RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W AIM19P40502 157 aa2□□□□□ -2.09
TRA1YHR099W YGL235WP53071 178 aa2□□□□□ -2.09
TRA1YHR099W YMR320WQ04897 101 aa2□□□□□ -2.09
TRA1YHR099W YFR054CP43622 192 aa1.99□□□□□ -2.09
TRA1YHR099W YCR050CP25630 102 aa1.99□□□□□ -2.09
TRA1YHR099W ROX3P25046 220 aa1.99□□□□□ -2.09
TRA1YHR099W YAL063C-AQ3E791 96 aa1.99□□□□□ -2.09
TRA1YHR099W FIT2Q08906 153 aa1.99□□□□□ -2.09
TRA1YHR099W YER187WP40102 141 aa1.99□□□□□ -2.09
TRA1YHR099W LCL1Q02786 101 aa1.99□□□□□ -2.09
TRA1YHR099W YLR342W-AQ3E810 57 aa1.99□□□□□ -2.09
TRA1YHR099W YBR032WP38223 100 aa1.99□□□□□ -2.09
TRA1YHR099W NRM1P53718 249 aa1.99□□□□□ -2.09
TRA1YHR099W EST3Q03096 181 aa1.99□□□□□ -2.09
TRA1YHR099W CCH1P50077 2039 aa1.99□□□□□ -2.09
TRA1YHR099W YJL144WP47009 104 aa1.98□□□□□ -2.09
TRA1YHR099W DDR2P89113 61 aa1.98□□□□□ -2.09
TRA1YHR099W YBL008W-AQ3E821 79 aa1.98□□□□□ -2.09
TRA1YHR099W HOT13P36078 116 aa1.98□□□□□ -2.09
TRA1YHR099W RSM18P40033 138 aa1.98□□□□□ -2.09
TRA1YHR099W RPC11Q04307 110 aaPredicted RBP1.98□□□□□ -2.09
TRA1YHR099W SHH4Q06236 168 aa1.98□□□□□ -2.09
TRA1YHR099W SOD1P00445 154 aaKnown RBP1.98□□□□□ -2.09
TRA1YHR099W YDL177CQ12257 170 aa1.98□□□□□ -2.09
TRA1YHR099W YLR285C-AQ3E771 56 aa1.98□□□□□ -2.09
TRA1YHR099W FAS1P07149 2051 aaKnown RBP1.98□□□□□ -2.09
TRA1YHR099W MGR2Q02889 113 aa1.98□□□□□ -2.09
TRA1YHR099W CDC39P25655 2108 aaKnown RBP1.98□□□□□ -2.09
TRA1YHR099W YOR387CQ08910 206 aa1.98□□□□□ -2.09
TRA1YHR099W YNL162W-AQ3E7A8 72 aa1.98□□□□□ -2.09
TRA1YHR099W BLM10P43583 2143 aa1.98□□□□□ -2.09
TRA1YHR099W COX12Q01519 83 aa1.98□□□□□ -2.09
TRA1YHR099W IGD1P43598 195 aa1.98□□□□□ -2.09
TRA1YHR099W YDL211CQ12121 372 aa1.98□□□□□ -2.09
TRA1YHR099W YOR011W-AQ3E807 68 aa1.98□□□□□ -2.09
TRA1YHR099W YHL005CP38752 130 aa1.98□□□□□ -2.09
TRA1YHR099W YJL009WP47078 108 aa1.98□□□□□ -2.09
TRA1YHR099W YLR111WQ12528 110 aa1.98□□□□□ -2.09
TRA1YHR099W IGO1P53897 168 aa1.97□□□□□ -2.09
TRA1YHR099W COX8P04039 78 aa1.97□□□□□ -2.09
TRA1YHR099W SPS100P13130 326 aa1.97□□□□□ -2.09
TRA1YHR099W HSP150P32478 413 aa1.97□□□□□ -2.09
TRA1YHR099W TIM12P32830 109 aa1.97□□□□□ -2.09
TRA1YHR099W YNL184CP53876 108 aa1.97□□□□□ -2.09
TRA1YHR099W CUP1-1P0CX80 61 aa1.97□□□□□ -2.09
TRA1YHR099W CUP1-2P0CX81 61 aa1.97□□□□□ -2.09
TRA1YHR099W YIL163CP40448 117 aa1.97□□□□□ -2.09
TRA1YHR099W YOR268CQ08734 132 aa1.97□□□□□ -2.09
TRA1YHR099W CDD1Q06549 142 aa1.97□□□□□ -2.09
TRA1YHR099W RPA12P32529 125 aaKnown RBP1.97□□□□□ -2.09
TRA1YHR099W YOR343CQ12484 108 aa1.97□□□□□ -2.09
TRA1YHR099W YJL127C-BQ3E828 52 aa1.97□□□□□ -2.09
TRA1YHR099W YFR035CP43608 114 aa1.97□□□□□ -2.09
TRA1YHR099W YHR214C-EQ8TGK0 99 aa1.97□□□□□ -2.09
TRA1YHR099W NCE101Q02820 53 aa1.96□□□□□ -2.1
TRA1YHR099W YHR007C-AQ07074 71 aa1.96□□□□□ -2.1
TRA1YHR099W USV1Q12132 391 aa1.96□□□□□ -2.1
TRA1YHR099W PFY1P07274 126 aa1.96□□□□□ -2.1
TRA1YHR099W YEL014CP39999 101 aa1.96□□□□□ -2.1
TRA1YHR099W YOL118CQ08259 102 aa1.96□□□□□ -2.1
TRA1YHR099W YPL038W-AQ3E7B4 63 aa1.96□□□□□ -2.1
TRA1YHR099W FLO9P39712 1322 aa1.96□□□□□ -2.1
TRA1YHR099W YLR361C-AQ3E795 98 aa1.96□□□□□ -2.1
TRA1YHR099W DSE2P38844 325 aa1.96□□□□□ -2.1
TRA1YHR099W FLO5P38894 1075 aa1.96□□□□□ -2.1
TRA1YHR099W MOH1P38191 138 aa1.96□□□□□ -2.1
TRA1YHR099W YFL015CP43578 164 aa1.96□□□□□ -2.1
TRA1YHR099W YJR146WP47174 117 aa1.96□□□□□ -2.1
TRA1YHR099W YOR381W-AQ3E804 55 aa1.96□□□□□ -2.1
TRA1YHR099W BRR2P32639 2163 aaKnown RBP1.96□□□□□ -2.1
TRA1YHR099W PIR5P46999 287 aa1.95□□□□□ -2.1
TRA1YHR099W YDR034C-AP0C289 58 aa1.95□□□□□ -2.1
TRA1YHR099W IMP1P28627 190 aa1.95□□□□□ -2.1
TRA1YHR099W YBL044WP38194 122 aa1.94□□□□□ -2.1
TRA1YHR099W LIP1Q03579 150 aa1.94□□□□□ -2.1
TRA1YHR099W RPS11AP0CX47 156 aaKnown RBP1.94□□□□□ -2.1
TRA1YHR099W RPS11BP0CX48 156 aaKnown RBP1.94□□□□□ -2.1
TRA1YHR099W SPT4P32914 102 aaPredicted RBP1.94□□□□□ -2.1
TRA1YHR099W SUN4P53616 420 aa1.94□□□□□ -2.1
TRA1YHR099W Q0017Q9ZZX8 53 aa1.94□□□□□ -2.1
TRA1YHR099W POL2P21951 2222 aaKnown RBP1.94□□□□□ -2.1
TRA1YHR099W YCR022CP25620 114 aa1.94□□□□□ -2.1
TRA1YHR099W CMC4Q3E7A9 73 aa1.94□□□□□ -2.1
TRA1YHR099W YNL277W-AQ3E7Z0 62 aa1.94□□□□□ -2.1
TRA1YHR099W ROT1Q03691 256 aa1.94□□□□□ -2.1
TRA1YHR099W YPR013CQ12145 317 aa1.94□□□□□ -2.1
TRA1YHR099W YMR244WQ04018 355 aa1.94□□□□□ -2.1
TRA1YHR099W ATP18P81450 59 aa1.94□□□□□ -2.1
TRA1YHR099W YMR001C-AQ8TGS9 76 aa1.94□□□□□ -2.1
TRA1YHR099W YPR108W-AQ3E7B3 70 aa1.93□□□□□ -2.1
TRA1YHR099W YNL122CP53921 115 aaPredicted RBP1.93□□□□□ -2.1
TRA1YHR099W YKR045CP36138 183 aa1.93□□□□□ -2.1
TRA1YHR099W TIM17P39515 158 aa1.93□□□□□ -2.1
TRA1YHR099W ICY1Q04329 127 aa1.93□□□□□ -2.1
TRA1YHR099W MIG3P39943 394 aa1.93□□□□□ -2.1
TRA1YHR099W PBP4Q07362 185 aaKnown RBP1.93□□□□□ -2.1
TRA1YHR099W COX19Q3E731 98 aa1.93□□□□□ -2.1
TRA1YHR099W YCR006CP25350 157 aa1.93□□□□□ -2.1
TRA1YHR099W KRE9P39005 276 aa1.93□□□□□ -2.1
TRA1YHR099W MRPL27P36526 146 aaPredicted RBP1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 71.7 ms