RNA–Protein interactions for RNA: YIL038C

NOT3, Transcript of Subunit of CCR4-NOT global transcriptional regulator, yeastyeast

Gene NOT3, Length 2,511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NOT3YIL038C ENV10Q99382 181 aa3.74□□□□□ -1.81
NOT3YIL038C YPR170W-BP0C5R9 85 aa3.74□□□□□ -1.81
NOT3YIL038C HMRA2P0CY13 119 aa3.74□□□□□ -1.81
NOT3YIL038C ARC15P40518 154 aaRIP-Chip data3.74□□□□□ -1.81not detected
NOT3YIL038C YMR320WQ04897 101 aa3.74□□□□□ -1.81
NOT3YIL038C NAT5Q08689 176 aa3.74□□□□□ -1.81
NOT3YIL038C ADH1P00330 348 aaKnown RBP3.73□□□□□ -1.81
NOT3YIL038C SHU1P38751 150 aa3.73□□□□□ -1.81
NOT3YIL038C RPC10P40422 70 aa3.73□□□□□ -1.81
NOT3YIL038C YIL102C-AQ2V2P5 75 aa3.73□□□□□ -1.81
NOT3YIL038C IRA1P18963 3092 aa3.73□□□□□ -1.81
NOT3YIL038C RPL33AP05744 107 aaKnown RBP3.73□□□□□ -1.81
NOT3YIL038C RPL33BP41056 107 aaKnown RBP3.73□□□□□ -1.81
NOT3YIL038C YGR025WP53216 100 aa3.73□□□□□ -1.81
NOT3YIL038C YFR032C-BQ8TGU2 87 aa3.73□□□□□ -1.81
NOT3YIL038C RPL29P05747 59 aaPredicted RBP3.72□□□□□ -1.81
NOT3YIL038C AIM11P87275 137 aa3.72□□□□□ -1.81
NOT3YIL038C YPL261CQ08976 102 aa3.72□□□□□ -1.81
NOT3YIL038C BPH1P25356 2167 aa3.72□□□□□ -1.81
NOT3YIL038C MRPS12P53732 153 aa3.71□□□□□ -1.82
NOT3YIL038C YDR115WQ04598 105 aa3.71□□□□□ -1.82
NOT3YIL038C YPR014CQ6B0W2 109 aa3.71□□□□□ -1.82
NOT3YIL038C RPF1P38805 295 aaKnown RBP3.71□□□□□ -1.82
NOT3YIL038C YEL008WP40001 126 aa3.71□□□□□ -1.82
NOT3YIL038C YFL067WP43537 175 aa3.71□□□□□ -1.82
NOT3YIL038C YBL008W-AQ3E821 79 aa3.71□□□□□ -1.82
NOT3YIL038C YER181CP40097 107 aa3.7□□□□□ -1.82
NOT3YIL038C ABF2Q02486 183 aa3.7□□□□□ -1.82
NOT3YIL038C ELC1Q03071 99 aa3.7□□□□□ -1.82
NOT3YIL038C TOR1P35169 2470 aa3.7□□□□□ -1.82
NOT3YIL038C NRG2P38082 220 aa3.69□□□□□ -1.82
NOT3YIL038C ANB1P19211 157 aa3.68□□□□□ -1.82
NOT3YIL038C YNR077CP53758 84 aa3.68□□□□□ -1.82
NOT3YIL038C MEC1P38111 2368 aa3.68□□□□□ -1.82
NOT3YIL038C URA2P07259 2214 aaKnown RBP3.68□□□□□ -1.82
NOT3YIL038C PAI3P01094 68 aa3.68□□□□□ -1.82
NOT3YIL038C RTC6O14464 93 aa3.67□□□□□ -1.82
NOT3YIL038C UGX2P32772 223 aa3.67□□□□□ -1.82
NOT3YIL038C YHR130CP38834 111 aa3.67□□□□□ -1.82
NOT3YIL038C IGD1P43598 195 aa3.67□□□□□ -1.82
NOT3YIL038C LSM6Q06406 86 aaKnown RBP3.67□□□□□ -1.82
NOT3YIL038C YOR268CQ08734 132 aa3.67□□□□□ -1.82
NOT3YIL038C YAL065CO13511 128 aa3.66□□□□□ -1.82
NOT3YIL038C ATP15P21306 62 aa3.66□□□□□ -1.82
NOT3YIL038C AUA1P32450 94 aa3.66□□□□□ -1.82
NOT3YIL038C CWP2P43497 92 aa3.66□□□□□ -1.82
NOT3YIL038C SKI6P46948 246 aaPredicted RBP3.65□□□□□ -1.83
NOT3YIL038C HAL1Q01766 294 aa3.65□□□□□ -1.83
NOT3YIL038C PRP8P33334 2413 aaKnown RBP3.65□□□□□ -1.83
NOT3YIL038C ARO2P28777 376 aaKnown RBP3.65□□□□□ -1.83
NOT3YIL038C VTC1P40046 129 aaRIP-Chip data3.64□□□□□ -1.83not detected
NOT3YIL038C YNL190WP53872 204 aa3.64□□□□□ -1.83
NOT3YIL038C TDA8Q6B2U8 126 aa3.64□□□□□ -1.83
NOT3YIL038C SFT1P43682 97 aa3.64□□□□□ -1.83
NOT3YIL038C RGM1Q00453 211 aa3.64□□□□□ -1.83
NOT3YIL038C YLL066W-BQ8TGJ7 56 aa3.64□□□□□ -1.83
NOT3YIL038C NHP2P32495 156 aaPredicted RBP3.63□□□□□ -1.83
NOT3YIL038C SMD1Q02260 146 aaPredicted RBP3.63□□□□□ -1.83
NOT3YIL038C YMR295CQ03559 197 aa3.63□□□□□ -1.83
NOT3YIL038C TRA1P38811 3744 aa3.63□□□□□ -1.83
NOT3YIL038C YDL022C-AP0C5L6 82 aa3.62□□□□□ -1.83
NOT3YIL038C YEL067CP39978 195 aa3.62□□□□□ -1.83
NOT3YIL038C HYP2P23301 157 aaKnown RBP3.62□□□□□ -1.83
NOT3YIL038C YCR001WP25347 104 aa3.62□□□□□ -1.83
NOT3YIL038C SVP26P38869 228 aa3.62□□□□□ -1.83
NOT3YIL038C CIN5P40917 295 aa3.62□□□□□ -1.83
NOT3YIL038C ICY1Q04329 127 aa3.62□□□□□ -1.83
NOT3YIL038C YBL039W-BP0C268 59 aa3.61□□□□□ -1.83
NOT3YIL038C YBR219CP38317 127 aa3.61□□□□□ -1.83
NOT3YIL038C SHH4Q06236 168 aa3.61□□□□□ -1.83
NOT3YIL038C DYN1P36022 4092 aa3.61□□□□□ -1.83
NOT3YIL038C YLR236CA0A023PZG4 107 aa3.61□□□□□ -1.83
NOT3YIL038C YIL059CP40520 121 aa3.61□□□□□ -1.83
NOT3YIL038C YFL019CP43576 117 aa3.61□□□□□ -1.83
NOT3YIL038C RPS28BP0C0X0 67 aaKnown RBP3.6□□□□□ -1.83
NOT3YIL038C YCR085WP25650 117 aa3.6□□□□□ -1.83
NOT3YIL038C YGL041C-BQ3E750 60 aa3.6□□□□□ -1.83
NOT3YIL038C RPS28AQ3E7X9 67 aaPredicted RBP3.6□□□□□ -1.83
NOT3YIL038C RPL26AP05743 127 aaKnown RBP3.6□□□□□ -1.83
NOT3YIL038C YNL198CP40166 100 aa3.6□□□□□ -1.83
NOT3YIL038C RPL26BP53221 127 aaKnown RBP3.6□□□□□ -1.83
NOT3YIL038C IRA2P19158 3079 aa3.59□□□□□ -1.83
NOT3YIL038C YLR156WP0CE96 114 aa3.59□□□□□ -1.83
NOT3YIL038C YLR159WP0CE97 114 aa3.59□□□□□ -1.83
NOT3YIL038C YLR161WP0CE98 114 aa3.59□□□□□ -1.83
NOT3YIL038C YLL006W-AQ3E814 58 aa3.59□□□□□ -1.83
NOT3YIL038C UBC4P15731 148 aa3.59□□□□□ -1.84
NOT3YIL038C YRA2P36036 203 aaKnown RBP RIP-Chip data3.59□□□□□ -1.84not detected
NOT3YIL038C YPL257WQ08974 193 aa3.59□□□□□ -1.84
NOT3YIL038C YER039C-AP0CD97 72 aa3.58□□□□□ -1.84
NOT3YIL038C YPT53P36019 220 aa3.58□□□□□ -1.84
NOT3YIL038C YBR209WP38311 105 aa3.58□□□□□ -1.84
NOT3YIL038C YLR361C-AQ3E795 98 aa3.58□□□□□ -1.84
NOT3YIL038C MVB12P42939 101 aa3.58□□□□□ -1.84
NOT3YIL038C YLR307C-AQ3E825 87 aa3.58□□□□□ -1.84
NOT3YIL038C AQY2P0CD90 149 aa3.56□□□□□ -1.84
NOT3YIL038C YGL088WP53151 121 aa3.56□□□□□ -1.84
NOT3YIL038C MPC3P53311 146 aa3.56□□□□□ -1.84
NOT3YIL038C MRPL24P36525 258 aaPredicted RBP3.56□□□□□ -1.84
NOT3YIL038C FYV12Q08559 129 aa3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms