RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	SPC1	P46965	94 aa		0.52	□□□□□ -2.33
NSE3	YDR288W	PAU4	P53427	120 aa		0.52	□□□□□ -2.33
NSE3	YDR288W	MRX7	P53869	86 aa		0.52	□□□□□ -2.33
NSE3	YDR288W	COX12	Q01519	83 aa		0.52	□□□□□ -2.33
NSE3	YDR288W	YOL164W-A	Q3E7A5	60 aa		0.52	□□□□□ -2.33
NSE3	YDR288W	YLR419W	Q06698	1435 aa	Known RBP	0.52	□□□□□ -2.33
NSE3	YDR288W	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.52	□□□□□ -2.33
NSE3	YDR288W	DNF1	P32660	1571 aa		0.52	□□□□□ -2.33
NSE3	YDR288W	IRC20	Q06554	1556 aa		0.52	□□□□□ -2.33
NSE3	YDR288W	TY1B-DR5	P0C2I2	1755 aa		0.52	□□□□□ -2.33
NSE3	YDR288W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	0.52	□□□□□ -2.33
NSE3	YDR288W	UTP10	P42945	1769 aa	Known RBP	0.52	□□□□□ -2.33
NSE3	YDR288W	TY1B-JR1	P47098	1755 aa		0.52	□□□□□ -2.33
NSE3	YDR288W	TY1B-ML2	Q03434	1755 aa	Known RBP	0.52	□□□□□ -2.33
NSE3	YDR288W	TY1B-ER1	Q03612	1755 aa		0.52	□□□□□ -2.33
NSE3	YDR288W	TY1B-ER2	Q03619	1755 aa		0.52	□□□□□ -2.33
NSE3	YDR288W	TY1B-DR1	Q03855	1755 aa		0.52	□□□□□ -2.33
NSE3	YDR288W	TY1B-ML1	Q04711	1755 aa	Known RBP	0.52	□□□□□ -2.33
NSE3	YDR288W	TY1B-LR1	Q12088	1755 aa	Known RBP	0.52	□□□□□ -2.33
NSE3	YDR288W	TY1B-GR2	Q12269	1755 aa		0.52	□□□□□ -2.33
NSE3	YDR288W	TY1B-OL	Q12273	1755 aa		0.52	□□□□□ -2.33
NSE3	YDR288W	TY1B-DR3	Q99231	1755 aa		0.52	□□□□□ -2.33
NSE3	YDR288W	ECM12	O13529	151 aa		0.51	□□□□□ -2.33
NSE3	YDR288W	IRA1	P18963	3092 aa		0.51	□□□□□ -2.33
NSE3	YDR288W	POL2	P21951	2222 aa	Known RBP	0.51	□□□□□ -2.33
NSE3	YDR288W	SHU1	P38751	150 aa		0.51	□□□□□ -2.33
NSE3	YDR288W	NHP10	Q03435	203 aa		0.51	□□□□□ -2.33
NSE3	YDR288W	TY2B-DR2	Q03494	1770 aa		0.51	□□□□□ -2.33
NSE3	YDR288W	MIX14	Q04341	121 aa		0.51	□□□□□ -2.33
NSE3	YDR288W	TY2B-DR3	Q07791	1770 aa	Known RBP	0.51	□□□□□ -2.33
NSE3	YDR288W	YOR289W	Q12012	251 aa	Predicted RBP	0.51	□□□□□ -2.33
NSE3	YDR288W	TY2B-OR1	Q12113	1770 aa		0.51	□□□□□ -2.33
NSE3	YDR288W	TY2B-DR1	Q12472	1770 aa		0.51	□□□□□ -2.33
NSE3	YDR288W	TY2B-OR2	Q12501	1770 aa		0.51	□□□□□ -2.33
NSE3	YDR288W	SEN1	Q00416	2231 aa	Known RBP	0.5	□□□□□ -2.33
NSE3	YDR288W	PMD1	P32634	1753 aa		0.5	□□□□□ -2.33
NSE3	YDR288W	SRB8	P25648	1427 aa		0.5	□□□□□ -2.33
NSE3	YDR288W	YHR214C-D	P0CX93	97 aa		0.5	□□□□□ -2.33
NSE3	YDR288W	ROX3	P25046	220 aa		0.5	□□□□□ -2.33
NSE3	YDR288W	RSM18	P40033	138 aa		0.5	□□□□□ -2.33
NSE3	YDR288W	YIL086C	P40503	102 aa		0.5	□□□□□ -2.33
NSE3	YDR288W	YGL194C-A	Q2V2P6	80 aa		0.5	□□□□□ -2.33
NSE3	YDR288W	YCR075W-A	Q3E830	75 aa		0.5	□□□□□ -2.33
NSE3	YDR288W	KSH1	Q8TGJ3	72 aa		0.5	□□□□□ -2.33
NSE3	YDR288W	APC1	P53886	1748 aa		0.5	□□□□□ -2.33
NSE3	YDR288W	SIN3	P22579	1536 aa		0.49	□□□□□ -2.33
NSE3	YDR288W	FPR2	P32472	135 aa		0.49	□□□□□ -2.33
NSE3	YDR288W	NHP2	P32495	156 aa	Predicted RBP	0.49	□□□□□ -2.33
NSE3	YDR288W	YHL005C	P38752	130 aa		0.49	□□□□□ -2.33
NSE3	YDR288W	MPC2	P38857	129 aa		0.49	□□□□□ -2.33
NSE3	YDR288W	AIM19	P40502	157 aa		0.49	□□□□□ -2.33
NSE3	YDR288W	ICY1	Q04329	127 aa		0.49	□□□□□ -2.33
NSE3	YDR288W	RRT15	Q3E811	62 aa		0.49	□□□□□ -2.33
NSE3	YDR288W	YNR034W-A	Q3E841	98 aa		0.49	□□□□□ -2.33
NSE3	YDR288W	HKR1	P41809	1802 aa		0.49	□□□□□ -2.33
NSE3	YDR288W	TY2B-F	P0CX63	1770 aa		0.49	□□□□□ -2.33
NSE3	YDR288W	TY2B-GR2	P0CX64	1770 aa		0.49	□□□□□ -2.33
NSE3	YDR288W	TY2B-C	P25384	1770 aa		0.49	□□□□□ -2.33
NSE3	YDR288W	PDR10	P51533	1564 aa		0.49	□□□□□ -2.33
NSE3	YDR288W	MDN1	Q12019	4910 aa	Known RBP	0.48	□□□□□ -2.33
NSE3	YDR288W	YJR107C-A	P0CT86	78 aa		0.48	□□□□□ -2.33
NSE3	YDR288W	PDX3	P38075	228 aa	Known RBP	0.48	□□□□□ -2.33
NSE3	YDR288W	YBR292C	P38357	123 aa		0.48	□□□□□ -2.33
NSE3	YDR288W	BSC4	P53841	131 aa		0.48	□□□□□ -2.33
NSE3	YDR288W	YOR105W	Q08504	108 aa		0.48	□□□□□ -2.33
NSE3	YDR288W	SCP1	Q08873	200 aa		0.48	□□□□□ -2.33
NSE3	YDR288W	GDB1	Q06625	1536 aa		0.48	□□□□□ -2.33
NSE3	YDR288W	BPH1	P25356	2167 aa		0.47	□□□□□ -2.33
NSE3	YDR288W	SSN2	P38931	1420 aa		0.47	□□□□□ -2.33
NSE3	YDR288W	MEC1	P38111	2368 aa		0.47	□□□□□ -2.33
NSE3	YDR288W	CCW14	O13547	238 aa		0.47	□□□□□ -2.33
NSE3	YDR288W	YLR255C	O13574	117 aa		0.47	□□□□□ -2.33
NSE3	YDR288W	RPA12	P32529	125 aa	Known RBP	0.47	□□□□□ -2.33
NSE3	YDR288W	ATX1	P38636	73 aa		0.47	□□□□□ -2.33
NSE3	YDR288W	CWP2	P43497	92 aa		0.47	□□□□□ -2.33
NSE3	YDR288W	PAU23	Q07987	124 aa		0.47	□□□□□ -2.33
NSE3	YDR288W	PAU17	Q12370	124 aa		0.47	□□□□□ -2.33
NSE3	YDR288W	Q0032	Q9ZZX7	96 aa		0.47	□□□□□ -2.33
NSE3	YDR288W	TY2B-B	Q12491	1770 aa		0.47	□□□□□ -2.33
NSE3	YDR288W	TY1B-NL2	Q99337	1749 aa	Known RBP	0.47	□□□□□ -2.33
NSE3	YDR288W	CSF1	Q12150	2958 aa		0.46	□□□□□ -2.34
NSE3	YDR288W	BPT1	P14772	1559 aa		0.46	□□□□□ -2.34
NSE3	YDR288W	LSM2	P38203	95 aa	Known RBP	0.46	□□□□□ -2.34
NSE3	YDR288W	RPL38	P49167	78 aa	Known RBP	0.46	□□□□□ -2.34
NSE3	YDR288W	SGF11	Q03067	99 aa		0.46	□□□□□ -2.34
NSE3	YDR288W	YDR042C	Q03205	200 aa		0.46	□□□□□ -2.34
NSE3	YDR288W	COX19	Q3E731	98 aa		0.46	□□□□□ -2.34
NSE3	YDR288W	YIL134C-A	Q45U18	67 aa		0.46	□□□□□ -2.34
NSE3	YDR288W	TRA1	P38811	3744 aa		0.46	□□□□□ -2.34
NSE3	YDR288W	LTE1	P07866	1435 aa		0.46	□□□□□ -2.34
NSE3	YDR288W	RPS11A	P0CX47	156 aa	Known RBP	0.45	□□□□□ -2.34
NSE3	YDR288W	RPS11B	P0CX48	156 aa	Known RBP	0.45	□□□□□ -2.34
NSE3	YDR288W	COX7	P10174	60 aa		0.45	□□□□□ -2.34
NSE3	YDR288W	TOM6	P33448	61 aa		0.45	□□□□□ -2.34
NSE3	YDR288W	YNL198C	P40166	100 aa		0.45	□□□□□ -2.34
NSE3	YDR288W	RPC10	P40422	70 aa		0.45	□□□□□ -2.34
NSE3	YDR288W	ATP18	P81450	59 aa		0.45	□□□□□ -2.34
NSE3	YDR288W	YBR201C-A	Q2V2Q3	67 aa		0.45	□□□□□ -2.34
NSE3	YDR288W	SDH6	Q3E785	79 aa		0.45	□□□□□ -2.34
NSE3	YDR288W	YNL042W-B	Q3E7Z2	85 aa		0.45	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms