RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeastyeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC43YGL155W YOR020W-AQ3E824 90 aa4.01□□□□□ -1.77
CDC43YGL155W MRPL24P36525 258 aaPredicted RBP4□□□□□ -1.77
CDC43YGL155W KRE9P39005 276 aa4□□□□□ -1.77
CDC43YGL155W RGM1Q00453 211 aa4□□□□□ -1.77
CDC43YGL155W YMR122W-AQ3E842 84 aa4□□□□□ -1.77
CDC43YGL155W GCN1P33892 2672 aaKnown RBP3.99□□□□□ -1.77
CDC43YGL155W DIF1O13577 133 aa3.99□□□□□ -1.77
CDC43YGL155W TOA2P32774 122 aa3.99□□□□□ -1.77
CDC43YGL155W DSE2P38844 325 aa3.99□□□□□ -1.77
CDC43YGL155W COX14P39103 70 aa3.99□□□□□ -1.77
CDC43YGL155W RPR2P40571 144 aa3.99□□□□□ -1.77
CDC43YGL155W CWP2P43497 92 aa3.99□□□□□ -1.77
CDC43YGL155W YMR295CQ03559 197 aa3.99□□□□□ -1.77
CDC43YGL155W ENV10Q99382 181 aa3.99□□□□□ -1.77
CDC43YGL155W AIM19P40502 157 aa3.98□□□□□ -1.77
CDC43YGL155W YDR274CP87283 123 aa3.97□□□□□ -1.77
CDC43YGL155W VAM10Q08474 114 aa3.97□□□□□ -1.77
CDC43YGL155W TRA1P38811 3744 aa3.96□□□□□ -1.77
CDC43YGL155W PBI2P0CT04 75 aaKnown RBP3.96□□□□□ -1.78
CDC43YGL155W SVP26P38869 228 aa3.96□□□□□ -1.78
CDC43YGL155W ERG28P40030 148 aa3.96□□□□□ -1.78
CDC43YGL155W SKI6P46948 246 aaPredicted RBP3.96□□□□□ -1.78
CDC43YGL155W UBC11P52492 156 aa3.96□□□□□ -1.78
CDC43YGL155W YAL063C-AQ3E791 96 aa3.96□□□□□ -1.78
CDC43YGL155W YFL041W-AQ3E817 63 aa3.96□□□□□ -1.78
CDC43YGL155W KRE1P17260 313 aa3.95□□□□□ -1.78
CDC43YGL155W COX12Q01519 83 aa3.95□□□□□ -1.78
CDC43YGL155W PBA1Q05778 276 aa3.95□□□□□ -1.78
CDC43YGL155W YDL241WQ07738 123 aa3.95□□□□□ -1.78
CDC43YGL155W CRC1Q12289 327 aa3.95□□□□□ -1.78
CDC43YGL155W YMR175W-AQ3E766 64 aa3.95□□□□□ -1.78
CDC43YGL155W YGR035W-AQ45U48 73 aa3.95□□□□□ -1.78
CDC43YGL155W YCR001WP25347 104 aa3.94□□□□□ -1.78
CDC43YGL155W MSA2P36157 363 aa3.94□□□□□ -1.78
CDC43YGL155W YBR219CP38317 127 aa3.94□□□□□ -1.78
CDC43YGL155W YAR1P46683 200 aa3.94□□□□□ -1.78
CDC43YGL155W YLL006W-AQ3E814 58 aa3.94□□□□□ -1.78
CDC43YGL155W YPR010C-AA5Z2X5 72 aa3.93□□□□□ -1.78
CDC43YGL155W YNL184CP53876 108 aa3.93□□□□□ -1.78
CDC43YGL155W YAL065CO13511 128 aa3.92□□□□□ -1.78
CDC43YGL155W YHR139C-AO13536 103 aa3.92□□□□□ -1.78
CDC43YGL155W KNH1P50112 268 aa3.92□□□□□ -1.78
CDC43YGL155W SGF11Q03067 99 aa3.92□□□□□ -1.78
CDC43YGL155W YDR381C-AQ3E6R5 114 aa3.92□□□□□ -1.78
CDC43YGL155W YPL229WQ99395 206 aa3.92□□□□□ -1.78
CDC43YGL155W URA2P07259 2214 aaKnown RBP3.91□□□□□ -1.78
CDC43YGL155W YOR304C-AO14468 76 aa3.91□□□□□ -1.78
CDC43YGL155W IRC21Q04772 201 aa3.91□□□□□ -1.78
CDC43YGL155W RDS3Q06835 107 aaPredicted RBP3.91□□□□□ -1.78
CDC43YGL155W YLR236CA0A023PZG4 107 aa3.9□□□□□ -1.79
CDC43YGL155W YJR107C-AP0CT86 78 aa3.9□□□□□ -1.79
CDC43YGL155W YCL042WP25572 119 aa3.9□□□□□ -1.79
CDC43YGL155W RPC10P40422 70 aa3.9□□□□□ -1.79
CDC43YGL155W SPC1P46965 94 aa3.9□□□□□ -1.79
CDC43YGL155W HAL1Q01766 294 aa3.9□□□□□ -1.79
CDC43YGL155W SMD1Q02260 146 aaPredicted RBP3.9□□□□□ -1.79
CDC43YGL155W ICY1Q04329 127 aa3.9□□□□□ -1.79
CDC43YGL155W EMC6Q12431 108 aa3.9□□□□□ -1.79
CDC43YGL155W RPL29P05747 59 aaPredicted RBP3.89□□□□□ -1.79
CDC43YGL155W RAD6P06104 172 aa3.89□□□□□ -1.79
CDC43YGL155W COF1Q03048 143 aaKnown RBP3.89□□□□□ -1.79
CDC43YGL155W YOR034C-AQ3E735 80 aa3.89□□□□□ -1.79
CDC43YGL155W RPL26AP05743 127 aaKnown RBP3.88□□□□□ -1.79
CDC43YGL155W YHL042WP38729 150 aa3.88□□□□□ -1.79
CDC43YGL155W MVB12P42939 101 aa3.88□□□□□ -1.79
CDC43YGL155W RPL26BP53221 127 aaKnown RBP3.88□□□□□ -1.79
CDC43YGL155W YGR039WP53225 103 aa3.88□□□□□ -1.79
CDC43YGL155W YMR320WQ04897 101 aa3.88□□□□□ -1.79
CDC43YGL155W RPL33AP05744 107 aaKnown RBP3.87□□□□□ -1.79
CDC43YGL155W RPL33BP41056 107 aaKnown RBP3.87□□□□□ -1.79
CDC43YGL155W TSC3Q3E790 80 aa3.87□□□□□ -1.79
CDC43YGL155W YBL039W-BP0C268 59 aa3.86□□□□□ -1.79
CDC43YGL155W AQY2P0CD90 149 aa3.86□□□□□ -1.79
CDC43YGL155W SMP1P38128 452 aa3.86□□□□□ -1.79
CDC43YGL155W YFL019CP43576 117 aa3.86□□□□□ -1.79
CDC43YGL155W YLR281CQ05863 155 aa3.86□□□□□ -1.79
CDC43YGL155W SHH4Q06236 168 aa3.86□□□□□ -1.79
CDC43YGL155W MPC3P53311 146 aa3.85□□□□□ -1.79
CDC43YGL155W YAL064WP39711 94 aa3.84□□□□□ -1.79
CDC43YGL155W SFT1P43682 97 aa3.84□□□□□ -1.79
CDC43YGL155W ATP18P81450 59 aa3.84□□□□□ -1.79
CDC43YGL155W YDR119W-AQ2V2P9 66 aa3.84□□□□□ -1.79
CDC43YGL155W TEL1P38110 2787 aa3.83□□□□□ -1.8
CDC43YGL155W YSY6P38374 65 aa3.83□□□□□ -1.8
CDC43YGL155W RSM19P53733 91 aaPredicted RBP3.83□□□□□ -1.8
CDC43YGL155W RTC6O14464 93 aa3.82□□□□□ -1.8
CDC43YGL155W UBC4P15731 148 aa3.82□□□□□ -1.8
CDC43YGL155W YPL038W-AQ3E7B4 63 aa3.82□□□□□ -1.8
CDC43YGL155W YLR285C-AQ3E771 56 aa3.81□□□□□ -1.8
CDC43YGL155W PRP8P33334 2413 aaKnown RBP3.81□□□□□ -1.8
CDC43YGL155W STF1P01098 86 aa3.8□□□□□ -1.8
CDC43YGL155W FYV5P25585 152 aa3.8□□□□□ -1.8
CDC43YGL155W GAT4P40569 121 aa3.8□□□□□ -1.8
CDC43YGL155W YDR115WQ04598 105 aa3.8□□□□□ -1.8
CDC43YGL155W YIR021W-AQ3E739 70 aa3.8□□□□□ -1.8
CDC43YGL155W YNL162W-AQ3E7A8 72 aa3.8□□□□□ -1.8
CDC43YGL155W CUP1-1P0CX80 61 aa3.79□□□□□ -1.8
CDC43YGL155W CUP1-2P0CX81 61 aa3.79□□□□□ -1.8
CDC43YGL155W TOM6P33448 61 aa3.79□□□□□ -1.8
CDC43YGL155W YBL081WP38180 368 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms