RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W CWP2P43497 92 aa8.03□□□□□ -1.12
SIM1YIL123W NHP2P32495 156 aaPredicted RBP8.02□□□□□ -1.13
SIM1YIL123W YMR320WQ04897 101 aa8.02□□□□□ -1.13
SIM1YIL123W YMR175W-AQ3E766 64 aa8.02□□□□□ -1.13
SIM1YIL123W RPR2P40571 144 aa8.01□□□□□ -1.13
SIM1YIL123W YAL065CO13511 128 aa8□□□□□ -1.13
SIM1YIL123W CPR1P14832 162 aaKnown RBP8□□□□□ -1.13
SIM1YIL123W RPC10P40422 70 aa8□□□□□ -1.13
SIM1YIL123W CDC43P18898 376 aa7.99□□□□□ -1.13
SIM1YIL123W YGL015CP33199 130 aa7.99□□□□□ -1.13
SIM1YIL123W YHR130CP38834 111 aa7.98□□□□□ -1.13
SIM1YIL123W UBC11P52492 156 aa7.98□□□□□ -1.13
SIM1YIL123W YDL241WQ07738 123 aa7.98□□□□□ -1.13
SIM1YIL123W YLL066W-BQ8TGJ7 56 aa7.98□□□□□ -1.13
SIM1YIL123W MET32Q12041 191 aa7.97□□□□□ -1.13
SIM1YIL123W YRA2P36036 203 aaKnown RBP RIP-Chip data7.96□□□□□ -1.13not detected
SIM1YIL123W YIA6P40556 373 aa7.96□□□□□ -1.13
SIM1YIL123W YDR115WQ04598 105 aa7.96□□□□□ -1.13
SIM1YIL123W RGM1Q00453 211 aa7.95□□□□□ -1.14
SIM1YIL123W EOS1P53938 366 aa7.95□□□□□ -1.14
SIM1YIL123W YLL006W-AQ3E814 58 aa7.95□□□□□ -1.14
SIM1YIL123W YOR020W-AQ3E824 90 aa7.95□□□□□ -1.14
SIM1YIL123W DIF1O13577 133 aa7.94□□□□□ -1.14
SIM1YIL123W RTC6O14464 93 aa7.94□□□□□ -1.14
SIM1YIL123W PBA1Q05778 276 aa7.94□□□□□ -1.14
SIM1YIL123W DUT1P33317 147 aa7.92□□□□□ -1.14
SIM1YIL123W YBL081WP38180 368 aaKnown RBP7.92□□□□□ -1.14
SIM1YIL123W YAL064WP39711 94 aa7.91□□□□□ -1.14
SIM1YIL123W SVP26P38869 228 aa7.9□□□□□ -1.14
SIM1YIL123W HPA2Q06592 156 aa7.9□□□□□ -1.14
SIM1YIL123W ARO2P28777 376 aaKnown RBP7.89□□□□□ -1.15
SIM1YIL123W COX10P21592 462 aa7.88□□□□□ -1.15
SIM1YIL123W RPL29P05747 59 aaPredicted RBP7.86□□□□□ -1.15
SIM1YIL123W ABF2Q02486 183 aa7.86□□□□□ -1.15
SIM1YIL123W MRPL24P36525 258 aaPredicted RBP7.86□□□□□ -1.15
SIM1YIL123W MVB12P42939 101 aa7.86□□□□□ -1.15
SIM1YIL123W HUR1P45820 110 aa7.86□□□□□ -1.15
SIM1YIL123W RRT15Q3E811 62 aa7.86□□□□□ -1.15
SIM1YIL123W AQY2P0CD90 149 aa7.84□□□□□ -1.15
SIM1YIL123W SMD1Q02260 146 aaPredicted RBP7.84□□□□□ -1.15
SIM1YIL123W YPL229WQ99395 206 aa7.83□□□□□ -1.16
SIM1YIL123W KNH1P50112 268 aa7.82□□□□□ -1.16
SIM1YIL123W YFL019CP43576 117 aa7.81□□□□□ -1.16
SIM1YIL123W IRC21Q04772 201 aa7.81□□□□□ -1.16
SIM1YIL123W YBL039W-BP0C268 59 aa7.8□□□□□ -1.16
SIM1YIL123W YLR236CA0A023PZG4 107 aa7.79□□□□□ -1.16
SIM1YIL123W YAR023CD6VPM8 179 aa7.79□□□□□ -1.16
SIM1YIL123W ICY1Q04329 127 aa7.79□□□□□ -1.16
SIM1YIL123W VTS1Q08831 523 aaKnown RBP RIP-Chip data7.79□□□□□ -1.16not detected
SIM1YIL123W STF1P01098 86 aa7.78□□□□□ -1.16
SIM1YIL123W RPL11AP0C0W9 174 aaKnown RBP7.78□□□□□ -1.16
SIM1YIL123W DSE2P38844 325 aa7.78□□□□□ -1.16
SIM1YIL123W YOR034C-AQ3E735 80 aa7.78□□□□□ -1.16
SIM1YIL123W RPL11BQ3E757 174 aaPredicted RBP7.78□□□□□ -1.16
SIM1YIL123W RPA12P32529 125 aaKnown RBP7.78□□□□□ -1.16
SIM1YIL123W AIM19P40502 157 aa7.78□□□□□ -1.16
SIM1YIL123W OST2P46964 130 aa7.78□□□□□ -1.16
SIM1YIL123W YPL257WQ08974 193 aa7.76□□□□□ -1.17
SIM1YIL123W SLO1Q3E784 85 aa7.76□□□□□ -1.17
SIM1YIL123W ATX1P38636 73 aa7.75□□□□□ -1.17
SIM1YIL123W RUB1Q03919 77 aa7.75□□□□□ -1.17
SIM1YIL123W UBC4P15731 148 aa7.74□□□□□ -1.17
SIM1YIL123W YNL162W-AQ3E7A8 72 aa7.74□□□□□ -1.17
SIM1YIL123W MSA2P36157 363 aa7.73□□□□□ -1.17
SIM1YIL123W SNA2P56508 79 aa7.73□□□□□ -1.17
SIM1YIL123W IGD1P43598 195 aa7.72□□□□□ -1.17
SIM1YIL123W RPL26AP05743 127 aaKnown RBP7.69□□□□□ -1.18
SIM1YIL123W RPL26BP53221 127 aaKnown RBP7.69□□□□□ -1.18
SIM1YIL123W YCR085WP25650 117 aa7.69□□□□□ -1.18
SIM1YIL123W YDR029WQ12111 104 aa7.68□□□□□ -1.18
SIM1YIL123W YGL041C-BQ3E750 60 aa7.68□□□□□ -1.18
SIM1YIL123W SMP1P38128 452 aa7.67□□□□□ -1.18
SIM1YIL123W MPC3P53311 146 aa7.67□□□□□ -1.18
SIM1YIL123W YLR307C-AQ3E825 87 aa7.67□□□□□ -1.18
SIM1YIL123W Q0032Q9ZZX7 96 aa7.67□□□□□ -1.18
SIM1YIL123W YJR107C-AP0CT86 78 aa7.65□□□□□ -1.18
SIM1YIL123W INO4P13902 151 aa7.65□□□□□ -1.18
SIM1YIL123W YPR195CQ06594 109 aa7.65□□□□□ -1.18
SIM1YIL123W ECM12O13529 151 aa7.62□□□□□ -1.19
SIM1YIL123W MRP10O75012 95 aa7.62□□□□□ -1.19
SIM1YIL123W PBI2P0CT04 75 aaKnown RBP7.62□□□□□ -1.19
SIM1YIL123W FYV5P25585 152 aa7.62□□□□□ -1.19
SIM1YIL123W YDR381C-AQ3E6R5 114 aa7.62□□□□□ -1.19
SIM1YIL123W YBR230W-AQ3E762 66 aa7.62□□□□□ -1.19
SIM1YIL123W PEX22P39718 180 aa7.61□□□□□ -1.19
SIM1YIL123W YJL127C-BQ3E828 52 aa7.61□□□□□ -1.19
SIM1YIL123W SKI6P46948 246 aaPredicted RBP7.6□□□□□ -1.19
SIM1YIL123W YNL042W-BQ3E7Z2 85 aa7.6□□□□□ -1.19
SIM1YIL123W YDR034C-AP0C289 58 aa7.59□□□□□ -1.19
SIM1YIL123W SFT1P43682 97 aa7.57□□□□□ -1.2
SIM1YIL123W YAL063C-AQ3E791 96 aa7.57□□□□□ -1.2
SIM1YIL123W ISD11Q6Q560 94 aa7.57□□□□□ -1.2
SIM1YIL123W YGL193CP53097 103 aa7.56□□□□□ -1.2
SIM1YIL123W ATP18P81450 59 aa7.56□□□□□ -1.2
SIM1YIL123W GAT4P40569 121 aa7.54□□□□□ -1.2
SIM1YIL123W TSC3Q3E790 80 aa7.54□□□□□ -1.2
SIM1YIL123W YFL065CP43539 102 aa7.52□□□□□ -1.2
SIM1YIL123W YPR203WQ08994 102 aa7.52□□□□□ -1.2
SIM1YIL123W SPT4P32914 102 aaPredicted RBP7.52□□□□□ -1.21
SIM1YIL123W YFR009W-AP0C5M9 85 aa7.51□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms