RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	YBR200W-A	Q3E755	54 aa		3.06	□□□□□ -1.92
VMA1	YDL185W	TDA8	Q6B2U8	126 aa		3.06	□□□□□ -1.92
VMA1	YDL185W	URA2	P07259	2214 aa	Known RBP	3.06	□□□□□ -1.92
VMA1	YDL185W	BET1	P22804	142 aa		3.06	□□□□□ -1.92
VMA1	YDL185W	YHR022C	P38763	256 aa		3.06	□□□□□ -1.92
VMA1	YDL185W	ARC15	P40518	154 aa	RIP-Chip data	3.06	□□□□□ -1.92	not detected
VMA1	YDL185W	YLR281C	Q05863	155 aa		3.06	□□□□□ -1.92
VMA1	YDL185W	YLR285C-A	Q3E771	56 aa		3.06	□□□□□ -1.92
VMA1	YDL185W	WWM1	P43582	211 aa	Known RBP	3.05	□□□□□ -1.92
VMA1	YDL185W	SFT1	P43682	97 aa		3.05	□□□□□ -1.92
VMA1	YDL185W	RGM1	Q00453	211 aa		3.05	□□□□□ -1.92
VMA1	YDL185W	PBP4	Q07362	185 aa	Known RBP	3.05	□□□□□ -1.92
VMA1	YDL185W	YDL009C	Q12210	107 aa		3.05	□□□□□ -1.92
VMA1	YDL185W	YLR156W	P0CE96	114 aa		3.04	□□□□□ -1.92
VMA1	YDL185W	YLR159W	P0CE97	114 aa		3.04	□□□□□ -1.92
VMA1	YDL185W	YLR161W	P0CE98	114 aa		3.04	□□□□□ -1.92
VMA1	YDL185W	MRPL38	P35996	138 aa	Predicted RBP	3.04	□□□□□ -1.92
VMA1	YDL185W	EDC1	P53080	175 aa	Predicted RBP	3.04	□□□□□ -1.92
VMA1	YDL185W	COX17	Q12287	69 aa		3.04	□□□□□ -1.92
VMA1	YDL185W	YFL019C	P43576	117 aa		3.04	□□□□□ -1.92
VMA1	YDL185W	YGR219W	P53307	113 aa		3.04	□□□□□ -1.92
VMA1	YDL185W	IRC21	Q04772	201 aa		3.04	□□□□□ -1.92
VMA1	YDL185W	QCR8	P08525	94 aa		3.03	□□□□□ -1.92
VMA1	YDL185W	GAT4	P40569	121 aa		3.03	□□□□□ -1.92
VMA1	YDL185W	TIM10	P87108	93 aa		3.03	□□□□□ -1.92
VMA1	YDL185W	UTH1	P36135	365 aa		3.03	□□□□□ -1.92
VMA1	YDL185W	ERI1	P62651	68 aa	Known RBP	3.03	□□□□□ -1.92
VMA1	YDL185W	RRT15	Q3E811	62 aa		3.03	□□□□□ -1.92
VMA1	YDL185W	YLR236C	A0A023PZG4	107 aa		3.02	□□□□□ -1.93
VMA1	YDL185W	YEL008W	P40001	126 aa		3.02	□□□□□ -1.93
VMA1	YDL185W	YGL088W	P53151	121 aa		3.02	□□□□□ -1.93
VMA1	YDL185W	SRL1	Q08673	210 aa		3.02	□□□□□ -1.93
VMA1	YDL185W	POR2	P40478	281 aa		3.02	□□□□□ -1.93
VMA1	YDL185W	RPS23A	P0CX29	145 aa	Known RBP	3.02	□□□□□ -1.93
VMA1	YDL185W	RPS23B	P0CX30	145 aa		3.02	□□□□□ -1.93
VMA1	YDL185W	SPS100	P13130	326 aa		3.02	□□□□□ -1.93
VMA1	YDL185W	AIM4	P38305	123 aa	Predicted RBP	3.02	□□□□□ -1.93
VMA1	YDL185W	ATP20	Q12233	115 aa		3.02	□□□□□ -1.93
VMA1	YDL185W	YNL277W-A	Q3E7Z0	62 aa		3.02	□□□□□ -1.93
VMA1	YDL185W	YAR029W	P39549	74 aa		3.01	□□□□□ -1.93
VMA1	YDL185W	YOR268C	Q08734	132 aa		3.01	□□□□□ -1.93
VMA1	YDL185W	YJR107C-A	P0CT86	78 aa		3.01	□□□□□ -1.93
VMA1	YDL185W	CCW12	Q12127	133 aa		3.01	□□□□□ -1.93
VMA1	YDL185W	RSM19	P53733	91 aa	Predicted RBP	3	□□□□□ -1.93
VMA1	YDL185W	KEG1	P43614	200 aa		3	□□□□□ -1.93
VMA1	YDL185W	YKL183C-A	Q3E765	70 aa		3	□□□□□ -1.93
VMA1	YDL185W	YAL065C	O13511	128 aa		2.99	□□□□□ -1.93
VMA1	YDL185W	YHL037C	P38733	133 aa		2.99	□□□□□ -1.93
VMA1	YDL185W	YFR035C	P43608	114 aa		2.99	□□□□□ -1.93
VMA1	YDL185W	YNL046W	P53956	172 aa		2.99	□□□□□ -1.93
VMA1	YDL185W	SED1	Q01589	338 aa		2.99	□□□□□ -1.93
VMA1	YDL185W	ICY1	Q04329	127 aa		2.99	□□□□□ -1.93
VMA1	YDL185W	SPG4	Q04438	115 aa		2.99	□□□□□ -1.93
VMA1	YDL185W	NOP10	Q6Q547	58 aa	Predicted RBP	2.99	□□□□□ -1.93
VMA1	YDL185W	YPR013C	Q12145	317 aa		2.98	□□□□□ -1.93
VMA1	YDL185W	YMR295C	Q03559	197 aa		2.98	□□□□□ -1.93
VMA1	YDL185W	YGR121W-A	Q3E816	71 aa		2.98	□□□□□ -1.93
VMA1	YDL185W	YLR162W	Q06235	118 aa		2.98	□□□□□ -1.93
VMA1	YDL185W	COX14	P39103	70 aa		2.97	□□□□□ -1.93
VMA1	YDL185W	RPR2	P40571	144 aa		2.97	□□□□□ -1.93
VMA1	YDL185W	MPC3	P53311	146 aa		2.97	□□□□□ -1.93
VMA1	YDL185W	YOR020W-A	Q3E824	90 aa		2.97	□□□□□ -1.93
VMA1	YDL185W	YBR126W-A	Q8TGU7	68 aa		2.97	□□□□□ -1.93
VMA1	YDL185W	ATP18	P81450	59 aa		2.97	□□□□□ -1.93
VMA1	YDL185W	MIC10	Q96VH5	97 aa		2.97	□□□□□ -1.93
VMA1	YDL185W	YFR009W-A	P0C5M9	85 aa		2.97	□□□□□ -1.93
VMA1	YDL185W	YBR219C	P38317	127 aa		2.97	□□□□□ -1.93
VMA1	YDL185W	YOL166W-A	Q8TGJ1	51 aa		2.97	□□□□□ -1.93
VMA1	YDL185W	FMP27	Q06179	2628 aa		2.96	□□□□□ -1.93
VMA1	YDL185W	HFA1	P32874	2273 aa		2.96	□□□□□ -1.94
VMA1	YDL185W	ICS3	P47034	131 aa		2.96	□□□□□ -1.94
VMA1	YDL185W	YCL048W-A	Q2V2Q2	79 aa		2.96	□□□□□ -1.94
VMA1	YDL185W	YER135C	P40082	130 aa		2.96	□□□□□ -1.94
VMA1	YDL185W	YLL006W-A	Q3E814	58 aa		2.96	□□□□□ -1.94
VMA1	YDL185W	HHF1	P02309	103 aa	Known RBP	2.95	□□□□□ -1.94
VMA1	YDL185W	SPT4	P32914	102 aa	Predicted RBP	2.95	□□□□□ -1.94
VMA1	YDL185W	YNL146C-A	Q3E7Z1	64 aa		2.95	□□□□□ -1.94
VMA1	YDL185W	RSM18	P40033	138 aa		2.95	□□□□□ -1.94
VMA1	YDL185W	YOR011W-A	Q3E807	68 aa		2.95	□□□□□ -1.94
VMA1	YDL185W	RPL26A	P05743	127 aa	Known RBP	2.94	□□□□□ -1.94
VMA1	YDL185W	RPL38	P49167	78 aa	Known RBP	2.94	□□□□□ -1.94
VMA1	YDL185W	RPL26B	P53221	127 aa	Known RBP	2.94	□□□□□ -1.94
VMA1	YDL185W	YDR182W-A	Q3E796	67 aa		2.94	□□□□□ -1.94
VMA1	YDL185W	YDR274C	P87283	123 aa		2.94	□□□□□ -1.94
VMA1	YDL185W	YOR314W	Q12506	109 aa		2.94	□□□□□ -1.94
VMA1	YDL185W	PEX22	P39718	180 aa		2.93	□□□□□ -1.94
VMA1	YDL185W	VAM10	Q08474	114 aa		2.93	□□□□□ -1.94
VMA1	YDL185W	YOR381W-A	Q3E804	55 aa		2.93	□□□□□ -1.94
VMA1	YDL185W	YGR035W-A	Q45U48	73 aa		2.93	□□□□□ -1.94
VMA1	YDL185W	RPL36B	O14455	100 aa	Known RBP	2.93	□□□□□ -1.94
VMA1	YDL185W	RPL36A	P05745	100 aa	Predicted RBP	2.93	□□□□□ -1.94
VMA1	YDL185W	MMS2	P53152	137 aa		2.93	□□□□□ -1.94
VMA1	YDL185W	YPS5	P53057	165 aa		2.93	□□□□□ -1.94
VMA1	YDL185W	CRC1	Q12289	327 aa		2.93	□□□□□ -1.94
VMA1	YDL185W	YHL005C	P38752	130 aa		2.92	□□□□□ -1.94
VMA1	YDL185W	RPB9	P27999	122 aa		2.91	□□□□□ -1.94
VMA1	YDL185W	SMD1	Q02260	146 aa	Predicted RBP	2.91	□□□□□ -1.94
VMA1	YDL185W	YOL014W	Q08110	124 aa		2.91	□□□□□ -1.94
VMA1	YDL185W	YMR244W	Q04018	355 aa		2.91	□□□□□ -1.94
VMA1	YDL185W	RPS30A	P0CX33	63 aa	Known RBP	2.9	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms