RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 PAQR9Q6ZVX9 377 aa26.76■■□□□ 1.87
VEGFA-232ENST00000640653 CRYBG2Q8N1P7 616 aa26.76■■□□□ 1.87
VEGFA-232ENST00000640653 PDZD8Q8NEN9 1154 aa26.76■■□□□ 1.87
VEGFA-232ENST00000640653 ATP2A3Q93084 1043 aa26.76■■□□□ 1.87
VEGFA-232ENST00000640653 EXOC4Q96A65 974 aa26.76■■□□□ 1.87
VEGFA-232ENST00000640653 CYP3A43Q9HB55 503 aa26.76■■□□□ 1.87
VEGFA-232ENST00000640653 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.76■■□□□ 1.877e-7■■■■□ 19.4
VEGFA-232ENST00000640653 PCDHA5Q9Y5H7 936 aa26.76■■□□□ 1.87
VEGFA-232ENST00000640653 ZFHX2Q9C0A1 2572 aaPredicted RBP26.76■■□□□ 1.87
VEGFA-232ENST00000640653 VPS13AQ96RL7 3174 aa26.76■■□□□ 1.87
VEGFA-232ENST00000640653 STX10O60499 249 aa26.75■■□□□ 1.87
VEGFA-232ENST00000640653 AP1G2O75843 785 aa26.75■■□□□ 1.87
VEGFA-232ENST00000640653 GRSF1Q12849 480 aaKnown RBP eCLIP26.75■■□□□ 1.87
VEGFA-232ENST00000640653 GAS6Q14393 721 aa26.75■■□□□ 1.87
VEGFA-232ENST00000640653 WDR44Q5JSH3 913 aa26.75■■□□□ 1.87
VEGFA-232ENST00000640653 FUKQ8N0W3 1084 aa26.75■■□□□ 1.87
VEGFA-232ENST00000640653 SPATA20Q8TB22 786 aa26.75■■□□□ 1.87
VEGFA-232ENST00000640653 OVCA2Q8WZ82 227 aa26.75■■□□□ 1.87
VEGFA-232ENST00000640653 FBXO32Q969P5 355 aa26.75■■□□□ 1.87
VEGFA-232ENST00000640653 KCNK16Q96T55 309 aa26.75■■□□□ 1.87
VEGFA-232ENST00000640653 DNAI2Q9GZS0 605 aa26.75■■□□□ 1.87
VEGFA-232ENST00000640653 NIF3L1Q9GZT8 377 aa26.75■■□□□ 1.87
VEGFA-232ENST00000640653 KRT82Q9NSB4 513 aa26.75■■□□□ 1.87
VEGFA-232ENST00000640653 OTOL1A6NHN0 477 aaPredicted RBP26.74■■□□□ 1.87
VEGFA-232ENST00000640653 MCCD1P59942 119 aaPredicted RBP26.74■■□□□ 1.87
VEGFA-232ENST00000640653 SLC7A9P82251 487 aa26.74■■□□□ 1.87
VEGFA-232ENST00000640653 SATB1Q01826 763 aa26.74■■□□□ 1.87
VEGFA-232ENST00000640653 INCA1Q0VD86 236 aa26.74■■□□□ 1.87
VEGFA-232ENST00000640653 ORC1Q13415 861 aa26.74■■□□□ 1.87
VEGFA-232ENST00000640653 TMEM196Q5HYL7 178 aa26.74■■□□□ 1.87
VEGFA-232ENST00000640653 SLC2A14Q8TDB8 520 aa26.74■■□□□ 1.87
VEGFA-232ENST00000640653 EEF2KMTQ96G04 330 aa26.74■■□□□ 1.87
VEGFA-232ENST00000640653 ECT2Q9H8V3 914 aa26.74■■□□□ 1.87
VEGFA-232ENST00000640653 APOBEC3GQ9HC16 384 aaKnown RBP26.74■■□□□ 1.87
VEGFA-232ENST00000640653 COMMD8Q9NX08 183 aa26.74■■□□□ 1.87
VEGFA-232ENST00000640653 HMGXB4Q9UGU5 601 aa26.74■■□□□ 1.87
VEGFA-232ENST00000640653 WNT6Q9Y6F9 365 aa26.74■■□□□ 1.87
VEGFA-232ENST00000640653 ANAPC1Q9H1A4 1944 aa26.74■■□□□ 1.87
VEGFA-232ENST00000640653 FANCMQ8IYD8 2048 aa26.73■■□□□ 1.87
VEGFA-232ENST00000640653 TRDMT1O14717 391 aaKnown RBP26.73■■□□□ 1.87
VEGFA-232ENST00000640653 OAS1P00973 400 aaKnown RBP26.73■■□□□ 1.87
VEGFA-232ENST00000640653 TDGF1P13385 188 aa26.73■■□□□ 1.87
VEGFA-232ENST00000640653 CCDC130P13994 396 aa26.73■■□□□ 1.87
VEGFA-232ENST00000640653 MXI1P50539 228 aa26.73■■□□□ 1.87
VEGFA-232ENST00000640653 SLC5A3P53794 718 aa26.73■■□□□ 1.87
VEGFA-232ENST00000640653 NR1H3Q13133 447 aa26.73■■□□□ 1.87
VEGFA-232ENST00000640653 EML3Q32P44 896 aa26.73■■□□□ 1.87
VEGFA-232ENST00000640653 Q6ZS52 159 aa26.73■■□□□ 1.87
VEGFA-232ENST00000640653 ELOA2Q8IYF1 753 aaPredicted RBP26.73■■□□□ 1.87
VEGFA-232ENST00000640653 ERCC4Q92889 916 aaPredicted RBP26.73■■□□□ 1.87
VEGFA-232ENST00000640653 NT5C1AQ9BXI3 368 aa26.73■■□□□ 1.87
VEGFA-232ENST00000640653 LEFTY2O00292 366 aa26.72■■□□□ 1.87
VEGFA-232ENST00000640653 TNFRSF10BO14763 440 aa26.72■■□□□ 1.87
VEGFA-232ENST00000640653 SLC16A3O15427 465 aaKnown RBP26.72■■□□□ 1.87
VEGFA-232ENST00000640653 LILRB5O75023 590 aa26.72■■□□□ 1.87
VEGFA-232ENST00000640653 OLFM2O95897 454 aa26.72■■□□□ 1.87
VEGFA-232ENST00000640653 GJA4P35212 333 aa26.72■■□□□ 1.87
VEGFA-232ENST00000640653 FKBP3Q00688 224 aaKnown RBP26.72■■□□□ 1.87
VEGFA-232ENST00000640653 STIM1Q13586 685 aa26.72■■□□□ 1.87
VEGFA-232ENST00000640653 KIAA1958Q8N8K9 716 aa26.72■■□□□ 1.87
VEGFA-232ENST00000640653 RNF38Q9H0F5 515 aa26.72■■□□□ 1.87
VEGFA-232ENST00000640653 FAM49BQ9NUQ9 324 aa26.72■■□□□ 1.87
VEGFA-232ENST00000640653 CPQQ9Y646 472 aa26.72■■□□□ 1.87
VEGFA-232ENST00000640653 PAPSS2O95340 614 aaPredicted RBP26.71■■□□□ 1.87
VEGFA-232ENST00000640653 NFATC1O95644 943 aa26.71■■□□□ 1.87
VEGFA-232ENST00000640653 LRRC63Q05C16 580 aa26.71■■□□□ 1.87
VEGFA-232ENST00000640653 DDX42Q86XP3 938 aaKnown RBP eCLIP26.71■■□□□ 1.874e-7■■■□□ 19
VEGFA-232ENST00000640653 C12orf29Q8N999 325 aa26.71■■□□□ 1.87
VEGFA-232ENST00000640653 SUMF1Q8NBK3 374 aa26.71■■□□□ 1.87
VEGFA-232ENST00000640653 FBXL13Q8NEE6 735 aa26.71■■□□□ 1.87
VEGFA-232ENST00000640653 SCAMP5Q8TAC9 235 aa26.71■■□□□ 1.87
VEGFA-232ENST00000640653 CHFRQ96EP1 664 aa26.71■■□□□ 1.87
VEGFA-232ENST00000640653 FAXDC2Q96IV6 333 aa26.71■■□□□ 1.87
VEGFA-232ENST00000640653 SMOQ99835 787 aa26.71■■□□□ 1.87
VEGFA-232ENST00000640653 HINFPQ9BQA5 517 aa26.71■■□□□ 1.87
VEGFA-232ENST00000640653 CSNK1G1Q9HCP0 422 aa26.71■■□□□ 1.87
VEGFA-232ENST00000640653 IL37Q9NZH6 218 aa26.71■■□□□ 1.87
VEGFA-232ENST00000640653 FAM200BP0CF97 657 aa26.7■■□□□ 1.86
VEGFA-232ENST00000640653 CD58P19256 250 aa26.7■■□□□ 1.86
VEGFA-232ENST00000640653 DRD1P21728 446 aa26.7■■□□□ 1.86
VEGFA-232ENST00000640653 TCERG1LQ5VWI1 586 aa26.7■■□□□ 1.86
VEGFA-232ENST00000640653 ANKRD40Q6AI12 368 aa26.7■■□□□ 1.86
VEGFA-232ENST00000640653 FSTL4Q6MZW2 842 aa26.7■■□□□ 1.86
VEGFA-232ENST00000640653 ZC3H3Q8IXZ2 948 aaKnown RBP26.7■■□□□ 1.86
VEGFA-232ENST00000640653 RUBCNQ92622 972 aa26.7■■□□□ 1.86
VEGFA-232ENST00000640653 TWNKQ96RR1 684 aa26.7■■□□□ 1.86
VEGFA-232ENST00000640653 P2RY13Q9BPV8 354 aa26.7■■□□□ 1.86
VEGFA-232ENST00000640653 EPC1Q9H2F5 836 aa26.7■■□□□ 1.86
VEGFA-232ENST00000640653 FBXO44Q9H4M3 255 aa26.7■■□□□ 1.86
VEGFA-232ENST00000640653 RAB20Q9NX57 234 aa26.7■■□□□ 1.86
VEGFA-232ENST00000640653 CILPO75339 1184 aa26.69■■□□□ 1.86
VEGFA-232ENST00000640653 MBL2P11226 248 aaPredicted RBP26.69■■□□□ 1.86
VEGFA-232ENST00000640653 ADORA2BP29275 332 aa26.69■■□□□ 1.86
VEGFA-232ENST00000640653 PPP1R2P41236 205 aa26.69■■□□□ 1.86
VEGFA-232ENST00000640653 MAP3K7CLP57077 242 aa26.69■■□□□ 1.86
VEGFA-232ENST00000640653 ZXDBP98169 803 aa26.69■■□□□ 1.86
VEGFA-232ENST00000640653 DCAF17Q5H9S7 520 aaPredicted RBP26.69■■□□□ 1.86
VEGFA-232ENST00000640653 HECTD3Q5T447 861 aa26.69■■□□□ 1.86
VEGFA-232ENST00000640653 SNX30Q5VWJ9 437 aa26.69■■□□□ 1.86
VEGFA-232ENST00000640653 TTC39CQ8N584 583 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms