110 aa1.78□□□□□ -2.12
CSF1YLR087C YER121WP40076 114 aa1.78□□□□□ -2.13
CSF1YLR087C YER187WP40102 141 aa1.78□□□□□ -2.13
CSF1YLR087C YGR219WP53307 113 aa1.78□□□□□ -2.13
CSF1YLR087C YNL184CP53876 108 aa1.78□□□□□ -2.13
CSF1YLR087C OST5Q92316 86 aa1.77□□□□□ -2.13
CSF1YLR087C YPR013CQ12145 317 aa1.77□□□□□ -2.13
CSF1YLR087C YOR008C-AQ3E7B9 74 aa1.77□□□□□ -2.13
CSF1YLR087C YBR298C-AQ8TGK4 73 aa1.77□□□□□ -2.13
CSF1YLR087C EDC2P40023 145 aaPredicted RBP1.77□□□□□ -2.13
CSF1YLR087C YIL060WP40519 144 aa1.77□□□□□ -2.13
CSF1YLR087C RPR2P40571 144 aa1.77□□□□□ -2.13
CSF1YLR087C DAD3P69850 94 aa1.77□□□□□ -2.13
CSF1YLR087C RPL23AP0CX41 137 aaKnown RBP1.76□□□□□ -2.13
CSF1YLR087C RPL23BP0CX42 137 aaKnown RBP1.76□□□□□ -2.13
CSF1YLR087C YNL198CP40166 100 aa1.76□□□□□ -2.13
CSF1YLR087C POR2P40478 281 aa1.76□□□□□ -2.13
CSF1YLR087C MZM1Q03429 123 aaPredicted RBP1.76□□□□□ -2.13
CSF1YLR087C API2Q04413 109 aa1.76□□□□□ -2.13
CSF1YLR087C YPL261CQ08976 102 aa1.76□□□□□ -2.13
CSF1YLR087C DDR48P18899 430 aaKnown RBP1.76□□□□□ -2.13
CSF1YLR087C ATP17Q06405 101 aa1.76□□□□□ -2.13
CSF1YLR087C VPS55P47111 140 aa1.76□□□□□ -2.13
CSF1YLR087C VPS68Q12016 184 aa1.76□□□□□ -2.13
CSF1YLR087C HSP150P32478 413 aa1.76□□□□□ -2.13
CSF1YLR087C MRX7P53869 86 aa1.75□□□□□ -2.13
CSF1YLR087C YPR153WQ06537 140 aa1.75□□□□□ -2.13
CSF1YLR087C RDS3Q06835 107 aaPredicted RBP1.75□□□□□ -2.13
CSF1YLR087C TDA8Q6B2U8 126 aa1.75□□□□□ -2.13
CSF1YLR087C COX23P38824 151 aa1.75□□□□□ -2.13
CSF1YLR087C YHR007C-AQ07074 71 aa1.75□□□□□ -2.13
CSF1YLR087C SUN4P53616 420 aa1.75□□□□□ -2.13
CSF1YLR087C YJL028WP47062 111 aa1.75□□□□□ -2.13
CSF1YLR087C YMR244WQ04018 355 aa1.75□□□□□ -2.13
CSF1YLR087C YHR139C-AO13536 103 aa1.74□□□□□ -2.13
CSF1YLR087C YFL019CP43576 117 aa1.74□□□□□ -2.13
CSF1YLR087C YFR035CP43608 114 aa1.74□□□□□ -2.13
CSF1YLR087C YKL018C-AQ3E7A7 99 aa1.74□□□□□ -2.13
CSF1YLR087C LCL1Q02786 101 aa1.74□□□□□ -2.13
CSF1YLR087C ICY1Q04329 127 aa1.74□□□□□ -2.13
CSF1YLR087C RRT1P38192 103 aa1.73□□□□□ -2.13
CSF1YLR087C SMD1Q02260 146 aaPredicted RBP1.73□□□□□ -2.13
CSF1YLR087C YDR115WQ04598 105 aa1.73□□□□□ -2.13
CSF1YLR087C SRL1Q08673 210 aa1.73□□□□□ -2.13
CSF1YLR087C YLR112WQ12130 139 aa1.73□□□□□ -2.13
CSF1YLR087C YOR011W-AQ3E807 68 aa1.73□□□□□ -2.13
CSF1YLR087C YNR014WP53719 212 aa1.73□□□□□ -2.13
CSF1YLR087C DSE2P38844 325 aa1.72□□□□□ -2.13
CSF1YLR087C YFL051CP43552 160 aa1.72□□□□□ -2.13
CSF1YLR087C YER188C-AP0C0V2 99 aa1.72□□□□□ -2.13
CSF1YLR087C STP3Q05937 343 aa1.72□□□□□ -2.13
CSF1YLR087C YOL160WQ08321 113 aa1.72□□□□□ -2.13
CSF1YLR087C COX7P10174 60 aa1.72□□□□□ -2.13
CSF1YLR087C YGL015CP33199 130 aa1.72□□□□□ -2.13
CSF1YLR087C DDR2P89113 61 aa1.72□□□□□ -2.13
CSF1YLR087C YDR524C-BQ3E6R4 66 aa1.72□□□□□ -2.13
CSF1YLR087C EAF6P47128 113 aa1.72□□□□□ -2.13
CSF1YLR087C YEL067CP39978 195 aa1.72□□□□□ -2.13
CSF1YLR087C YBL112CQ3E7Y4 105 aa1.72□□□□□ -2.13
CSF1YLR087C AIM4P38305 123 aaPredicted RBP1.72□□□□□ -2.13
CSF1YLR087C YNR077CP53758 84 aa1.72□□□□□ -2.13
CSF1YLR087C YBL071CP38185 102 aa1.71□□□□□ -2.14
CSF1YLR087C OLI1P61829 76 aa1.71□□□□□ -2.14
CSF1YLR087C AQY2P0CD90 149 aa1.71□□□□□ -2.14
CSF1YLR087C YAL064WP39711 94 aa1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms