RNA–Protein interactions for RNA: YCR073C

SSK22, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeastyeast

Gene SSK22, Length 3,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK22YCR073C YMR244WQ04018 355 aa4.17□□□□□ -1.74
SSK22YCR073C PBI2P0CT04 75 aaKnown RBP4.16□□□□□ -1.74
SSK22YCR073C RPL15AP05748 204 aaKnown RBP4.16□□□□□ -1.74
SSK22YCR073C GCN1P33892 2672 aaKnown RBP4.16□□□□□ -1.74
SSK22YCR073C RPS28BP0C0X0 67 aaKnown RBP4.15□□□□□ -1.74
SSK22YCR073C MET32Q12041 191 aa4.15□□□□□ -1.74
SSK22YCR073C RPS28AQ3E7X9 67 aaPredicted RBP4.15□□□□□ -1.74
SSK22YCR073C QCR8P08525 94 aa4.15□□□□□ -1.75
SSK22YCR073C YER135CP40082 130 aa4.15□□□□□ -1.75
SSK22YCR073C MRPS8Q03799 155 aa4.15□□□□□ -1.75
SSK22YCR073C SRL1Q08673 210 aa4.15□□□□□ -1.75
SSK22YCR073C RPR2P40571 144 aa4.13□□□□□ -1.75
SSK22YCR073C ECM12O13529 151 aa4.12□□□□□ -1.75
SSK22YCR073C HAL1Q01766 294 aa4.12□□□□□ -1.75
SSK22YCR073C HUR1P45820 110 aa4.12□□□□□ -1.75
SSK22YCR073C YOL166W-AQ8TGJ1 51 aa4.12□□□□□ -1.75
SSK22YCR073C YFR009W-AP0C5M9 85 aa4.12□□□□□ -1.75
SSK22YCR073C YIR020CP40575 100 aa4.12□□□□□ -1.75
SSK22YCR073C YCR050CP25630 102 aa4.11□□□□□ -1.75
SSK22YCR073C YDR029WQ12111 104 aa4.11□□□□□ -1.75
SSK22YCR073C YER187WP40102 141 aa4.1□□□□□ -1.75
SSK22YCR073C YIL059CP40520 121 aa4.1□□□□□ -1.75
SSK22YCR073C YGL088WP53151 121 aa4.1□□□□□ -1.75
SSK22YCR073C SPS100P13130 326 aa4.1□□□□□ -1.75
SSK22YCR073C YSY6P38374 65 aa4.1□□□□□ -1.75
SSK22YCR073C PBA1Q05778 276 aa4.1□□□□□ -1.75
SSK22YCR073C UBC4P15731 148 aa4.09□□□□□ -1.75
SSK22YCR073C RDS3Q06835 107 aaPredicted RBP4.09□□□□□ -1.75
SSK22YCR073C COF1Q03048 143 aaKnown RBP4.09□□□□□ -1.75
SSK22YCR073C YLR156WP0CE96 114 aa4.09□□□□□ -1.76
SSK22YCR073C YLR159WP0CE97 114 aa4.09□□□□□ -1.76
SSK22YCR073C YLR161WP0CE98 114 aa4.09□□□□□ -1.76
SSK22YCR073C IRC21Q04772 201 aa4.09□□□□□ -1.76
SSK22YCR073C KSH1Q8TGJ3 72 aa4.09□□□□□ -1.76
SSK22YCR073C VAM10Q08474 114 aa4.08□□□□□ -1.76
SSK22YCR073C YOR011W-AQ3E807 68 aa4.08□□□□□ -1.76
SSK22YCR073C HHF1P02309 103 aaKnown RBP4.08□□□□□ -1.76
SSK22YCR073C YLL006W-AQ3E814 58 aa4.08□□□□□ -1.76
SSK22YCR073C YGR121W-AQ3E816 71 aa4.08□□□□□ -1.76
SSK22YCR073C SBH1P52870 82 aa4.07□□□□□ -1.76
SSK22YCR073C MPC3P53311 146 aa4.07□□□□□ -1.76
SSK22YCR073C YOR020W-AQ3E824 90 aa4.07□□□□□ -1.76
SSK22YCR073C ERI1P62651 68 aaKnown RBP4.07□□□□□ -1.76
SSK22YCR073C RPL29P05747 59 aaPredicted RBP4.06□□□□□ -1.76
SSK22YCR073C YGR164WP53291 111 aa4.06□□□□□ -1.76
SSK22YCR073C YNL162W-AQ3E7A8 72 aa4.06□□□□□ -1.76
SSK22YCR073C RAD6P06104 172 aa4.05□□□□□ -1.76
SSK22YCR073C ATP18P81450 59 aa4.05□□□□□ -1.76
SSK22YCR073C SPG4Q04438 115 aa4.05□□□□□ -1.76
SSK22YCR073C YOL014WQ08110 124 aa4.05□□□□□ -1.76
SSK22YCR073C MLF3P32047 452 aa4.05□□□□□ -1.76
SSK22YCR073C HOR7Q05827 59 aa4.05□□□□□ -1.76
SSK22YCR073C TMC1Q08422 150 aaPredicted RBP4.05□□□□□ -1.76
SSK22YCR073C YLR412C-AQ3E742 68 aa4.05□□□□□ -1.76
SSK22YCR073C YJR107C-AP0CT86 78 aa4.04□□□□□ -1.76
SSK22YCR073C YBR209WP38311 105 aa4.04□□□□□ -1.76
SSK22YCR073C YLR307C-AQ3E825 87 aa4.04□□□□□ -1.76
SSK22YCR073C KEG1P43614 200 aa4.04□□□□□ -1.76
SSK22YCR073C ICY1Q04329 127 aa4.04□□□□□ -1.76
SSK22YCR073C YLR162WQ06235 118 aa4.04□□□□□ -1.76
SSK22YCR073C YPS5P53057 165 aa4.03□□□□□ -1.76
SSK22YCR073C YBL081WP38180 368 aaKnown RBP4.02□□□□□ -1.77
SSK22YCR073C YAR029WP39549 74 aa4.01□□□□□ -1.77
SSK22YCR073C NOP10Q6Q547 58 aaPredicted RBP4.01□□□□□ -1.77
SSK22YCR073C RPS11AP0CX47 156 aaKnown RBP4.01□□□□□ -1.77
SSK22YCR073C RPS11BP0CX48 156 aaKnown RBP4.01□□□□□ -1.77
SSK22YCR073C YLR285C-AQ3E771 56 aa4.01□□□□□ -1.77
SSK22YCR073C Q0297Q9ZZV8 51 aa4.01□□□□□ -1.77
SSK22YCR073C YBR121C-AP0C5L4 52 aa4.01□□□□□ -1.77
SSK22YCR073C YGL260WP53056 76 aa4.01□□□□□ -1.77
SSK22YCR073C EMC6Q12431 108 aa4.01□□□□□ -1.77
SSK22YCR073C YPL278CQ08990 100 aa4□□□□□ -1.77
SSK22YCR073C IGD1P43598 195 aa4□□□□□ -1.77
SSK22YCR073C ATP20Q12233 115 aa4□□□□□ -1.77
SSK22YCR073C TOS8P53147 276 aa4□□□□□ -1.77
SSK22YCR073C YMR122W-AQ3E842 84 aa4□□□□□ -1.77
SSK22YCR073C ERG28P40030 148 aa3.99□□□□□ -1.77
SSK22YCR073C YGR035W-AQ45U48 73 aa3.99□□□□□ -1.77
SSK22YCR073C RSM19P53733 91 aaPredicted RBP3.99□□□□□ -1.77
SSK22YCR073C YLR281CQ05863 155 aa3.98□□□□□ -1.77
SSK22YCR073C YER145C-AA0A023PYF4 145 aa3.97□□□□□ -1.77
SSK22YCR073C AIR2Q12476 344 aaKnown RBP3.97□□□□□ -1.77
SSK22YCR073C YDR182W-AQ3E796 67 aa3.97□□□□□ -1.77
SSK22YCR073C URA2P07259 2214 aaKnown RBP3.96□□□□□ -1.77
SSK22YCR073C YDL241WQ07738 123 aa3.96□□□□□ -1.78
SSK22YCR073C RRT15Q3E811 62 aa3.96□□□□□ -1.78
SSK22YCR073C COX17Q12287 69 aa3.95□□□□□ -1.78
SSK22YCR073C YLL066W-BQ8TGJ7 56 aa3.95□□□□□ -1.78
SSK22YCR073C RSM18P40033 138 aa3.95□□□□□ -1.78
SSK22YCR073C RPL11BQ3E757 174 aaPredicted RBP3.95□□□□□ -1.78
SSK22YCR073C AIM4P38305 123 aaPredicted RBP3.94□□□□□ -1.78
SSK22YCR073C YDR115WQ04598 105 aa3.94□□□□□ -1.78
SSK22YCR073C YOR268CQ08734 132 aa3.94□□□□□ -1.78
SSK22YCR073C CRC1Q12289 327 aa3.94□□□□□ -1.78
SSK22YCR073C PMP3P87284 55 aa3.94□□□□□ -1.78
SSK22YCR073C YFL019CP43576 117 aa3.94□□□□□ -1.78
SSK22YCR073C RPL11AP0C0W9 174 aaKnown RBP3.93□□□□□ -1.78
SSK22YCR073C YJL197C-AP0C5P0 93 aa3.93□□□□□ -1.78
SSK22YCR073C KTI11Q3E840 82 aa3.93□□□□□ -1.78
SSK22YCR073C RPC10P40422 70 aa3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms