RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W YGL014C-AP0C5N1 53 aa1.68□□□□□ -2.14
PTI1YGR156W RPS11AP0CX47 156 aaKnown RBP1.68□□□□□ -2.14
PTI1YGR156W RPS11BP0CX48 156 aaKnown RBP1.68□□□□□ -2.14
PTI1YGR156W GSP1P32835 219 aaKnown RBP1.68□□□□□ -2.14
PTI1YGR156W HSP10P38910 106 aa1.68□□□□□ -2.14
PTI1YGR156W LST8P41318 303 aa1.68□□□□□ -2.14
PTI1YGR156W UGX2P32772 223 aa1.67□□□□□ -2.14
PTI1YGR156W YIR021W-AQ3E739 70 aa1.67□□□□□ -2.14
PTI1YGR156W YGR240C-AQ3E786 66 aa1.67□□□□□ -2.14
PTI1YGR156W MED11Q99278 115 aa1.67□□□□□ -2.14
PTI1YGR156W RPL33AP05744 107 aaKnown RBP1.66□□□□□ -2.14
PTI1YGR156W YJL197C-AP0C5P0 93 aa1.66□□□□□ -2.14
PTI1YGR156W ANB1P19211 157 aa1.66□□□□□ -2.14
PTI1YGR156W YBR013CP38215 129 aa1.66□□□□□ -2.14
PTI1YGR156W ARL3Q02804 198 aa1.66□□□□□ -2.14
PTI1YGR156W COA4Q05809 96 aa1.66□□□□□ -2.14
PTI1YGR156W CCW12Q12127 133 aa1.66□□□□□ -2.14
PTI1YGR156W YOR192C-CQ3E736 78 aa1.66□□□□□ -2.14
PTI1YGR156W YOR376W-AQ3E805 51 aa1.66□□□□□ -2.14
PTI1YGR156W RUB1Q03919 77 aa1.65□□□□□ -2.15
PTI1YGR156W YOL118CQ08259 102 aa1.65□□□□□ -2.15
PTI1YGR156W SCP1Q08873 200 aa1.65□□□□□ -2.15
PTI1YGR156W YPR010C-AA5Z2X5 72 aa1.64□□□□□ -2.15
PTI1YGR156W YOR304C-AO14468 76 aa1.64□□□□□ -2.15
PTI1YGR156W ERV14P53173 138 aa1.64□□□□□ -2.15
PTI1YGR156W BRP1P53194 125 aa1.64□□□□□ -2.15
PTI1YGR156W ERI1P62651 68 aaKnown RBP1.64□□□□□ -2.15
PTI1YGR156W YMR007WQ03675 126 aa1.64□□□□□ -2.15
PTI1YGR156W YMR122CQ03879 124 aa1.64□□□□□ -2.15
PTI1YGR156W YLR042CQ07990 161 aa1.64□□□□□ -2.15
PTI1YGR156W YLR118CQ12354 227 aa1.64□□□□□ -2.15
PTI1YGR156W RTC6O14464 93 aa1.63□□□□□ -2.15
PTI1YGR156W PAU21P0CE86 164 aa1.63□□□□□ -2.15
PTI1YGR156W PAU22P0CE87 164 aa1.63□□□□□ -2.15
PTI1YGR156W SEC59P20048 519 aa1.63□□□□□ -2.15
PTI1YGR156W MRP17P28778 131 aa1.63□□□□□ -2.15
PTI1YGR156W MRPL11P36521 249 aaPredicted RBP1.63□□□□□ -2.15
PTI1YGR156W YPR145C-AQ2V2P0 78 aa1.63□□□□□ -2.15
PTI1YGR156W HUG1Q6Q5K6 68 aa1.63□□□□□ -2.15
PTI1YGR156W YHR213WP0CI67 198 aa1.62□□□□□ -2.15
PTI1YGR156W HAP3P13434 144 aa1.62□□□□□ -2.15
PTI1YGR156W EMP24P32803 203 aaKnown RBP1.62□□□□□ -2.15
PTI1YGR156W YKL044WP36092 106 aa1.62□□□□□ -2.15
PTI1YGR156W AIM4P38305 123 aaPredicted RBP1.62□□□□□ -2.15
PTI1YGR156W RPB11P38902 120 aa1.62□□□□□ -2.15
PTI1YGR156W IMP2P46972 177 aa1.62□□□□□ -2.15
PTI1YGR156W YAR064WP39563 99 aa1.61□□□□□ -2.15
PTI1YGR156W AIM11P87275 137 aa1.61□□□□□ -2.15
PTI1YGR156W LCL1Q02786 101 aa1.61□□□□□ -2.15
PTI1YGR156W YOR011W-AQ3E807 68 aa1.61□□□□□ -2.15
PTI1YGR156W SUS1Q6WNK7 96 aa1.61□□□□□ -2.15
PTI1YGR156W YOL013W-AP0C272 63 aaPredicted RBP1.6□□□□□ -2.15
PTI1YGR156W YER039C-AP0CD97 72 aa1.6□□□□□ -2.15
PTI1YGR156W YCR001WP25347 104 aa1.6□□□□□ -2.15
PTI1YGR156W EMC5P40540 141 aa1.6□□□□□ -2.15
PTI1YGR156W APS2Q00381 147 aa1.6□□□□□ -2.15
PTI1YGR156W GPI19Q04082 140 aa1.6□□□□□ -2.15
PTI1YGR156W YLR296WQ05898 108 aa1.6□□□□□ -2.15
PTI1YGR156W YPL225WQ08971 146 aaKnown RBP1.6□□□□□ -2.15
PTI1YGR156W FYV7Q12247 151 aa1.6□□□□□ -2.15
PTI1YGR156W KTI11Q3E840 82 aa1.6□□□□□ -2.15
PTI1YGR156W HUA1P40325 198 aa1.59□□□□□ -2.15
PTI1YGR156W TOM7P53507 60 aa1.59□□□□□ -2.15
PTI1YGR156W RPL36BO14455 100 aaKnown RBP1.58□□□□□ -2.16
PTI1YGR156W RPL36AP05745 100 aaPredicted RBP1.58□□□□□ -2.16
PTI1YGR156W YDR034C-AP0C289 58 aa1.58□□□□□ -2.16
PTI1YGR156W MIC27P50945 234 aa1.58□□□□□ -2.16
PTI1YGR156W YMR090WQ04304 227 aaKnown RBP1.58□□□□□ -2.16
PTI1YGR156W YLL066W-BQ8TGJ7 56 aa1.58□□□□□ -2.16
PTI1YGR156W TDA2P40045 126 aa1.57□□□□□ -2.16
PTI1YGR156W SPI1P40092 148 aa1.57□□□□□ -2.16
PTI1YGR156W SWM2P40342 146 aa1.57□□□□□ -2.16
PTI1YGR156W YIL102CP40488 101 aa1.57□□□□□ -2.16
PTI1YGR156W IRC21Q04772 201 aa1.57□□□□□ -2.16
PTI1YGR156W FCF2Q12035 217 aaPredicted RBP1.57□□□□□ -2.16
PTI1YGR156W YHR213W-AQ8TGT4 77 aa1.57□□□□□ -2.16
PTI1YGR156W YAR029WP39549 74 aa1.56□□□□□ -2.16
PTI1YGR156W PAM16P42949 149 aa1.56□□□□□ -2.16
PTI1YGR156W YNL122CP53921 115 aaPredicted RBP1.56□□□□□ -2.16
PTI1YGR156W YIL014C-AQ02598 104 aa1.56□□□□□ -2.16
PTI1YGR156W HPA2Q06592 156 aa1.56□□□□□ -2.16
PTI1YGR156W YMR122W-AQ3E842 84 aa1.56□□□□□ -2.16
PTI1YGR156W PFY1P07274 126 aa1.55□□□□□ -2.16
PTI1YGR156W QCR9P22289 66 aa1.55□□□□□ -2.16
PTI1YGR156W YHR130CP38834 111 aa1.55□□□□□ -2.16
PTI1YGR156W SNU13P39990 126 aaKnown RBP1.55□□□□□ -2.16
PTI1YGR156W YLR194CQ05777 254 aa1.55□□□□□ -2.16
PTI1YGR156W YCL001W-BQ96VH2 84 aa1.55□□□□□ -2.16
PTI1YGR156W YLR307C-AQ3E825 87 aa1.54□□□□□ -2.16
PTI1YGR156W RPL37AP49166 88 aaKnown RBP1.53□□□□□ -2.16
PTI1YGR156W YDR029WQ12111 104 aa1.53□□□□□ -2.16
PTI1YGR156W POC4Q12245 148 aaPredicted RBP1.53□□□□□ -2.16
PTI1YGR156W YLR342W-AQ3E810 57 aa1.53□□□□□ -2.16
PTI1YGR156W PCC1Q3E833 88 aa1.53□□□□□ -2.16
PTI1YGR156W UBC5P15732 148 aa1.52□□□□□ -2.17
PTI1YGR156W HHY1P39982 102 aa1.52□□□□□ -2.17
PTI1YGR156W PMP3P87284 55 aa1.52□□□□□ -2.17
PTI1YGR156W YMR082CQ04276 118 aa1.52□□□□□ -2.17
PTI1YGR156W ZEO1Q08245 113 aa1.52□□□□□ -2.17
PTI1YGR156W YGL041C-BQ3E750 60 aa1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms