RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W YPT53P36019 220 aa1.53□□□□□ -2.16
NUP170YBL079W YKL070WP36087 169 aa1.53□□□□□ -2.16
NUP170YBL079W YIL024CP40543 189 aa1.53□□□□□ -2.16
NUP170YBL079W COA6Q3E846 104 aa1.53□□□□□ -2.16
NUP170YBL079W GLC8P41818 229 aa1.53□□□□□ -2.16
NUP170YBL079W YGL230CP53074 147 aa1.53□□□□□ -2.16
NUP170YBL079W PAU23Q07987 124 aa1.53□□□□□ -2.16
NUP170YBL079W CKS1P20486 150 aaKnown RBP1.53□□□□□ -2.16
NUP170YBL079W YCR043CP25361 127 aa1.53□□□□□ -2.16
NUP170YBL079W YKL044WP36092 106 aa1.52□□□□□ -2.17
NUP170YBL079W YHL005CP38752 130 aa1.52□□□□□ -2.17
NUP170YBL079W YHR130CP38834 111 aa1.52□□□□□ -2.17
NUP170YBL079W COX14P39103 70 aa1.52□□□□□ -2.17
NUP170YBL079W YPR195CQ06594 109 aa1.52□□□□□ -2.17
NUP170YBL079W CMC2Q3E7A4 109 aa1.52□□□□□ -2.17
NUP170YBL079W YER134CP40081 178 aa1.52□□□□□ -2.17
NUP170YBL079W OST2P46964 130 aa1.52□□□□□ -2.17
NUP170YBL079W ATP5P09457 212 aa1.52□□□□□ -2.17
NUP170YBL079W IGO2Q9P305 131 aa1.52□□□□□ -2.17
NUP170YBL079W YGL010WP25338 174 aa1.52□□□□□ -2.17
NUP170YBL079W DDR2P89113 61 aa1.52□□□□□ -2.17
NUP170YBL079W YEL008WP40001 126 aa1.51□□□□□ -2.17
NUP170YBL079W TDA2P40045 126 aa1.51□□□□□ -2.17
NUP170YBL079W MRPL11P36521 249 aaPredicted RBP1.51□□□□□ -2.17
NUP170YBL079W TIM11P81449 96 aaPredicted RBP1.51□□□□□ -2.17
NUP170YBL079W VMA9Q3E7B6 73 aa1.51□□□□□ -2.17
NUP170YBL079W ISD11Q6Q560 94 aa1.51□□□□□ -2.17
NUP170YBL079W NRG1Q03125 231 aa1.51□□□□□ -2.17
NUP170YBL079W YCR024C-BQ3E7Z8 88 aa1.5□□□□□ -2.17
NUP170YBL079W YNR034W-AQ3E841 98 aa1.5□□□□□ -2.17
NUP170YBL079W YOL097W-AQ3E7Y9 61 aa1.5□□□□□ -2.17
NUP170YBL079W YOL085CQ99345 113 aa1.5□□□□□ -2.17
NUP170YBL079W HHO1P53551 258 aa1.5□□□□□ -2.17
NUP170YBL079W SHH4Q06236 168 aa1.5□□□□□ -2.17
NUP170YBL079W RPL23AP0CX41 137 aaKnown RBP1.5□□□□□ -2.17
NUP170YBL079W RPL23BP0CX42 137 aaKnown RBP1.5□□□□□ -2.17
NUP170YBL079W FYV12Q08559 129 aa1.5□□□□□ -2.17
NUP170YBL079W YPR014CQ6B0W2 109 aa1.5□□□□□ -2.17
NUP170YBL079W YAL065CO13511 128 aa1.49□□□□□ -2.17
NUP170YBL079W FUN14P18411 198 aa1.49□□□□□ -2.17
NUP170YBL079W GSP2P32836 220 aaKnown RBP1.49□□□□□ -2.17
NUP170YBL079W HIT1P46973 164 aa1.49□□□□□ -2.17
NUP170YBL079W YNL122CP53921 115 aaPredicted RBP1.49□□□□□ -2.17
NUP170YBL079W ICY1Q04329 127 aa1.49□□□□□ -2.17
NUP170YBL079W YGL194C-AQ2V2P6 80 aa1.49□□□□□ -2.17
NUP170YBL079W RRT15Q3E811 62 aa1.49□□□□□ -2.17
NUP170YBL079W FYV4P38783 130 aaPredicted RBP1.49□□□□□ -2.17
NUP170YBL079W POP7P38291 140 aa1.49□□□□□ -2.17
NUP170YBL079W SNN1P48232 102 aa1.49□□□□□ -2.17
NUP170YBL079W TPT1Q12272 230 aaKnown RBP1.49□□□□□ -2.17
NUP170YBL079W YLL006W-AQ3E814 58 aa1.49□□□□□ -2.17
NUP170YBL079W YMR295CQ03559 197 aa1.48□□□□□ -2.17
NUP170YBL079W YOR072WQ08486 104 aa1.48□□□□□ -2.17
NUP170YBL079W FZF1P32805 299 aa1.48□□□□□ -2.17
NUP170YBL079W SRP14P38985 146 aa1.48□□□□□ -2.17
NUP170YBL079W YIA6P40556 373 aa1.48□□□□□ -2.17
NUP170YBL079W GTT1P40582 234 aa1.48□□□□□ -2.17
NUP170YBL079W YPL257WQ08974 193 aa1.48□□□□□ -2.17
NUP170YBL079W SCM4P32564 187 aa1.48□□□□□ -2.17
NUP170YBL079W YBL081WP38180 368 aaKnown RBP1.48□□□□□ -2.17
NUP170YBL079W YER085CP40058 173 aa1.48□□□□□ -2.17
NUP170YBL079W ATG8P38182 117 aaRIP-Chip data1.48□□□□□ -2.17not detected
NUP170YBL079W YEL067CP39978 195 aa1.48□□□□□ -2.17
NUP170YBL079W YML054C-AQ3E809 52 aa1.48□□□□□ -2.17
NUP170YBL079W YJL127C-BQ3E828 52 aa1.48□□□□□ -2.17
NUP170YBL079W FYV5P25585 152 aa1.47□□□□□ -2.17
NUP170YBL079W SEC11P15367 167 aa1.47□□□□□ -2.17
NUP170YBL079W PRE1P22141 198 aaKnown RBP1.47□□□□□ -2.17
NUP170YBL079W YHR139C-AO13536 103 aa1.47□□□□□ -2.17
NUP170YBL079W GSP1P32835 219 aaKnown RBP1.47□□□□□ -2.17
NUP170YBL079W RPL18AP0CX49 186 aaKnown RBP1.46□□□□□ -2.18
NUP170YBL079W RPL18BP0CX50 186 aaKnown RBP1.46□□□□□ -2.18
NUP170YBL079W RPS29BP41058 56 aaKnown RBP1.46□□□□□ -2.18
NUP170YBL079W YEL045CP32616 141 aa1.46□□□□□ -2.18
NUP170YBL079W EOS1P53938 366 aa1.46□□□□□ -2.18
NUP170YBL079W YPL261CQ08976 102 aa1.46□□□□□ -2.18
NUP170YBL079W RPS29AP41057 56 aaKnown RBP1.45□□□□□ -2.18
NUP170YBL079W YBR230W-AQ3E762 66 aa1.45□□□□□ -2.18
NUP170YBL079W BET1P22804 142 aa1.45□□□□□ -2.18
NUP170YBL079W YPL073CP40323 161 aa1.45□□□□□ -2.18
NUP170YBL079W VMA21P41806 77 aa1.45□□□□□ -2.18
NUP170YBL079W AIM11P87275 137 aa1.45□□□□□ -2.18
NUP170YBL079W ATP14Q12349 124 aa1.45□□□□□ -2.18
NUP170YBL079W RAD6P06104 172 aa1.44□□□□□ -2.18
NUP170YBL079W YFR057WP43625 151 aa1.44□□□□□ -2.18
NUP170YBL079W YGL088WP53151 121 aa1.44□□□□□ -2.18
NUP170YBL079W RPL36BO14455 100 aaKnown RBP1.44□□□□□ -2.18
NUP170YBL079W KRE1P17260 313 aa1.44□□□□□ -2.18
NUP170YBL079W YGR025WP53216 100 aa1.43□□□□□ -2.18
NUP170YBL079W YMR103CQ04436 120 aa1.43□□□□□ -2.18
NUP170YBL079W ATP15P21306 62 aa1.43□□□□□ -2.18
NUP170YBL079W MSA2P36157 363 aa1.43□□□□□ -2.18
NUP170YBL079W POP3P53833 195 aaPredicted RBP1.43□□□□□ -2.18
NUP170YBL079W BNS1P50084 137 aa1.43□□□□□ -2.18
NUP170YBL079W FMP16Q12497 93 aa1.43□□□□□ -2.18
NUP170YBL079W CYT2Q00873 224 aa1.42□□□□□ -2.18
NUP170YBL079W IRC21Q04772 201 aa1.42□□□□□ -2.18
NUP170YBL079W MSL1P40567 111 aaPredicted RBP1.42□□□□□ -2.18
NUP170YBL079W CUE4Q04201 117 aaPredicted RBP1.42□□□□□ -2.18
NUP170YBL079W YDL157CQ12082 118 aa1.42□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 39.4 ms