RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W FYV5P25585 152 aa0.98□□□□□ -2.25
CDC36YDL165W ERG2P32352 222 aa0.98□□□□□ -2.25
CDC36YDL165W YHR022CP38763 256 aa0.98□□□□□ -2.25
CDC36YDL165W TVP23P38962 199 aa0.98□□□□□ -2.25
CDC36YDL165W VTC1P40046 129 aaRIP-Chip data0.98□□□□□ -2.25not detected
CDC36YDL165W YGR269WP40326 108 aa0.98□□□□□ -2.25
CDC36YDL165W RPL26BP53221 127 aaKnown RBP0.98□□□□□ -2.25
CDC36YDL165W ERI1P62651 68 aaKnown RBP0.98□□□□□ -2.25
CDC36YDL165W YMR007WQ03675 126 aa0.98□□□□□ -2.25
CDC36YDL165W IRC21Q04772 201 aa0.98□□□□□ -2.25
CDC36YDL165W YLR194CQ05777 254 aa0.98□□□□□ -2.25
CDC36YDL165W YLR162WQ06235 118 aa0.98□□□□□ -2.25
CDC36YDL165W IRC19Q07843 230 aa0.98□□□□□ -2.25
CDC36YDL165W VPS68Q12016 184 aa0.98□□□□□ -2.25
CDC36YDL165W ATP20Q12233 115 aa0.98□□□□□ -2.25
CDC36YDL165W TIM22Q12328 207 aa0.98□□□□□ -2.25
CDC36YDL165W YDR182W-AQ3E796 67 aa0.98□□□□□ -2.25
CDC36YDL165W CYR1P08678 2026 aaKnown RBP0.98□□□□□ -2.25
CDC36YDL165W FLO9P39712 1322 aa0.97□□□□□ -2.25
CDC36YDL165W RPL36BO14455 100 aaKnown RBP0.97□□□□□ -2.25
CDC36YDL165W RPL36AP05745 100 aaPredicted RBP0.97□□□□□ -2.25
CDC36YDL165W YLR156WP0CE96 114 aa0.97□□□□□ -2.25
CDC36YDL165W YLR159WP0CE97 114 aa0.97□□□□□ -2.25
CDC36YDL165W YLR161WP0CE98 114 aa0.97□□□□□ -2.25
CDC36YDL165W ATP15P21306 62 aa0.97□□□□□ -2.25
CDC36YDL165W YHL037CP38733 133 aa0.97□□□□□ -2.25
CDC36YDL165W COX14P39103 70 aa0.97□□□□□ -2.25
CDC36YDL165W YNR077CP53758 84 aa0.97□□□□□ -2.25
CDC36YDL165W SNA2P56508 79 aa0.97□□□□□ -2.25
CDC36YDL165W SED1Q01589 338 aa0.97□□□□□ -2.25
CDC36YDL165W YMR122CQ03879 124 aa0.97□□□□□ -2.25
CDC36YDL165W SOM1Q05676 74 aa0.97□□□□□ -2.25
CDC36YDL165W YPR011CQ12251 326 aa0.97□□□□□ -2.25
CDC36YDL165W YOR192C-CQ3E736 78 aa0.97□□□□□ -2.25
CDC36YDL165W YDR246W-AQ3E763 66 aa0.97□□□□□ -2.25
CDC36YDL165W HUB1Q6Q546 73 aa0.97□□□□□ -2.25
CDC36YDL165W FKS3Q04952 1785 aa0.96□□□□□ -2.26
CDC36YDL165W BPH1P25356 2167 aa0.96□□□□□ -2.26
CDC36YDL165W CCW14O13547 238 aa0.96□□□□□ -2.26
CDC36YDL165W RPS23AP0CX29 145 aaKnown RBP0.96□□□□□ -2.26
CDC36YDL165W RPS23BP0CX30 145 aa0.96□□□□□ -2.26
CDC36YDL165W SRX1P36077 127 aa0.96□□□□□ -2.26
CDC36YDL165W YBL071CP38185 102 aa0.96□□□□□ -2.26
CDC36YDL165W ARC15P40518 154 aaRIP-Chip data0.96□□□□□ -2.26not detected
CDC36YDL165W YGL149WP53116 101 aa0.96□□□□□ -2.26
CDC36YDL165W RGM1Q00453 211 aa0.96□□□□□ -2.26
CDC36YDL165W YPR153WQ06537 140 aa0.96□□□□□ -2.26
CDC36YDL165W FYV12Q08559 129 aa0.96□□□□□ -2.26
CDC36YDL165W YCR095W-AQ3E787 52 aa0.96□□□□□ -2.26
CDC36YDL165W YGR121W-AQ3E816 71 aa0.96□□□□□ -2.26
CDC36YDL165W HUG1Q6Q5K6 68 aa0.96□□□□□ -2.26
CDC36YDL165W YBT1P32386 1661 aa0.96□□□□□ -2.26
CDC36YDL165W ECM29P38737 1868 aa0.96□□□□□ -2.26
CDC36YDL165W BRR2P32639 2163 aaKnown RBP0.96□□□□□ -2.26
CDC36YDL165W APC1P53886 1748 aa0.95□□□□□ -2.26
CDC36YDL165W NUP192P47054 1683 aa0.95□□□□□ -2.26
CDC36YDL165W YDL022C-AP0C5L6 82 aa0.95□□□□□ -2.26
CDC36YDL165W RPS30AP0CX33 63 aaKnown RBP0.95□□□□□ -2.26
CDC36YDL165W RPS30BP0CX34 63 aaKnown RBP0.95□□□□□ -2.26
CDC36YDL165W HMRA2P0CY13 119 aa0.95□□□□□ -2.26
CDC36YDL165W HSP150P32478 413 aa0.95□□□□□ -2.26
CDC36YDL165W YEL067CP39978 195 aa0.95□□□□□ -2.26
CDC36YDL165W YIR020CP40575 100 aa0.95□□□□□ -2.26
CDC36YDL165W SPC1P46965 94 aa0.95□□□□□ -2.26
CDC36YDL165W TOS6P48560 102 aa0.95□□□□□ -2.26
CDC36YDL165W DAD4P69851 72 aa0.95□□□□□ -2.26
CDC36YDL165W MGR2Q02889 113 aa0.95□□□□□ -2.26
CDC36YDL165W YMR244WQ04018 355 aa0.95□□□□□ -2.26
CDC36YDL165W YPL278CQ08990 100 aa0.95□□□□□ -2.26
CDC36YDL165W YGL258W-AQ3E740 77 aa0.95□□□□□ -2.26
CDC36YDL165W YPR108W-AQ3E7B3 70 aa0.95□□□□□ -2.26
CDC36YDL165W YOR008C-AQ3E7B9 74 aa0.95□□□□□ -2.26
CDC36YDL165W YGR035W-AQ45U48 73 aa0.95□□□□□ -2.26
CDC36YDL165W NOP10Q6Q547 58 aaPredicted RBP0.95□□□□□ -2.26
CDC36YDL165W RIM15P43565 1770 aa0.95□□□□□ -2.26
CDC36YDL165W CDC39P25655 2108 aaKnown RBP0.95□□□□□ -2.26
CDC36YDL165W FKS1P38631 1876 aaKnown RBP0.95□□□□□ -2.26
CDC36YDL165W UBR2Q07963 1872 aa0.95□□□□□ -2.26
CDC36YDL165W QCR8P08525 94 aa0.94□□□□□ -2.26
CDC36YDL165W YJR107C-AP0CT86 78 aa0.94□□□□□ -2.26
CDC36YDL165W YCR001WP25347 104 aa0.94□□□□□ -2.26
CDC36YDL165W MRPL38P35996 138 aaPredicted RBP0.94□□□□□ -2.26
CDC36YDL165W YKR032WP36127 104 aa0.94□□□□□ -2.26
CDC36YDL165W SHU1P38751 150 aa0.94□□□□□ -2.26
CDC36YDL165W COX23P38824 151 aa0.94□□□□□ -2.26
CDC36YDL165W HUA1P40325 198 aa0.94□□□□□ -2.26
CDC36YDL165W POR2P40478 281 aa0.94□□□□□ -2.26
CDC36YDL165W TOM7P53507 60 aa0.94□□□□□ -2.26
CDC36YDL165W BSC4P53841 131 aa0.94□□□□□ -2.26
CDC36YDL165W FIT2Q08906 153 aa0.94□□□□□ -2.26
CDC36YDL165W YDR010CQ12426 110 aa0.94□□□□□ -2.26
CDC36YDL165W YOL166W-AQ8TGJ1 51 aa0.94□□□□□ -2.26
CDC36YDL165W HKR1P41809 1802 aa0.94□□□□□ -2.26
CDC36YDL165W GSC2P40989 1895 aa0.93□□□□□ -2.26
CDC36YDL165W YJL197C-AP0C5P0 93 aa0.93□□□□□ -2.26
CDC36YDL165W RPL38P49167 78 aaKnown RBP0.93□□□□□ -2.26
CDC36YDL165W EDC1P53080 175 aaPredicted RBP0.93□□□□□ -2.26
CDC36YDL165W MRX7P53869 86 aa0.93□□□□□ -2.26
CDC36YDL165W API2Q04413 109 aa0.93□□□□□ -2.26
CDC36YDL165W YMR321CQ04898 105 aa0.93□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms