RNA–Protein interactions for RNA: ENST00000639595.1

NECAP1-218, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-218ENST00000639595 PPP1R26Q5T8A7 1209 aaPredicted RBP9□□□□□ -0.97
NECAP1-218ENST00000639595 RNF187Q5TA31 235 aaPredicted RBP9□□□□□ -0.97
NECAP1-218ENST00000639595 SH3PXD2AQ5TCZ1 1133 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 OR6B2Q6IFH4 312 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 ARCQ7LC44 396 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 CATSPER4Q7RTX7 472 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 LIMS2Q7Z4I7 341 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 TRABD2AQ86V40 505 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 RFX6Q8HWS3 928 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 UNC45BQ8IWX7 931 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 CRYBG2Q8N1P7 616 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 MICALL1Q8N3F8 863 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 ANKS4BQ8N8V4 417 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 BEST2Q8NFU1 509 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 RSAD2Q8WXG1 361 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 TBCBQ99426 244 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 MRPL45Q9BRJ2 306 aaKnown RBP9□□□□□ -0.97
NECAP1-218ENST00000639595 EIF2AQ9BY44 585 aaKnown RBP9□□□□□ -0.97
NECAP1-218ENST00000639595 NME7Q9Y5B8 376 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 SNX9Q9Y5X1 595 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 MGAMO43451 1857 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 GOLGA6L7A0A1B0GV03 622 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 CCT8L1PA6NM43 557 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 PIRO00625 290 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 SNX3O60493 162 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 GABBR2O75899 941 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 OAS1P00973 400 aaKnown RBP9□□□□□ -0.97
NECAP1-218ENST00000639595 SMIM10L2AP0DMW4 78 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 SMIM10L2BP0DMW5 78 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 RBP3P10745 1247 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 RDXP35241 583 aaKnown RBP9□□□□□ -0.97
NECAP1-218ENST00000639595 PSMC4P43686 418 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 IFNAR2P48551 515 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 YARSP54577 528 aaKnown RBP9□□□□□ -0.97
NECAP1-218ENST00000639595 ARL4CP56559 192 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 SLC6A3Q01959 620 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 PDIA2Q13087 525 aaKnown RBP9□□□□□ -0.97
NECAP1-218ENST00000639595 DPYSL3Q14195 570 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 NOMO1Q15155 1222 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 SOWAHAQ2M3V2 549 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 MORN1Q5T089 497 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 C9orf57Q5W0N0 161 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 PPP1R21Q6ZMI0 780 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 ARHGEF18Q6ZSZ5 1173 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 FAM43BQ6ZT52 329 aaPredicted RBP9□□□□□ -0.97
NECAP1-218ENST00000639595 ACOT1Q86TX2 421 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 PACS2Q86VP3 889 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 MAP7D3Q8IWC1 876 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 ZBED8Q8IZ13 594 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 SPATA18Q8TC71 538 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 DENND1AQ8TEH3 1009 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 HSPH1Q92598 858 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 SGSM3Q96HU1 749 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 PIWIL1Q96J94 861 aaKnown RBP9□□□□□ -0.97
NECAP1-218ENST00000639595 RNF157Q96PX1 679 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 ZNF408Q9H9D4 720 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 SENP1Q9P0U3 644 aa9□□□□□ -0.97
NECAP1-218ENST00000639595 DYNC1LI1Q9Y6G9 523 aaKnown RBP9□□□□□ -0.97
NECAP1-218ENST00000639595 FOXO6A8MYZ6 492 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 RASA4BC9J798 803 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 HAS3O00219 553 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 DNM1LO00429 736 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 PPEF2O14830 753 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 MCF2LO15068 1137 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 PRPF4O43172 522 aaKnown RBP eCLIP8.99□□□□□ -0.97
NECAP1-218ENST00000639595 DYNC1LI2O43237 492 aaPredicted RBP8.99□□□□□ -0.97
NECAP1-218ENST00000639595 RASA4O43374 803 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 PRPSAP2O60256 369 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 VIMP08670 466 aaKnown RBP8.99□□□□□ -0.97
NECAP1-218ENST00000639595 SCNN1AP37088 669 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 CDH6P55285 790 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 GPX6P59796 221 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 MKRN3Q13064 507 aaKnown RBP8.99□□□□□ -0.97
NECAP1-218ENST00000639595 C15orf59Q2T9L4 293 aaPredicted RBP8.99□□□□□ -0.97
NECAP1-218ENST00000639595 ANKRD20A8PQ5CZ79 823 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 EFHC2Q5JST6 749 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 TMCO4Q5TGY1 634 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 ANKRD22Q5VYY1 191 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 SESTD1Q86VW0 696 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 SRRM1Q8IYB3 904 aaKnown RBP8.99□□□□□ -0.97
NECAP1-218ENST00000639595 CCDC13Q8IYE1 715 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 GPATCH11Q8N954 259 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 FAM71DQ8N9W8 422 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 RTP4Q96DX8 246 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 DHRS4Q9BTZ2 278 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 C11orf84Q9BUA3 381 aaPredicted RBP8.99□□□□□ -0.97
NECAP1-218ENST00000639595 CALN1Q9BXU9 219 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 MAK16Q9BXY0 300 aaKnown RBP8.99□□□□□ -0.97
NECAP1-218ENST00000639595 NSRP1Q9H0G5 558 aaKnown RBP8.99□□□□□ -0.97
NECAP1-218ENST00000639595 FAM49AQ9H0Q0 323 aaPredicted RBP8.99□□□□□ -0.97
NECAP1-218ENST00000639595 KCNK9Q9NPC2 374 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 CYLDQ9NQC7 956 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.99□□□□□ -0.97
NECAP1-218ENST00000639595 GDAP2Q9NXN4 497 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 SAMD15Q9P1V8 674 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 TUBGCP4Q9UGJ1 667 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 TBK1Q9UHD2 729 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 UBQLN1Q9UMX0 589 aaKnown RBP8.99□□□□□ -0.97
NECAP1-218ENST00000639595 CLEC11AQ9Y240 323 aa8.99□□□□□ -0.97
NECAP1-218ENST00000639595 CLUHO75153 1309 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms