RNA–Protein interactions for RNA: YGR279C

SCW4, Transcript of Cell wall protein with similarity to glucanases, yeastyeast

Gene SCW4, Length 1,161 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCW4YGR279C SCM4P32564 187 aa3.72□□□□□ -1.81
SCW4YGR279C YMR295CQ03559 197 aa3.72□□□□□ -1.81
SCW4YGR279C YBR219CP38317 127 aa3.71□□□□□ -1.82
SCW4YGR279C RPF1P38805 295 aaKnown RBP3.71□□□□□ -1.82
SCW4YGR279C SVP26P38869 228 aa3.71□□□□□ -1.82
SCW4YGR279C VTC1P40046 129 aaRIP-Chip data3.71□□□□□ -1.82not detected
SCW4YGR279C YGL088WP53151 121 aa3.71□□□□□ -1.82
SCW4YGR279C YPL257WQ08974 193 aa3.71□□□□□ -1.82
SCW4YGR279C YAR023CD6VPM8 179 aa3.7□□□□□ -1.82
SCW4YGR279C NAT5Q08689 176 aa3.7□□□□□ -1.82
SCW4YGR279C YGL041C-BQ3E750 60 aa3.7□□□□□ -1.82
SCW4YGR279C RPL18AP0CX49 186 aaKnown RBP3.69□□□□□ -1.82
SCW4YGR279C RPL18BP0CX50 186 aaKnown RBP3.69□□□□□ -1.82
SCW4YGR279C CWP2P43497 92 aa3.69□□□□□ -1.82
SCW4YGR279C YOR020W-AQ3E824 90 aa3.69□□□□□ -1.82
SCW4YGR279C RPL29P05747 59 aaPredicted RBP3.68□□□□□ -1.82
SCW4YGR279C YKL023C-AQ2V2P3 75 aa3.68□□□□□ -1.82
SCW4YGR279C ANB1P19211 157 aa3.67□□□□□ -1.82
SCW4YGR279C OXA1P39952 402 aa3.67□□□□□ -1.82
SCW4YGR279C GLC8P41818 229 aa3.67□□□□□ -1.82
SCW4YGR279C MRPS12P53732 153 aa3.67□□□□□ -1.82
SCW4YGR279C ABF2Q02486 183 aa3.67□□□□□ -1.82
SCW4YGR279C YPL080CQ02826 108 aa3.67□□□□□ -1.82
SCW4YGR279C YLR363W-AQ3E747 85 aa3.67□□□□□ -1.82
SCW4YGR279C YDL022C-AP0C5L6 82 aa3.66□□□□□ -1.82
SCW4YGR279C AQY2P0CD90 149 aa3.66□□□□□ -1.82
SCW4YGR279C UBC11P52492 156 aa3.66□□□□□ -1.82
SCW4YGR279C YNR077CP53758 84 aa3.66□□□□□ -1.82
SCW4YGR279C YDR029WQ12111 104 aa3.66□□□□□ -1.82
SCW4YGR279C YBL039W-BP0C268 59 aa3.65□□□□□ -1.83
SCW4YGR279C YDR034C-AP0C289 58 aa3.65□□□□□ -1.83
SCW4YGR279C UGX2P32772 223 aa3.65□□□□□ -1.83
SCW4YGR279C YAL064WP39711 94 aa3.65□□□□□ -1.83
SCW4YGR279C YFL019CP43576 117 aa3.65□□□□□ -1.83
SCW4YGR279C ELC1Q03071 99 aa3.65□□□□□ -1.83
SCW4YGR279C YLR361C-AQ3E795 98 aa3.65□□□□□ -1.83
SCW4YGR279C COX10P21592 462 aa3.64□□□□□ -1.83
SCW4YGR279C MVB12P42939 101 aa3.64□□□□□ -1.83
SCW4YGR279C SNA2P56508 79 aa3.64□□□□□ -1.83
SCW4YGR279C RGM1Q00453 211 aa3.64□□□□□ -1.83
SCW4YGR279C YLR296WQ05898 108 aa3.64□□□□□ -1.83
SCW4YGR279C RRT15Q3E811 62 aa3.64□□□□□ -1.83
SCW4YGR279C ECM12O13529 151 aa3.63□□□□□ -1.83
SCW4YGR279C YBL081WP38180 368 aaKnown RBP3.63□□□□□ -1.83
SCW4YGR279C YER181CP40097 107 aa3.63□□□□□ -1.83
SCW4YGR279C GAT4P40569 121 aa3.63□□□□□ -1.83
SCW4YGR279C SMD1Q02260 146 aaPredicted RBP3.63□□□□□ -1.83
SCW4YGR279C YIR021W-AQ3E739 70 aa3.63□□□□□ -1.83
SCW4YGR279C YHR130CP38834 111 aa3.62□□□□□ -1.83
SCW4YGR279C YEL067CP39978 195 aa3.62□□□□□ -1.83
SCW4YGR279C YIA6P40556 373 aa3.62□□□□□ -1.83
SCW4YGR279C HPA2Q06592 156 aa3.62□□□□□ -1.83
SCW4YGR279C YPR195CQ06594 109 aa3.62□□□□□ -1.83
SCW4YGR279C SLO1Q3E784 85 aa3.62□□□□□ -1.83
SCW4YGR279C RPL28P02406 149 aaKnown RBP3.61□□□□□ -1.83
SCW4YGR279C RPL26AP05743 127 aaKnown RBP3.61□□□□□ -1.83
SCW4YGR279C YBR121C-AP0C5L4 52 aa3.61□□□□□ -1.83
SCW4YGR279C UBC4P15731 148 aa3.61□□□□□ -1.83
SCW4YGR279C CDC43P18898 376 aa3.61□□□□□ -1.83
SCW4YGR279C RPL26BP53221 127 aaKnown RBP3.61□□□□□ -1.83
SCW4YGR279C YNL190WP53872 204 aa3.61□□□□□ -1.83
SCW4YGR279C YLL006W-AQ3E814 58 aa3.61□□□□□ -1.83
SCW4YGR279C PAI3P01094 68 aa3.6□□□□□ -1.83
SCW4YGR279C YER039C-AP0CD97 72 aa3.6□□□□□ -1.83
SCW4YGR279C MRPL24P36525 258 aaPredicted RBP3.6□□□□□ -1.83
SCW4YGR279C AIM19P40502 157 aa3.6□□□□□ -1.83
SCW4YGR279C LCL1Q02786 101 aa3.6□□□□□ -1.83
SCW4YGR279C ARO2P28777 376 aaKnown RBP3.59□□□□□ -1.83
SCW4YGR279C NHP2P32495 156 aaPredicted RBP3.59□□□□□ -1.83
SCW4YGR279C ICY1Q04329 127 aa3.59□□□□□ -1.83
SCW4YGR279C SFT1P43682 97 aa3.58□□□□□ -1.84
SCW4YGR279C KNH1P50112 268 aa3.58□□□□□ -1.84
SCW4YGR279C LSM6Q06406 86 aaKnown RBP3.58□□□□□ -1.84
SCW4YGR279C YIL102C-AQ2V2P5 75 aa3.58□□□□□ -1.84
SCW4YGR279C Q0032Q9ZZX7 96 aa3.58□□□□□ -1.84
SCW4YGR279C PEX22P39718 180 aa3.57□□□□□ -1.84
SCW4YGR279C YFR057WP43625 151 aa3.57□□□□□ -1.84
SCW4YGR279C YGL193CP53097 103 aa3.57□□□□□ -1.84
SCW4YGR279C YNL184CP53876 108 aa3.57□□□□□ -1.84
SCW4YGR279C GIS2P53849 153 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84 RIP-Chip
SCW4YGR279C IRC21Q04772 201 aa3.56□□□□□ -1.84
SCW4YGR279C LCL2Q08045 131 aa3.56□□□□□ -1.84
SCW4YGR279C YNL162W-AQ3E7A8 72 aa3.56□□□□□ -1.84
SCW4YGR279C YLR307C-AQ3E825 87 aa3.56□□□□□ -1.84
SCW4YGR279C RPS28BP0C0X0 67 aaKnown RBP3.55□□□□□ -1.84
SCW4YGR279C YPR170W-BP0C5R9 85 aa3.55□□□□□ -1.84
SCW4YGR279C CPR1P14832 162 aaKnown RBP3.55□□□□□ -1.84
SCW4YGR279C SMP1P38128 452 aa3.55□□□□□ -1.84
SCW4YGR279C RPS28AQ3E7X9 67 aaPredicted RBP3.55□□□□□ -1.84
SCW4YGR279C YLR236CA0A023PZG4 107 aa3.54□□□□□ -1.84
SCW4YGR279C SPT4P32914 102 aaPredicted RBP3.54□□□□□ -1.84
SCW4YGR279C YNL042W-BQ3E7Z2 85 aa3.54□□□□□ -1.84
SCW4YGR279C FYV5P25585 152 aa3.53□□□□□ -1.84
SCW4YGR279C IGD1P43598 195 aa3.53□□□□□ -1.84
SCW4YGR279C YKL183C-AQ3E765 70 aa3.53□□□□□ -1.84
SCW4YGR279C MDN1Q12019 4910 aaKnown RBP3.53□□□□□ -1.84
SCW4YGR279C HYP2P23301 157 aaKnown RBP3.52□□□□□ -1.85
SCW4YGR279C HUR1P45820 110 aa3.52□□□□□ -1.85
SCW4YGR279C YBL112CQ3E7Y4 105 aa3.52□□□□□ -1.85
SCW4YGR279C RAD6P06104 172 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms