RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	IMP2	P46972	177 aa		2.66	□□□□□ -1.98
SMP1	YBR182C	VPS55	P47111	140 aa		2.66	□□□□□ -1.98
SMP1	YBR182C	SEC7	P11075	2009 aa	Known RBP	2.66	□□□□□ -1.98
SMP1	YBR182C	CHC1	P22137	1653 aa	Known RBP	2.65	□□□□□ -1.98
SMP1	YBR182C	MYO1	P08964	1928 aa		2.65	□□□□□ -1.98
SMP1	YBR182C	RPS22A	P0C0W1	130 aa	Known RBP	2.65	□□□□□ -1.98
SMP1	YBR182C	YCR085W	P25650	117 aa		2.65	□□□□□ -1.98
SMP1	YBR182C	RPA12	P32529	125 aa	Known RBP	2.65	□□□□□ -1.98
SMP1	YBR182C	DNF2	Q12675	1612 aa		2.65	□□□□□ -1.99
SMP1	YBR182C	ICS3	P47034	131 aa		2.64	□□□□□ -1.99
SMP1	YBR182C	CCW12	Q12127	133 aa		2.64	□□□□□ -1.99
SMP1	YBR182C	YCR095W-A	Q3E787	52 aa		2.64	□□□□□ -1.99
SMP1	YBR182C	IML1	P47170	1584 aa		2.64	□□□□□ -1.99
SMP1	YBR182C	PDR5	P33302	1511 aa	Known RBP	2.64	□□□□□ -1.99
SMP1	YBR182C	YAR064W	P39563	99 aa		2.63	□□□□□ -1.99
SMP1	YBR182C	YOL118C	Q08259	102 aa		2.63	□□□□□ -1.99
SMP1	YBR182C	YGL041C-B	Q3E750	60 aa		2.63	□□□□□ -1.99
SMP1	YBR182C	YOR093C	Q12275	1648 aa		2.63	□□□□□ -1.99
SMP1	YBR182C	YRF1-2	P40105	1681 aa		2.63	□□□□□ -1.99
SMP1	YBR182C	NUP188	P52593	1655 aa	Known RBP	2.63	□□□□□ -1.99
SMP1	YBR182C	POC4	Q12245	148 aa	Predicted RBP	2.62	□□□□□ -1.99
SMP1	YBR182C	VMR1	P38735	1592 aa		2.62	□□□□□ -1.99
SMP1	YBR182C	CCW14	O13547	238 aa		2.61	□□□□□ -1.99
SMP1	YBR182C	YOR072W	Q08486	104 aa		2.61	□□□□□ -1.99
SMP1	YBR182C	MIC27	P50945	234 aa		2.61	□□□□□ -1.99
SMP1	YBR182C	TY1B-NL2	Q99337	1749 aa	Known RBP	2.6	□□□□□ -1.99
SMP1	YBR182C	YBR013C	P38215	129 aa		2.6	□□□□□ -1.99
SMP1	YBR182C	SNA2	P56508	79 aa		2.6	□□□□□ -1.99
SMP1	YBR182C	HAP1	P0CE41	1502 aa		2.59	□□□□□ -1.99
SMP1	YBR182C	YCR001W	P25347	104 aa		2.59	□□□□□ -2
SMP1	YBR182C	MHF2	Q3E829	80 aa		2.59	□□□□□ -2
SMP1	YBR182C	DNF3	Q12674	1656 aa		2.58	□□□□□ -2
SMP1	YBR182C	BCK1	Q01389	1478 aa		2.58	□□□□□ -2
SMP1	YBR182C	MRPL38	P35996	138 aa	Predicted RBP	2.58	□□□□□ -2
SMP1	YBR182C	MRPS12	P53732	153 aa		2.58	□□□□□ -2
SMP1	YBR182C	LCL2	Q08045	131 aa		2.58	□□□□□ -2
SMP1	YBR182C	YGR240C-A	Q3E786	66 aa		2.58	□□□□□ -2
SMP1	YBR182C	RPS22B	Q3E7Y3	130 aa	Known RBP	2.58	□□□□□ -2
SMP1	YBR182C	YHR213W-A	Q8TGT4	77 aa		2.58	□□□□□ -2
SMP1	YBR182C	TY4B-J	P47024	1803 aa		2.57	□□□□□ -2
SMP1	YBR182C	TOM6	P33448	61 aa		2.57	□□□□□ -2
SMP1	YBR182C	YIL102C	P40488	101 aa		2.56	□□□□□ -2
SMP1	YBR182C	YDR210W	Q03482	75 aa		2.56	□□□□□ -2
SMP1	YBR182C	LAA1	P39526	2014 aa		2.55	□□□□□ -2
SMP1	YBR182C	MRPL31	P14063	131 aa	Predicted RBP	2.54	□□□□□ -2
SMP1	YBR182C	MRP17	P28778	131 aa		2.54	□□□□□ -2
SMP1	YBR182C	NHP2	P32495	156 aa	Predicted RBP	2.54	□□□□□ -2
SMP1	YBR182C	YBL071C	P38185	102 aa		2.54	□□□□□ -2
SMP1	YBR182C	SPC1	P46965	94 aa		2.54	□□□□□ -2
SMP1	YBR182C	MGR2	Q02889	113 aa		2.54	□□□□□ -2
SMP1	YBR182C	NUP192	P47054	1683 aa		2.53	□□□□□ -2
SMP1	YBR182C	YOL013W-A	P0C272	63 aa	Predicted RBP	2.53	□□□□□ -2
SMP1	YBR182C	LSM2	P38203	95 aa	Known RBP	2.53	□□□□□ -2
SMP1	YBR182C	YPL038W-A	Q3E7B4	63 aa		2.53	□□□□□ -2
SMP1	YBR182C	PAU6	P0CE90	120 aa		2.52	□□□□□ -2.01
SMP1	YBR182C	PAU18	P0CE91	120 aa		2.52	□□□□□ -2.01
SMP1	YBR182C	MRX7	P53869	86 aa		2.52	□□□□□ -2.01
SMP1	YBR182C	YMR007W	Q03675	126 aa		2.52	□□□□□ -2.01
SMP1	YBR182C	YOR343C	Q12484	108 aa		2.52	□□□□□ -2.01
SMP1	YBR182C	COX12	Q01519	83 aa		2.51	□□□□□ -2.01
SMP1	YBR182C	SLH1	P53327	1967 aa	Known RBP	2.5	□□□□□ -2.01
SMP1	YBR182C	USO1	P25386	1790 aa		2.49	□□□□□ -2.01
SMP1	YBR182C	AIM19	P40502	157 aa		2.49	□□□□□ -2.01
SMP1	YBR182C	YDR119W-A	Q2V2P9	66 aa		2.49	□□□□□ -2.01
SMP1	YBR182C	MLP1	Q02455	1875 aa	Known RBP	2.48	□□□□□ -2.01
SMP1	YBR182C	YHR214C-D	P0CX93	97 aa		2.48	□□□□□ -2.01
SMP1	YBR182C	MVB12	P42939	101 aa		2.48	□□□□□ -2.01
SMP1	YBR182C	YDR381C-A	Q3E6R5	114 aa		2.48	□□□□□ -2.01
SMP1	YBR182C	YNR034W-A	Q3E841	98 aa		2.47	□□□□□ -2.01
SMP1	YBR182C	HFA1	P32874	2273 aa		2.46	□□□□□ -2.02
SMP1	YBR182C	BEM2	P39960	2167 aa	Known RBP	2.46	□□□□□ -2.02
SMP1	YBR182C	FAS2	P19097	1887 aa	Known RBP	2.46	□□□□□ -2.02
SMP1	YBR182C	PAI3	P01094	68 aa		2.46	□□□□□ -2.02
SMP1	YBR182C	YPR145C-A	Q2V2P0	78 aa		2.46	□□□□□ -2.02
SMP1	YBR182C	HUG1	Q6Q5K6	68 aa		2.46	□□□□□ -2.02
SMP1	YBR182C	RPS11A	P0CX47	156 aa	Known RBP	2.45	□□□□□ -2.02
SMP1	YBR182C	RPS11B	P0CX48	156 aa	Known RBP	2.45	□□□□□ -2.02
SMP1	YBR182C	BSC4	P53841	131 aa		2.45	□□□□□ -2.02
SMP1	YBR182C	YLR255C	O13574	117 aa		2.44	□□□□□ -2.02
SMP1	YBR182C	PAU1	P0CE88	120 aa		2.44	□□□□□ -2.02
SMP1	YBR182C	PAU14	P0CE89	120 aa		2.44	□□□□□ -2.02
SMP1	YBR182C	PAU8	P0CE92	120 aa		2.44	□□□□□ -2.02
SMP1	YBR182C	PAU11	P0CE93	120 aa		2.44	□□□□□ -2.02
SMP1	YBR182C	PAU13	P38725	120 aa		2.44	□□□□□ -2.02
SMP1	YBR182C	PAU4	P53427	120 aa		2.44	□□□□□ -2.02
SMP1	YBR182C	PAU10	Q03050	120 aa		2.44	□□□□□ -2.02
SMP1	YBR182C	PAU9	Q3E770	120 aa		2.44	□□□□□ -2.02
SMP1	YBR182C	SNF2	P22082	1703 aa		2.43	□□□□□ -2.02
SMP1	YBR182C	LCL1	Q02786	101 aa		2.43	□□□□□ -2.02
SMP1	YBR182C	HUA1	P40325	198 aa		2.42	□□□□□ -2.02
SMP1	YBR182C	YOR314W	Q12506	109 aa		2.42	□□□□□ -2.02
SMP1	YBR182C	RRP5	Q05022	1729 aa	Known RBP	2.41	□□□□□ -2.02
SMP1	YBR182C	MPC2	P38857	129 aa		2.41	□□□□□ -2.02
SMP1	YBR182C	YIL086C	P40503	102 aa		2.41	□□□□□ -2.02
SMP1	YBR182C	PAU20	Q08322	120 aa		2.41	□□□□□ -2.02
SMP1	YBR182C	YKL065W-A	Q2V2P2	73 aa		2.41	□□□□□ -2.02
SMP1	YBR182C	TY4B-H	P0C2J7	1802 aa		2.4	□□□□□ -2.02
SMP1	YBR182C	YER188C-A	P0C0V2	99 aa		2.4	□□□□□ -2.02
SMP1	YBR182C	COX19	Q3E731	98 aa		2.4	□□□□□ -2.02
SMP1	YBR182C	YBR292C	P38357	123 aa		2.39	□□□□□ -2.03

Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms