RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W SVP26P38869 228 aa6.77□□□□□ -1.33
SED1YDR077W RTC6O14464 93 aa6.76□□□□□ -1.33
SED1YDR077W RPC10P40422 70 aa6.76□□□□□ -1.33
SED1YDR077W RPR2P40571 144 aa6.76□□□□□ -1.33
SED1YDR077W TMA7Q3E764 64 aaKnown RBP6.76□□□□□ -1.33
SED1YDR077W DIF1O13577 133 aa6.75□□□□□ -1.33
SED1YDR077W POP7P38291 140 aa6.75□□□□□ -1.33
SED1YDR077W YLL066W-BQ8TGJ7 56 aa6.75□□□□□ -1.33
SED1YDR077W MID2P36027 376 aa6.74□□□□□ -1.33
SED1YDR077W CWP2P43497 92 aa6.74□□□□□ -1.33
SED1YDR077W YDR115WQ04598 105 aa6.74□□□□□ -1.33
SED1YDR077W YAL065CO13511 128 aa6.73□□□□□ -1.33
SED1YDR077W YNL198CP40166 100 aa6.73□□□□□ -1.33
SED1YDR077W RPL11AP0C0W9 174 aaKnown RBP6.72□□□□□ -1.33
SED1YDR077W CDC43P18898 376 aa6.72□□□□□ -1.33
SED1YDR077W YAL064WP39711 94 aa6.72□□□□□ -1.33
SED1YDR077W LSM6Q06406 86 aaKnown RBP6.72□□□□□ -1.33
SED1YDR077W YDL241WQ07738 123 aa6.72□□□□□ -1.33
SED1YDR077W RPL11BQ3E757 174 aaPredicted RBP6.72□□□□□ -1.33
SED1YDR077W NHP2P32495 156 aaPredicted RBP6.7□□□□□ -1.34
SED1YDR077W YIA6P40556 373 aa6.7□□□□□ -1.34
SED1YDR077W YLL006W-AQ3E814 58 aa6.7□□□□□ -1.34
SED1YDR077W ANB1P19211 157 aa6.69□□□□□ -1.34
SED1YDR077W YHR130CP38834 111 aa6.69□□□□□ -1.34
SED1YDR077W UBC11P52492 156 aa6.69□□□□□ -1.34
SED1YDR077W YBL081WP38180 368 aaKnown RBP6.68□□□□□ -1.34
SED1YDR077W ABF2Q02486 183 aa6.68□□□□□ -1.34
SED1YDR077W RRT15Q3E811 62 aa6.68□□□□□ -1.34
SED1YDR077W YAR023CD6VPM8 179 aa6.67□□□□□ -1.34
SED1YDR077W HYP2P23301 157 aaKnown RBP6.67□□□□□ -1.34
SED1YDR077W YOR020W-AQ3E824 90 aa6.67□□□□□ -1.34
SED1YDR077W RGM1Q00453 211 aa6.66□□□□□ -1.34
SED1YDR077W AQY2P0CD90 149 aa6.65□□□□□ -1.34
SED1YDR077W CPR1P14832 162 aaKnown RBP6.64□□□□□ -1.35
SED1YDR077W ARO2P28777 376 aaKnown RBP6.64□□□□□ -1.35
SED1YDR077W EOS1P53938 366 aa6.64□□□□□ -1.35
SED1YDR077W SMD1Q02260 146 aaPredicted RBP6.64□□□□□ -1.35
SED1YDR077W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
SED1YDR077W MVB12P42939 101 aa6.63□□□□□ -1.35
SED1YDR077W COX10P21592 462 aa6.62□□□□□ -1.35
SED1YDR077W SNA2P56508 79 aa6.62□□□□□ -1.35
SED1YDR077W HPA2Q06592 156 aa6.62□□□□□ -1.35
SED1YDR077W RPL29P05747 59 aaPredicted RBP6.61□□□□□ -1.35
SED1YDR077W YBL039W-BP0C268 59 aa6.61□□□□□ -1.35
SED1YDR077W YFL019CP43576 117 aa6.61□□□□□ -1.35
SED1YDR077W HUR1P45820 110 aa6.59□□□□□ -1.35
SED1YDR077W KNH1P50112 268 aa6.59□□□□□ -1.35
SED1YDR077W DUT1P33317 147 aa6.58□□□□□ -1.36
SED1YDR077W YPL229WQ99395 206 aa6.58□□□□□ -1.36
SED1YDR077W MRPL24P36525 258 aaPredicted RBP6.57□□□□□ -1.36
SED1YDR077W YDR029WQ12111 104 aa6.57□□□□□ -1.36
SED1YDR077W IRC21Q04772 201 aa6.56□□□□□ -1.36
SED1YDR077W AIM19P40502 157 aa6.55□□□□□ -1.36
SED1YDR077W YGL041C-BQ3E750 60 aa6.55□□□□□ -1.36
SED1YDR077W RPL26AP05743 127 aaKnown RBP6.54□□□□□ -1.36
SED1YDR077W RPL26BP53221 127 aaKnown RBP6.54□□□□□ -1.36
SED1YDR077W ICY1Q04329 127 aa6.54□□□□□ -1.36
SED1YDR077W YPR195CQ06594 109 aa6.54□□□□□ -1.36
SED1YDR077W YOR034C-AQ3E735 80 aa6.54□□□□□ -1.36
SED1YDR077W Q0032Q9ZZX7 96 aa6.54□□□□□ -1.36
SED1YDR077W STF1P01098 86 aa6.53□□□□□ -1.36
SED1YDR077W UBC4P15731 148 aa6.52□□□□□ -1.37
SED1YDR077W YLR236CA0A023PZG4 107 aa6.51□□□□□ -1.37
SED1YDR077W ECM12O13529 151 aa6.51□□□□□ -1.37
SED1YDR077W YDR034C-AP0C289 58 aa6.51□□□□□ -1.37
SED1YDR077W YNL162W-AQ3E7A8 72 aa6.51□□□□□ -1.37
SED1YDR077W MRP10O75012 95 aa6.5□□□□□ -1.37
SED1YDR077W IGD1P43598 195 aa6.5□□□□□ -1.37
SED1YDR077W SMP1P38128 452 aa6.49□□□□□ -1.37
SED1YDR077W DSE2P38844 325 aa6.48□□□□□ -1.37
SED1YDR077W YPL257WQ08974 193 aa6.48□□□□□ -1.37
SED1YDR077W PEX22P39718 180 aa6.47□□□□□ -1.37
SED1YDR077W RPA12P32529 125 aaKnown RBP6.45□□□□□ -1.38
SED1YDR077W MPC3P53311 146 aa6.45□□□□□ -1.38
SED1YDR077W YLR307C-AQ3E825 87 aa6.45□□□□□ -1.38
SED1YDR077W MSA2P36157 363 aa6.44□□□□□ -1.38
SED1YDR077W SOH1P38633 127 aa6.44□□□□□ -1.38
SED1YDR077W ATX1P38636 73 aa6.43□□□□□ -1.38
SED1YDR077W OST2P46964 130 aa6.43□□□□□ -1.38
SED1YDR077W YBR230W-AQ3E762 66 aa6.43□□□□□ -1.38
SED1YDR077W YNL042W-BQ3E7Z2 85 aa6.43□□□□□ -1.38
SED1YDR077W YJL127C-BQ3E828 52 aa6.43□□□□□ -1.38
SED1YDR077W FYV5P25585 152 aa6.42□□□□□ -1.38
SED1YDR077W SLO1Q3E784 85 aa6.41□□□□□ -1.38
SED1YDR077W YJR107C-AP0CT86 78 aa6.4□□□□□ -1.38
SED1YDR077W YCR085WP25650 117 aa6.39□□□□□ -1.39
SED1YDR077W YGL193CP53097 103 aa6.39□□□□□ -1.39
SED1YDR077W LCL2Q08045 131 aa6.38□□□□□ -1.39
SED1YDR077W YER039C-AP0CD97 72 aa6.37□□□□□ -1.39
SED1YDR077W SFT1P43682 97 aa6.37□□□□□ -1.39
SED1YDR077W TSC3Q3E790 80 aa6.37□□□□□ -1.39
SED1YDR077W RUB1Q03919 77 aa6.36□□□□□ -1.39
SED1YDR077W PBI2P0CT04 75 aaKnown RBP6.35□□□□□ -1.39
SED1YDR077W SPT4P32914 102 aaPredicted RBP6.35□□□□□ -1.39
SED1YDR077W ATP18P81450 59 aa6.35□□□□□ -1.39
SED1YDR077W INO4P13902 151 aa6.34□□□□□ -1.39
SED1YDR077W DDR2P89113 61 aa6.34□□□□□ -1.39
SED1YDR077W BET1P22804 142 aa6.33□□□□□ -1.4
SED1YDR077W YLR156WP0CE96 114 aa6.32□□□□□ -1.4
SED1YDR077W YLR159WP0CE97 114 aa6.32□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 26 ms