RNA–Protein interactions for RNA: YDR495C

VPS3, Transcript of Component of CORVET membrane tethering complex, yeastyeast

Gene VPS3, Length 3,036 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS3YDR495C RPS22AP0C0W1 130 aaKnown RBP1.85□□□□□ -2.11
VPS3YDR495C HMRA2P0CY13 119 aa1.85□□□□□ -2.11
VPS3YDR495C ICS3P47034 131 aa1.85□□□□□ -2.11
VPS3YDR495C RPL22AP05749 121 aaKnown RBP1.84□□□□□ -2.11
VPS3YDR495C YIL163CP40448 117 aa1.84□□□□□ -2.11
VPS3YDR495C YMR321CQ04898 105 aa1.84□□□□□ -2.11
VPS3YDR495C COA4Q05809 96 aa1.84□□□□□ -2.11
VPS3YDR495C CUP1-1P0CX80 61 aa1.84□□□□□ -2.12
VPS3YDR495C CUP1-2P0CX81 61 aa1.84□□□□□ -2.12
VPS3YDR495C YLR162WQ06235 118 aa1.84□□□□□ -2.12
VPS3YDR495C YCL048W-AQ2V2Q2 79 aa1.84□□□□□ -2.12
VPS3YDR495C CYR1P08678 2026 aaKnown RBP1.83□□□□□ -2.12
VPS3YDR495C YOL118CQ08259 102 aa1.83□□□□□ -2.12
VPS3YDR495C COA3Q3E7B2 85 aa1.83□□□□□ -2.12
VPS3YDR495C UBR2Q07963 1872 aa1.83□□□□□ -2.12
VPS3YDR495C IQG1Q12280 1495 aa1.83□□□□□ -2.12
VPS3YDR495C LSM6Q06406 86 aaKnown RBP1.83□□□□□ -2.12
VPS3YDR495C YNL146C-AQ3E7Z1 64 aa1.83□□□□□ -2.12
VPS3YDR495C YSF3P0C074 85 aaPredicted RBP1.82□□□□□ -2.12
VPS3YDR495C TOM6P33448 61 aa1.82□□□□□ -2.12
VPS3YDR495C MRPL38P35996 138 aaPredicted RBP1.82□□□□□ -2.12
VPS3YDR495C YBR013CP38215 129 aa1.82□□□□□ -2.12
VPS3YDR495C VPS55P47111 140 aa1.82□□□□□ -2.12
VPS3YDR495C LSM2P38203 95 aaKnown RBP1.81□□□□□ -2.12
VPS3YDR495C MLP1Q02455 1875 aaKnown RBP1.81□□□□□ -2.12
VPS3YDR495C CCW14O13547 238 aa1.81□□□□□ -2.12
VPS3YDR495C YDR119W-AQ2V2P9 66 aa1.81□□□□□ -2.12
VPS3YDR495C YCR095W-AQ3E787 52 aa1.81□□□□□ -2.12
VPS3YDR495C FAB1P34756 2278 aa1.8□□□□□ -2.12
VPS3YDR495C RPS22BQ3E7Y3 130 aaKnown RBP1.8□□□□□ -2.12
VPS3YDR495C CCW12Q12127 133 aa1.8□□□□□ -2.12
VPS3YDR495C FAS2P19097 1887 aaKnown RBP1.79□□□□□ -2.12
VPS3YDR495C YDR210WQ03482 75 aa1.79□□□□□ -2.12
VPS3YDR495C NHP2P32495 156 aaPredicted RBP1.79□□□□□ -2.12
VPS3YDR495C MRPS12P53732 153 aa1.79□□□□□ -2.12
VPS3YDR495C GIS2P53849 153 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
VPS3YDR495C PAI3P01094 68 aa1.77□□□□□ -2.13
VPS3YDR495C SPC1P46965 94 aa1.77□□□□□ -2.13
VPS3YDR495C YOR343CQ12484 108 aa1.77□□□□□ -2.13
VPS3YDR495C LCL2Q08045 131 aa1.76□□□□□ -2.13
VPS3YDR495C YDR381C-AQ3E6R5 114 aa1.76□□□□□ -2.13
VPS3YDR495C MHF2Q3E829 80 aa1.76□□□□□ -2.13
VPS3YDR495C MIC27P50945 234 aa1.76□□□□□ -2.13
VPS3YDR495C IRC21Q04772 201 aa1.76□□□□□ -2.13
VPS3YDR495C YPR145C-AQ2V2P0 78 aa1.76□□□□□ -2.13
VPS3YDR495C ECM29P38737 1868 aa1.75□□□□□ -2.13
VPS3YDR495C PAU6P0CE90 120 aa1.75□□□□□ -2.13
VPS3YDR495C PAU18P0CE91 120 aa1.75□□□□□ -2.13
VPS3YDR495C YHR214C-DP0CX93 97 aa1.75□□□□□ -2.13
VPS3YDR495C MRP17P28778 131 aa1.75□□□□□ -2.13
VPS3YDR495C YBL071CP38185 102 aa1.75□□□□□ -2.13
VPS3YDR495C TY4B-JP47024 1803 aa1.75□□□□□ -2.13
VPS3YDR495C MRX7P53869 86 aa1.75□□□□□ -2.13
VPS3YDR495C SNA2P56508 79 aa1.75□□□□□ -2.13
VPS3YDR495C YGL041C-BQ3E750 60 aa1.75□□□□□ -2.13
VPS3YDR495C SLH1P53327 1967 aaKnown RBP1.75□□□□□ -2.13
VPS3YDR495C YFR010W-AP0C5N0 62 aa1.74□□□□□ -2.13
VPS3YDR495C YNL122CP53921 115 aaPredicted RBP1.74□□□□□ -2.13
VPS3YDR495C FIG2P25653 1609 aa1.74□□□□□ -2.13
VPS3YDR495C SWM2P40342 146 aa1.73□□□□□ -2.13
VPS3YDR495C YGR240C-AQ3E786 66 aa1.73□□□□□ -2.13
VPS3YDR495C RRP5Q05022 1729 aaKnown RBP1.73□□□□□ -2.13
VPS3YDR495C YHR212W-AP0CX91 67 aa1.72□□□□□ -2.13
VPS3YDR495C YJL009WP47078 108 aa1.72□□□□□ -2.13
VPS3YDR495C ACC1Q00955 2233 aaKnown RBP1.72□□□□□ -2.13
VPS3YDR495C YPL038W-AQ3E7B4 63 aa1.72□□□□□ -2.13
VPS3YDR495C YLR255CO13574 117 aa1.71□□□□□ -2.14
VPS3YDR495C NUP192P47054 1683 aa1.71□□□□□ -2.14
VPS3YDR495C YBR292CP38357 123 aa1.71□□□□□ -2.14
VPS3YDR495C COX12Q01519 83 aa1.71□□□□□ -2.14
VPS3YDR495C YOR314WQ12506 109 aa1.71□□□□□ -2.14
VPS3YDR495C YNR034W-AQ3E841 98 aa1.71□□□□□ -2.14
VPS3YDR495C YER188C-AP0C0V2 99 aa1.7□□□□□ -2.14
VPS3YDR495C RPS11AP0CX47 156 aaKnown RBP1.7□□□□□ -2.14
VPS3YDR495C RPS11BP0CX48 156 aaKnown RBP1.7□□□□□ -2.14
VPS3YDR495C MPC2P38857 129 aa1.69□□□□□ -2.14
VPS3YDR495C PDX3P38075 228 aaKnown RBP1.69□□□□□ -2.14
VPS3YDR495C AIM19P40502 157 aa1.69□□□□□ -2.14
VPS3YDR495C RIM15P43565 1770 aa1.69□□□□□ -2.14
VPS3YDR495C YAL065CO13511 128 aa1.69□□□□□ -2.14
VPS3YDR495C ATX1P38636 73 aa1.69□□□□□ -2.14
VPS3YDR495C URB1P34241 1764 aaKnown RBP1.68□□□□□ -2.14
VPS3YDR495C BSC4P53841 131 aa1.68□□□□□ -2.14
VPS3YDR495C YGR121W-AQ3E816 71 aa1.68□□□□□ -2.14
VPS3YDR495C AQY2P0CD90 149 aa1.68□□□□□ -2.14
VPS3YDR495C PAU8P0CE92 120 aa1.68□□□□□ -2.14
VPS3YDR495C PAU11P0CE93 120 aa1.68□□□□□ -2.14
VPS3YDR495C PAU13P38725 120 aa1.68□□□□□ -2.14
VPS3YDR495C PAU4P53427 120 aa1.68□□□□□ -2.14
VPS3YDR495C PAU10Q03050 120 aa1.68□□□□□ -2.14
VPS3YDR495C PAU23Q07987 124 aa1.68□□□□□ -2.14
VPS3YDR495C PAU17Q12370 124 aa1.68□□□□□ -2.14
VPS3YDR495C YKL065W-AQ2V2P2 73 aa1.68□□□□□ -2.14
VPS3YDR495C PAU9Q3E770 120 aa1.68□□□□□ -2.14
VPS3YDR495C YFL041W-AQ3E817 63 aa1.68□□□□□ -2.14
VPS3YDR495C STT4P37297 1900 aa1.68□□□□□ -2.14
VPS3YDR495C YOL131WQ08270 108 aa1.67□□□□□ -2.14
VPS3YDR495C MRPL31P14063 131 aaPredicted RBP1.67□□□□□ -2.14
VPS3YDR495C PMD1P32634 1753 aa1.66□□□□□ -2.14
VPS3YDR495C LCL1Q02786 101 aa1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 134.5 ms