RNA–Protein interactions for RNA: YCL014W

BUD3, Transcript of Protein involved in bud-site selection, yeast

Gene BUD3, Length 4,911 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BUD3	YCL014W	YIL046W-A	Q3E7Z4	54 aa		0.64	□□□□□ -2.31
BUD3	YCL014W	UBI4	P0CG63	381 aa	Known RBP	0.64	□□□□□ -2.31
BUD3	YCL014W	SNU13	P39990	126 aa	Known RBP	0.64	□□□□□ -2.31
BUD3	YCL014W	SPI1	P40092	148 aa		0.64	□□□□□ -2.31
BUD3	YCL014W	YJR146W	P47174	117 aa		0.64	□□□□□ -2.31
BUD3	YCL014W	ACC1	Q00955	2233 aa	Known RBP	0.64	□□□□□ -2.31
BUD3	YCL014W	COX5A	P00424	153 aa		0.64	□□□□□ -2.31
BUD3	YCL014W	LSM1	P47017	172 aa	Known RBP	0.64	□□□□□ -2.31
BUD3	YCL014W	MRPS17	Q03246	237 aa	Predicted RBP	0.64	□□□□□ -2.31
BUD3	YCL014W	IGO2	Q9P305	131 aa		0.64	□□□□□ -2.31
BUD3	YCL014W	YCR001W	P25347	104 aa		0.63	□□□□□ -2.31
BUD3	YCL014W	MRPL11	P36521	249 aa	Predicted RBP	0.63	□□□□□ -2.31
BUD3	YCL014W	ATP17	Q06405	101 aa		0.63	□□□□□ -2.31
BUD3	YCL014W	PAA1	Q12447	191 aa	Known RBP	0.63	□□□□□ -2.31
BUD3	YCL014W	MRPL28	P36527	147 aa		0.63	□□□□□ -2.31
BUD3	YCL014W	YBR219C	P38317	127 aa		0.63	□□□□□ -2.31
BUD3	YCL014W	YEL073C	P39974	107 aa		0.63	□□□□□ -2.31
BUD3	YCL014W	MIC26	P50087	233 aa		0.63	□□□□□ -2.31
BUD3	YCL014W	YBR072C-A	Q3E794	53 aa		0.63	□□□□□ -2.31
BUD3	YCL014W	SPO13	P23624	291 aa		0.63	□□□□□ -2.31
BUD3	YCL014W	CTR2	P38865	189 aa		0.63	□□□□□ -2.31
BUD3	YCL014W	YFL041W-A	Q3E817	63 aa		0.63	□□□□□ -2.31
BUD3	YCL014W	SMB1	P40018	196 aa	Known RBP	0.63	□□□□□ -2.31
BUD3	YCL014W	PHS1	P40857	217 aa		0.63	□□□□□ -2.31
BUD3	YCL014W	SED1	Q01589	338 aa		0.63	□□□□□ -2.31
BUD3	YCL014W	YMR122C	Q03879	124 aa		0.63	□□□□□ -2.31
BUD3	YCL014W	YDR115W	Q04598	105 aa		0.63	□□□□□ -2.31
BUD3	YCL014W	NKP2	Q06162	153 aa		0.63	□□□□□ -2.31
BUD3	YCL014W	YUH1	P35127	236 aa		0.62	□□□□□ -2.31
BUD3	YCL014W	SMD2	Q06217	110 aa	Known RBP	0.62	□□□□□ -2.31
BUD3	YCL014W	RPS25B	P0C0T4	108 aa	Known RBP	0.62	□□□□□ -2.31
BUD3	YCL014W	GLT1	Q12680	2145 aa	Known RBP	0.62	□□□□□ -2.31
BUD3	YCL014W	RPS25A	Q3E792	108 aa	Predicted RBP	0.62	□□□□□ -2.31
BUD3	YCL014W	YMR316C-A	I2HB70	103 aa		0.62	□□□□□ -2.31
BUD3	YCL014W	LSM2	P38203	95 aa	Known RBP	0.62	□□□□□ -2.31
BUD3	YCL014W	SNU23	Q12368	194 aa	Predicted RBP	0.62	□□□□□ -2.31
BUD3	YCL014W	OST5	Q92316	86 aa		0.62	□□□□□ -2.31
BUD3	YCL014W	Q0142	Q9ZZW4	58 aa		0.62	□□□□□ -2.31
BUD3	YCL014W	YHR212W-A	P0CX91	67 aa		0.62	□□□□□ -2.31
BUD3	YCL014W	CCH1	P50077	2039 aa		0.62	□□□□□ -2.31
BUD3	YCL014W	FRQ1	Q06389	190 aa		0.62	□□□□□ -2.31
BUD3	YCL014W	YBL071C	P38185	102 aa		0.61	□□□□□ -2.31
BUD3	YCL014W	MET31	Q03081	177 aa		0.61	□□□□□ -2.31
BUD3	YCL014W	GIM5	Q04493	163 aa		0.61	□□□□□ -2.31
BUD3	YCL014W	YPR153W	Q06537	140 aa		0.61	□□□□□ -2.31
BUD3	YCL014W	YHR130C	P38834	111 aa		0.61	□□□□□ -2.31
BUD3	YCL014W	YHR173C	P38864	112 aa		0.61	□□□□□ -2.31
BUD3	YCL014W	MPC1	P53157	130 aa	Known RBP	0.61	□□□□□ -2.31
BUD3	YCL014W	HHT1	P61830	136 aa		0.61	□□□□□ -2.31
BUD3	YCL014W	ECM19	Q06011	112 aa		0.61	□□□□□ -2.31
BUD3	YCL014W	YBR230W-A	Q3E762	66 aa		0.61	□□□□□ -2.31
BUD3	YCL014W	HTB2	P02294	131 aa		0.61	□□□□□ -2.31
BUD3	YCL014W	PAU1	P0CE88	120 aa		0.61	□□□□□ -2.31
BUD3	YCL014W	PAU14	P0CE89	120 aa		0.61	□□□□□ -2.31
BUD3	YCL014W	PAU6	P0CE90	120 aa		0.61	□□□□□ -2.31
BUD3	YCL014W	PAU18	P0CE91	120 aa		0.61	□□□□□ -2.31
BUD3	YCL014W	PAU8	P0CE92	120 aa		0.61	□□□□□ -2.31
BUD3	YCL014W	PAU11	P0CE93	120 aa		0.61	□□□□□ -2.31
BUD3	YCL014W	PAU13	P38725	120 aa		0.61	□□□□□ -2.31
BUD3	YCL014W	YHR125W	P38831	101 aa		0.61	□□□□□ -2.31
BUD3	YCL014W	PAU4	P53427	120 aa		0.61	□□□□□ -2.31
BUD3	YCL014W	PAU10	Q03050	120 aa		0.61	□□□□□ -2.31
BUD3	YCL014W	ICY1	Q04329	127 aa		0.61	□□□□□ -2.31
BUD3	YCL014W	PAU20	Q08322	120 aa		0.61	□□□□□ -2.31
BUD3	YCL014W	PAU9	Q3E770	120 aa		0.61	□□□□□ -2.31
BUD3	YCL014W	COX8	P04039	78 aa		0.61	□□□□□ -2.31
BUD3	YCL014W	YDR210W	Q03482	75 aa		0.61	□□□□□ -2.31
BUD3	YCL014W	QCR8	P08525	94 aa		0.6	□□□□□ -2.31
BUD3	YCL014W	YKR045C	P36138	183 aa		0.6	□□□□□ -2.31
BUD3	YCL014W	YNL190W	P53872	204 aa		0.6	□□□□□ -2.31
BUD3	YCL014W	YCL001W-A	P87012	153 aa		0.6	□□□□□ -2.31
BUD3	YCL014W	APS2	Q00381	147 aa		0.6	□□□□□ -2.31
BUD3	YCL014W	YDR102C	Q03864	110 aa		0.6	□□□□□ -2.31
BUD3	YCL014W	YMR122W-A	Q3E842	84 aa		0.6	□□□□□ -2.31
BUD3	YCL014W	CKS1	P20486	150 aa	Known RBP	0.6	□□□□□ -2.31
BUD3	YCL014W	YBR032W	P38223	100 aa		0.6	□□□□□ -2.31
BUD3	YCL014W	HUB1	Q6Q546	73 aa		0.6	□□□□□ -2.31
BUD3	YCL014W	RPL29	P05747	59 aa	Predicted RBP	0.6	□□□□□ -2.31
BUD3	YCL014W	PAU21	P0CE86	164 aa		0.6	□□□□□ -2.31
BUD3	YCL014W	PAU22	P0CE87	164 aa		0.6	□□□□□ -2.31
BUD3	YCL014W	ERD2	P18414	219 aa		0.6	□□□□□ -2.31
BUD3	YCL014W	RPB11	P38902	120 aa		0.6	□□□□□ -2.31
BUD3	YCL014W	GCN1	P33892	2672 aa	Known RBP	0.6	□□□□□ -2.31
BUD3	YCL014W	YBL044W	P38194	122 aa		0.6	□□□□□ -2.31
BUD3	YCL014W	RSM18	P40033	138 aa		0.6	□□□□□ -2.31
BUD3	YCL014W	ATG16	Q03818	150 aa		0.6	□□□□□ -2.31
BUD3	YCL014W	BET1	P22804	142 aa		0.59	□□□□□ -2.31
BUD3	YCL014W	FPR2	P32472	135 aa		0.59	□□□□□ -2.31
BUD3	YCL014W	CYB5	P40312	120 aa		0.59	□□□□□ -2.31
BUD3	YCL014W	SDH6	Q3E785	79 aa		0.59	□□□□□ -2.31
BUD3	YCL014W	YPR014C	Q6B0W2	109 aa		0.59	□□□□□ -2.31
BUD3	YCL014W	EDC1	P53080	175 aa	Predicted RBP	0.59	□□□□□ -2.31
BUD3	YCL014W	FIT3	Q08907	204 aa		0.59	□□□□□ -2.31
BUD3	YCL014W	UBR1	P19812	1950 aa		0.59	□□□□□ -2.31
BUD3	YCL014W	MRP49	P32388	137 aa		0.59	□□□□□ -2.32
BUD3	YCL014W	GPI14	P47088	403 aa	Known RBP	0.59	□□□□□ -2.32
BUD3	YCL014W	YNL184C	P53876	108 aa		0.59	□□□□□ -2.32
BUD3	YCL014W	YCL048W-A	Q2V2Q2	79 aa		0.59	□□□□□ -2.32
BUD3	YCL014W	YBR201C-A	Q2V2Q3	67 aa		0.59	□□□□□ -2.32
BUD3	YCL014W	FAB1	P34756	2278 aa		0.59	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 93 ms