RNA–Protein interactions for RNA: YHR087W

RTC3, Transcript of Protein of unknown function involved in RNA metabolism, yeastyeast

Gene RTC3, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTC3YHR087W YMR175W-AQ3E766 64 aa10.84□□□□□ -0.67
RTC3YHR087W NHP2P32495 156 aaPredicted RBP10.81□□□□□ -0.68
RTC3YHR087W RPR2P40571 144 aa10.81□□□□□ -0.68
RTC3YHR087W CWP2P43497 92 aa10.81□□□□□ -0.68
RTC3YHR087W RPC10P40422 70 aa10.8□□□□□ -0.68
RTC3YHR087W YMR320WQ04897 101 aa10.8□□□□□ -0.68
RTC3YHR087W YDL241WQ07738 123 aa10.8□□□□□ -0.68
RTC3YHR087W YAL065CO13511 128 aa10.79□□□□□ -0.68
RTC3YHR087W MID2P36027 376 aa10.78□□□□□ -0.68
RTC3YHR087W YGL015CP33199 130 aa10.76□□□□□ -0.69
RTC3YHR087W YHR130CP38834 111 aa10.76□□□□□ -0.69
RTC3YHR087W UBC11P52492 156 aa10.76□□□□□ -0.69
RTC3YHR087W CPR1P14832 162 aaKnown RBP10.75□□□□□ -0.69
RTC3YHR087W CDC43P18898 376 aa10.75□□□□□ -0.69
RTC3YHR087W YLL066W-BQ8TGJ7 56 aa10.75□□□□□ -0.69
RTC3YHR087W YIA6P40556 373 aa10.74□□□□□ -0.69
RTC3YHR087W RGM1Q00453 211 aa10.74□□□□□ -0.69
RTC3YHR087W MET32Q12041 191 aa10.73□□□□□ -0.69
RTC3YHR087W YOR020W-AQ3E824 90 aa10.73□□□□□ -0.69
RTC3YHR087W EOS1P53938 366 aa10.72□□□□□ -0.69
RTC3YHR087W YDR115WQ04598 105 aa10.72□□□□□ -0.69
RTC3YHR087W RTC6O14464 93 aa10.71□□□□□ -0.69
RTC3YHR087W DUT1P33317 147 aa10.71□□□□□ -0.69
RTC3YHR087W YRA2P36036 203 aaKnown RBP RIP-Chip data10.7□□□□□ -0.7not detected
RTC3YHR087W YLL006W-AQ3E814 58 aa10.69□□□□□ -0.7
RTC3YHR087W PBA1Q05778 276 aa10.68□□□□□ -0.7
RTC3YHR087W DIF1O13577 133 aa10.67□□□□□ -0.7
RTC3YHR087W HPA2Q06592 156 aa10.64□□□□□ -0.71
RTC3YHR087W COX10P21592 462 aa10.63□□□□□ -0.71
RTC3YHR087W YBL081WP38180 368 aaKnown RBP10.63□□□□□ -0.71
RTC3YHR087W RPL29P05747 59 aaPredicted RBP10.62□□□□□ -0.71
RTC3YHR087W SVP26P38869 228 aa10.62□□□□□ -0.71
RTC3YHR087W YAL064WP39711 94 aa10.62□□□□□ -0.71
RTC3YHR087W ABF2Q02486 183 aa10.61□□□□□ -0.71
RTC3YHR087W ARO2P28777 376 aaKnown RBP10.59□□□□□ -0.71
RTC3YHR087W MRPL24P36525 258 aaPredicted RBP10.59□□□□□ -0.71
RTC3YHR087W MVB12P42939 101 aa10.59□□□□□ -0.71
RTC3YHR087W HUR1P45820 110 aa10.59□□□□□ -0.71
RTC3YHR087W AQY2P0CD90 149 aa10.57□□□□□ -0.72
RTC3YHR087W SMD1Q02260 146 aaPredicted RBP10.56□□□□□ -0.72
RTC3YHR087W KNH1P50112 268 aa10.54□□□□□ -0.72
RTC3YHR087W RRT15Q3E811 62 aa10.54□□□□□ -0.72
RTC3YHR087W YFL019CP43576 117 aa10.53□□□□□ -0.72
RTC3YHR087W IRC21Q04772 201 aa10.53□□□□□ -0.72
RTC3YHR087W VTS1Q08831 523 aaKnown RBP RIP-Chip data10.53□□□□□ -0.72not detected
RTC3YHR087W YPL229WQ99395 206 aa10.53□□□□□ -0.72
RTC3YHR087W STF1P01098 86 aa10.52□□□□□ -0.73
RTC3YHR087W YBL039W-BP0C268 59 aa10.52□□□□□ -0.73
RTC3YHR087W YAR023CD6VPM8 179 aa10.51□□□□□ -0.73
RTC3YHR087W ICY1Q04329 127 aa10.51□□□□□ -0.73
RTC3YHR087W YLR236CA0A023PZG4 107 aa10.5□□□□□ -0.73
RTC3YHR087W RPL11AP0C0W9 174 aaKnown RBP10.5□□□□□ -0.73
RTC3YHR087W YPL257WQ08974 193 aa10.5□□□□□ -0.73
RTC3YHR087W RPL11BQ3E757 174 aaPredicted RBP10.5□□□□□ -0.73
RTC3YHR087W AIM19P40502 157 aa10.49□□□□□ -0.73
RTC3YHR087W OST2P46964 130 aa10.47□□□□□ -0.73
RTC3YHR087W RPA12P32529 125 aaKnown RBP10.45□□□□□ -0.74
RTC3YHR087W DSE2P38844 325 aa10.45□□□□□ -0.74
RTC3YHR087W UBC4P15731 148 aa10.44□□□□□ -0.74
RTC3YHR087W ATX1P38636 73 aa10.44□□□□□ -0.74
RTC3YHR087W YOR034C-AQ3E735 80 aa10.44□□□□□ -0.74
RTC3YHR087W SLO1Q3E784 85 aa10.44□□□□□ -0.74
RTC3YHR087W YNL162W-AQ3E7A8 72 aa10.43□□□□□ -0.74
RTC3YHR087W MSA2P36157 363 aa10.42□□□□□ -0.74
RTC3YHR087W RUB1Q03919 77 aa10.42□□□□□ -0.74
RTC3YHR087W RPL26AP05743 127 aaKnown RBP10.4□□□□□ -0.74
RTC3YHR087W RPL26BP53221 127 aaKnown RBP10.4□□□□□ -0.74
RTC3YHR087W SNA2P56508 79 aa10.4□□□□□ -0.74
RTC3YHR087W YCR085WP25650 117 aa10.39□□□□□ -0.75
RTC3YHR087W YGL041C-BQ3E750 60 aa10.38□□□□□ -0.75
RTC3YHR087W IGD1P43598 195 aa10.37□□□□□ -0.75
RTC3YHR087W YDR029WQ12111 104 aa10.34□□□□□ -0.75
RTC3YHR087W YLR307C-AQ3E825 87 aa10.34□□□□□ -0.75
RTC3YHR087W Q0032Q9ZZX7 96 aa10.34□□□□□ -0.75
RTC3YHR087W YJR107C-AP0CT86 78 aa10.31□□□□□ -0.76
RTC3YHR087W MPC3P53311 146 aa10.31□□□□□ -0.76
RTC3YHR087W ECM12O13529 151 aa10.29□□□□□ -0.76
RTC3YHR087W INO4P13902 151 aa10.29□□□□□ -0.76
RTC3YHR087W SMP1P38128 452 aa10.29□□□□□ -0.76
RTC3YHR087W FYV5P25585 152 aa10.28□□□□□ -0.76
RTC3YHR087W MRP10O75012 95 aa10.27□□□□□ -0.77
RTC3YHR087W PBI2P0CT04 75 aaKnown RBP10.27□□□□□ -0.77
RTC3YHR087W YDR381C-AQ3E6R5 114 aa10.27□□□□□ -0.77
RTC3YHR087W YBR230W-AQ3E762 66 aa10.27□□□□□ -0.77
RTC3YHR087W YPR195CQ06594 109 aa10.26□□□□□ -0.77
RTC3YHR087W SFT1P43682 97 aa10.25□□□□□ -0.77
RTC3YHR087W YNL042W-BQ3E7Z2 85 aa10.25□□□□□ -0.77
RTC3YHR087W YJL127C-BQ3E828 52 aa10.25□□□□□ -0.77
RTC3YHR087W PEX22P39718 180 aa10.24□□□□□ -0.77
RTC3YHR087W SKI6P46948 246 aaPredicted RBP10.24□□□□□ -0.77
RTC3YHR087W YDR034C-AP0C289 58 aa10.23□□□□□ -0.77
RTC3YHR087W YGL193CP53097 103 aa10.2□□□□□ -0.78
RTC3YHR087W GAT4P40569 121 aa10.19□□□□□ -0.78
RTC3YHR087W ATP18P81450 59 aa10.19□□□□□ -0.78
RTC3YHR087W TSC3Q3E790 80 aa10.19□□□□□ -0.78
RTC3YHR087W YAL063C-AQ3E791 96 aa10.19□□□□□ -0.78
RTC3YHR087W ISD11Q6Q560 94 aa10.19□□□□□ -0.78
RTC3YHR087W SPT4P32914 102 aaPredicted RBP10.15□□□□□ -0.78
RTC3YHR087W GIS2P53849 153 aaKnown RBP RIP-Chip data10.15□□□□□ -0.78not detected
RTC3YHR087W YER039C-AP0CD97 72 aa10.14□□□□□ -0.79
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms