RNA–Protein interactions for RNA: YGR178C

PBP1, Transcript of Component of glucose deprivation induced stress granules, yeastyeast

Gene PBP1, Length 2,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBP1YGR178C YML122CQ03207 126 aa7.55□□□□□ -1.2
PBP1YGR178C YLR285C-AQ3E771 56 aa7.54□□□□□ -1.2
PBP1YGR178C YBR121C-AP0C5L4 52 aa7.54□□□□□ -1.2
PBP1YGR178C YER187WP40102 141 aa7.54□□□□□ -1.2
PBP1YGR178C YPR013CQ12145 317 aa7.54□□□□□ -1.2
PBP1YGR178C YRA2P36036 203 aaKnown RBP RIP-Chip data7.52□□□□□ -1.21not detected
PBP1YGR178C YER135CP40082 130 aa7.52□□□□□ -1.21
PBP1YGR178C IRC21Q04772 201 aa7.5□□□□□ -1.21
PBP1YGR178C ERG28P40030 148 aa7.5□□□□□ -1.21
PBP1YGR178C YLR281CQ05863 155 aa7.5□□□□□ -1.21
PBP1YGR178C TRA1P38811 3744 aa7.5□□□□□ -1.21
PBP1YGR178C RPS28BP0C0X0 67 aaKnown RBP7.49□□□□□ -1.21
PBP1YGR178C RPS28AQ3E7X9 67 aaPredicted RBP7.49□□□□□ -1.21
PBP1YGR178C RPL11AP0C0W9 174 aaKnown RBP7.49□□□□□ -1.21
PBP1YGR178C YJR107C-AP0CT86 78 aa7.49□□□□□ -1.21
PBP1YGR178C YNL146C-AQ3E7Z1 64 aa7.49□□□□□ -1.21
PBP1YGR178C YLR156WP0CE96 114 aa7.47□□□□□ -1.21
PBP1YGR178C YLR159WP0CE97 114 aa7.47□□□□□ -1.21
PBP1YGR178C YLR161WP0CE98 114 aa7.47□□□□□ -1.21
PBP1YGR178C EDC1P53080 175 aaPredicted RBP7.47□□□□□ -1.21
PBP1YGR178C YMR295CQ03559 197 aa7.47□□□□□ -1.21
PBP1YGR178C ALG13P53178 202 aa7.47□□□□□ -1.21
PBP1YGR178C RPL11BQ3E757 174 aaPredicted RBP7.47□□□□□ -1.21
PBP1YGR178C YFR035CP43608 114 aa7.46□□□□□ -1.21
PBP1YGR178C SUT1P53032 299 aaKnown RBP7.46□□□□□ -1.22
PBP1YGR178C YMR175W-AQ3E766 64 aa7.46□□□□□ -1.22
PBP1YGR178C YLR236CA0A023PZG4 107 aa7.45□□□□□ -1.22
PBP1YGR178C BET1P22804 142 aa7.44□□□□□ -1.22
PBP1YGR178C MIG3P39943 394 aa7.44□□□□□ -1.22
PBP1YGR178C YDR246W-AQ3E763 66 aa7.44□□□□□ -1.22
PBP1YGR178C YOR020W-AQ3E824 90 aa7.43□□□□□ -1.22
PBP1YGR178C COX14P39103 70 aa7.43□□□□□ -1.22
PBP1YGR178C RPR2P40571 144 aa7.43□□□□□ -1.22
PBP1YGR178C HAL1Q01766 294 aa7.43□□□□□ -1.22
PBP1YGR178C KTI11Q3E840 82 aa7.43□□□□□ -1.22
PBP1YGR178C YLL006W-AQ3E814 58 aa7.42□□□□□ -1.22
PBP1YGR178C YBR219CP38317 127 aa7.41□□□□□ -1.22
PBP1YGR178C TOS8P53147 276 aa7.41□□□□□ -1.22
PBP1YGR178C MPC3P53311 146 aa7.41□□□□□ -1.22
PBP1YGR178C KSH1Q8TGJ3 72 aa7.41□□□□□ -1.22
PBP1YGR178C YMR244WQ04018 355 aa7.4□□□□□ -1.22
PBP1YGR178C PMP3P87284 55 aa7.4□□□□□ -1.23
PBP1YGR178C ATP20Q12233 115 aa7.4□□□□□ -1.23
PBP1YGR178C AIM4P38305 123 aaPredicted RBP7.39□□□□□ -1.23
PBP1YGR178C COX17Q12287 69 aa7.39□□□□□ -1.23
PBP1YGR178C GCN1P33892 2672 aaKnown RBP7.38□□□□□ -1.23
PBP1YGR178C NUM1Q00402 2748 aa7.38□□□□□ -1.23
PBP1YGR178C CUP1-1P0CX80 61 aa7.37□□□□□ -1.23
PBP1YGR178C CUP1-2P0CX81 61 aa7.37□□□□□ -1.23
PBP1YGR178C RPL38P49167 78 aaKnown RBP7.37□□□□□ -1.23
PBP1YGR178C ATP18P81450 59 aa7.37□□□□□ -1.23
PBP1YGR178C VAM10Q08474 114 aa7.37□□□□□ -1.23
PBP1YGR178C MRPS8Q03799 155 aa7.37□□□□□ -1.23
PBP1YGR178C UBC4P15731 148 aa7.36□□□□□ -1.23
PBP1YGR178C URA2P07259 2214 aaKnown RBP7.35□□□□□ -1.23
PBP1YGR178C SPS100P13130 326 aa7.35□□□□□ -1.23
PBP1YGR178C ERI1P62651 68 aaKnown RBP7.35□□□□□ -1.23
PBP1YGR178C SRL1Q08673 210 aa7.35□□□□□ -1.23
PBP1YGR178C GAT4P40569 121 aa7.34□□□□□ -1.23
PBP1YGR178C YFL019CP43576 117 aa7.34□□□□□ -1.23
PBP1YGR178C YPL278CQ08990 100 aa7.33□□□□□ -1.24
PBP1YGR178C YMR320WQ04897 101 aa7.33□□□□□ -1.24
PBP1YGR178C YLR412C-AQ3E742 68 aa7.32□□□□□ -1.24
PBP1YGR178C YFR009W-AP0C5M9 85 aa7.31□□□□□ -1.24
PBP1YGR178C YAR029WP39549 74 aa7.31□□□□□ -1.24
PBP1YGR178C TDA8Q6B2U8 126 aa7.31□□□□□ -1.24
PBP1YGR178C RPS11AP0CX47 156 aaKnown RBP7.3□□□□□ -1.24
PBP1YGR178C RPS11BP0CX48 156 aaKnown RBP7.3□□□□□ -1.24
PBP1YGR178C RSM18P40033 138 aa7.3□□□□□ -1.24
PBP1YGR178C TMC1Q08422 150 aaPredicted RBP7.3□□□□□ -1.24
PBP1YGR178C YGL260WP53056 76 aa7.3□□□□□ -1.24
PBP1YGR178C SPG4Q04438 115 aa7.3□□□□□ -1.24
PBP1YGR178C YKL183C-AQ3E765 70 aa7.3□□□□□ -1.24
PBP1YGR178C YBR056W-AI2HB52 66 aa7.29□□□□□ -1.24
PBP1YGR178C YIR020CP40575 100 aa7.29□□□□□ -1.24
PBP1YGR178C HOR7Q05827 59 aa7.29□□□□□ -1.24
PBP1YGR178C NOP10Q6Q547 58 aaPredicted RBP7.29□□□□□ -1.24
PBP1YGR178C PRP8P33334 2413 aaKnown RBP7.29□□□□□ -1.24
PBP1YGR178C TAR1Q8TGM6 124 aa7.29□□□□□ -1.24
PBP1YGR178C RSM19P53733 91 aaPredicted RBP7.28□□□□□ -1.24
PBP1YGR178C ICY1Q04329 127 aa7.28□□□□□ -1.24
PBP1YGR178C TDA2P40045 126 aa7.27□□□□□ -1.24
PBP1YGR178C YGR164WP53291 111 aa7.27□□□□□ -1.24
PBP1YGR178C RTG1P32607 177 aa7.26□□□□□ -1.25
PBP1YGR178C YAL065CO13511 128 aa7.25□□□□□ -1.25
PBP1YGR178C YPS5P53057 165 aa7.25□□□□□ -1.25
PBP1YGR178C YOR314WQ12506 109 aa7.25□□□□□ -1.25
PBP1YGR178C TSC3Q3E790 80 aa7.25□□□□□ -1.25
PBP1YGR178C RRT15Q3E811 62 aa7.25□□□□□ -1.25
PBP1YGR178C YOR268CQ08734 132 aa7.24□□□□□ -1.25
PBP1YGR178C TIM10P87108 93 aa7.23□□□□□ -1.25
PBP1YGR178C SFT1P43682 97 aa7.23□□□□□ -1.25
PBP1YGR178C CRC1Q12289 327 aa7.21□□□□□ -1.26
PBP1YGR178C RPL26AP05743 127 aaKnown RBP7.2□□□□□ -1.26
PBP1YGR178C RPL26BP53221 127 aaKnown RBP7.2□□□□□ -1.26
PBP1YGR178C YMR122W-AQ3E842 84 aa7.2□□□□□ -1.26
PBP1YGR178C MEC1P38111 2368 aa7.2□□□□□ -1.26
PBP1YGR178C SMD1Q02260 146 aaPredicted RBP7.19□□□□□ -1.26
PBP1YGR178C ICS3P47034 131 aa7.18□□□□□ -1.26
PBP1YGR178C RPL29P05747 59 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 194.1 ms