RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C YHR214C-DP0CX93 97 aa1.65□□□□□ -2.15
YIR043CYIR043C YBR292CP38357 123 aa1.65□□□□□ -2.15
YIR043CYIR043C YPL038W-AQ3E7B4 63 aa1.65□□□□□ -2.15
YIR043CYIR043C PAU8P0CE92 120 aa1.64□□□□□ -2.15
YIR043CYIR043C PAU11P0CE93 120 aa1.64□□□□□ -2.15
YIR043CYIR043C SSS1P35179 80 aa1.64□□□□□ -2.15
YIR043CYIR043C PDX3P38075 228 aaKnown RBP1.64□□□□□ -2.15
YIR043CYIR043C PAU13P38725 120 aa1.64□□□□□ -2.15
YIR043CYIR043C SWM2P40342 146 aa1.64□□□□□ -2.15
YIR043CYIR043C PAU4P53427 120 aa1.64□□□□□ -2.15
YIR043CYIR043C MRX7P53869 86 aa1.64□□□□□ -2.15
YIR043CYIR043C PAU10Q03050 120 aa1.64□□□□□ -2.15
YIR043CYIR043C YOL131WQ08270 108 aa1.64□□□□□ -2.15
YIR043CYIR043C PAU9Q3E770 120 aa1.64□□□□□ -2.15
YIR043CYIR043C YNR034W-AQ3E841 98 aa1.64□□□□□ -2.15
YIR043CYIR043C TCB3Q03640 1545 aaKnown RBP1.64□□□□□ -2.15
YIR043CYIR043C TY1B-DR5P0C2I2 1755 aa1.64□□□□□ -2.15
YIR043CYIR043C TY1B-DR6P0C2I3 1755 aa1.64□□□□□ -2.15
YIR043CYIR043C TY1B-LR2P0C2I5 1755 aa1.64□□□□□ -2.15
YIR043CYIR043C TY1B-LR3P0C2I6 1755 aaKnown RBP1.64□□□□□ -2.15
YIR043CYIR043C TY1B-PR1P0C2I9 1755 aaKnown RBP1.64□□□□□ -2.15
YIR043CYIR043C TY1B-PR3P0C2J1 1755 aaKnown RBP1.64□□□□□ -2.15
YIR043CYIR043C TY1B-JR1P47098 1755 aa1.64□□□□□ -2.15
YIR043CYIR043C TY1B-ML2Q03434 1755 aaKnown RBP1.64□□□□□ -2.15
YIR043CYIR043C TY1B-ER1Q03612 1755 aa1.64□□□□□ -2.15
YIR043CYIR043C TY1B-ML1Q04711 1755 aaKnown RBP1.64□□□□□ -2.15
YIR043CYIR043C TY1B-GR2Q12269 1755 aa1.64□□□□□ -2.15
YIR043CYIR043C TY1B-OLQ12273 1755 aa1.64□□□□□ -2.15
YIR043CYIR043C TY1B-PLQ12414 1755 aaKnown RBP1.64□□□□□ -2.15
YIR043CYIR043C SCC2Q04002 1493 aa1.63□□□□□ -2.15
YIR043CYIR043C ECM29P38737 1868 aa1.63□□□□□ -2.15
YIR043CYIR043C YLR255CO13574 117 aa1.63□□□□□ -2.15
YIR043CYIR043C PAU23Q07987 124 aa1.63□□□□□ -2.15
YIR043CYIR043C PAU17Q12370 124 aa1.63□□□□□ -2.15
YIR043CYIR043C SRB8P25648 1427 aa1.63□□□□□ -2.15
YIR043CYIR043C TIM12P32830 109 aa1.62□□□□□ -2.15
YIR043CYIR043C MPC2P38857 129 aa1.62□□□□□ -2.15
YIR043CYIR043C YOR314WQ12506 109 aa1.62□□□□□ -2.15
YIR043CYIR043C MMS22Q06164 1454 aa1.62□□□□□ -2.15
YIR043CYIR043C DOP1Q03921 1698 aa1.61□□□□□ -2.15
YIR043CYIR043C PAU1P0CE88 120 aa1.61□□□□□ -2.15
YIR043CYIR043C PAU14P0CE89 120 aa1.61□□□□□ -2.15
YIR043CYIR043C RPS11AP0CX47 156 aaKnown RBP1.61□□□□□ -2.15
YIR043CYIR043C RPS11BP0CX48 156 aaKnown RBP1.61□□□□□ -2.15
YIR043CYIR043C COX12Q01519 83 aa1.61□□□□□ -2.15
YIR043CYIR043C YOR105WQ08504 108 aa1.61□□□□□ -2.15
YIR043CYIR043C YFL041W-AQ3E817 63 aa1.61□□□□□ -2.15
YIR043CYIR043C XRN1P22147 1528 aaKnown RBP1.61□□□□□ -2.15
YIR043CYIR043C STT4P37297 1900 aa1.6□□□□□ -2.15
YIR043CYIR043C BPH1P25356 2167 aa1.6□□□□□ -2.15
YIR043CYIR043C AIM19P40502 157 aa1.6□□□□□ -2.15
YIR043CYIR043C BSC4P53841 131 aa1.6□□□□□ -2.15
YIR043CYIR043C YDR010CQ12426 110 aa1.6□□□□□ -2.15
YIR043CYIR043C YRF1-1P0CX20 1796 aa1.59□□□□□ -2.15
YIR043CYIR043C YRF1-5P0CX21 1796 aa1.59□□□□□ -2.15
YIR043CYIR043C YRF1-8P0CX22 1796 aa1.59□□□□□ -2.15
YIR043CYIR043C UFD4P33202 1483 aa1.59□□□□□ -2.15
YIR043CYIR043C YAL065CO13511 128 aa1.59□□□□□ -2.15
YIR043CYIR043C YNL198CP40166 100 aa1.59□□□□□ -2.15
YIR043CYIR043C PAU20Q08322 120 aa1.59□□□□□ -2.15
YIR043CYIR043C YKL065W-AQ2V2P2 73 aa1.59□□□□□ -2.15
YIR043CYIR043C YIL156W-BQ2V2P4 73 aa1.59□□□□□ -2.15
YIR043CYIR043C AUA1P32450 94 aa1.58□□□□□ -2.16
YIR043CYIR043C YGR121W-AQ3E816 71 aa1.58□□□□□ -2.16
YIR043CYIR043C NOP10Q6Q547 58 aaPredicted RBP1.58□□□□□ -2.16
YIR043CYIR043C TY1B-DR4Q07793 1604 aa1.58□□□□□ -2.16
YIR043CYIR043C SMC4Q12267 1418 aa1.57□□□□□ -2.16
YIR043CYIR043C FPR2P32472 135 aa1.57□□□□□ -2.16
YIR043CYIR043C YHR173CP38864 112 aa1.57□□□□□ -2.16
YIR043CYIR043C QCR9P22289 66 aa1.56□□□□□ -2.16
YIR043CYIR043C COX19Q3E731 98 aa1.56□□□□□ -2.16
YIR043CYIR043C VMA9Q3E7B6 73 aa1.56□□□□□ -2.16
YIR043CYIR043C YIL134C-AQ45U18 67 aa1.56□□□□□ -2.16
YIR043CYIR043C TY1B-JR2P47100 1755 aaKnown RBP1.56□□□□□ -2.16
YIR043CYIR043C TY1B-ER2Q03619 1755 aa1.56□□□□□ -2.16
YIR043CYIR043C TY1B-MR1Q04214 1755 aa1.56□□□□□ -2.16
YIR043CYIR043C TY1B-MR2Q04670 1755 aaKnown RBP1.56□□□□□ -2.16
YIR043CYIR043C TY1B-LR1Q12088 1755 aaKnown RBP1.56□□□□□ -2.16
YIR043CYIR043C TY1B-NL1Q12112 1755 aa1.56□□□□□ -2.16
YIR043CYIR043C TY1B-GR1Q12141 1755 aa1.56□□□□□ -2.16
YIR043CYIR043C TY1B-BLQ12490 1755 aa1.56□□□□□ -2.16
YIR043CYIR043C YGR035W-AQ45U48 73 aa1.55□□□□□ -2.16
YIR043CYIR043C NTE1Q04958 1679 aa1.55□□□□□ -2.16
YIR043CYIR043C TY4B-HP0C2J7 1802 aa1.54□□□□□ -2.16
YIR043CYIR043C DNF1P32660 1571 aa1.54□□□□□ -2.16
YIR043CYIR043C MOT1P32333 1867 aa1.54□□□□□ -2.16
YIR043CYIR043C YIL086CP40503 102 aa1.53□□□□□ -2.16
YIR043CYIR043C POL2P21951 2222 aaKnown RBP1.52□□□□□ -2.17
YIR043CYIR043C PMD1P32634 1753 aa1.52□□□□□ -2.17
YIR043CYIR043C UTP10P42945 1769 aaKnown RBP1.52□□□□□ -2.17
YIR043CYIR043C RRP5Q05022 1729 aaKnown RBP1.52□□□□□ -2.17
YIR043CYIR043C VPS15P22219 1454 aa1.52□□□□□ -2.17
YIR043CYIR043C IQG1Q12280 1495 aa1.52□□□□□ -2.17
YIR043CYIR043C YDL022C-AP0C5L6 82 aa1.52□□□□□ -2.17
YIR043CYIR043C SHU1P38751 150 aa1.52□□□□□ -2.17
YIR043CYIR043C ERI1P62651 68 aaKnown RBP1.52□□□□□ -2.17
YIR043CYIR043C MYO4P32492 1471 aa1.51□□□□□ -2.17
YIR043CYIR043C YIL102C-AQ2V2P5 75 aa1.51□□□□□ -2.17
YIR043CYIR043C YMR122W-AQ3E842 84 aa1.51□□□□□ -2.17
YIR043CYIR043C BLM10P43583 2143 aa1.51□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 93 ms