RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 CCDC6Q16204 474 aa17.95■□□□□ 0.46
SMN2-216ENST00000638794 HSCBQ8IWL3 235 aa17.95■□□□□ 0.46
SMN2-216ENST00000638794 SYAP1Q96A49 352 aaPredicted RBP17.95■□□□□ 0.46
SMN2-216ENST00000638794 LOXL4Q96JB6 756 aa17.95■□□□□ 0.46
SMN2-216ENST00000638794 SMYD3Q9H7B4 428 aa17.95■□□□□ 0.46
SMN2-216ENST00000638794 CNOT1A5YKK6 2376 aaKnown RBP17.94■□□□□ 0.46
SMN2-216ENST00000638794 FOXD2O60548 495 aaPredicted RBP17.94■□□□□ 0.46
SMN2-216ENST00000638794 PHACTR2O75167 634 aa17.94■□□□□ 0.46
SMN2-216ENST00000638794 OAS1P00973 400 aaKnown RBP17.94■□□□□ 0.46
SMN2-216ENST00000638794 PDIA4P13667 645 aaKnown RBP17.94■□□□□ 0.46
SMN2-216ENST00000638794 OPRD1P41143 372 aa17.94■□□□□ 0.46
SMN2-216ENST00000638794 CDH8P55286 799 aa17.94■□□□□ 0.46
SMN2-216ENST00000638794 DNM1Q05193 864 aaKnown RBP17.94■□□□□ 0.46
SMN2-216ENST00000638794 BIRC3Q13489 604 aa17.94■□□□□ 0.46
SMN2-216ENST00000638794 DMC1Q14565 340 aa17.94■□□□□ 0.46
SMN2-216ENST00000638794 GAB4Q2WGN9 574 aa17.94■□□□□ 0.46
SMN2-216ENST00000638794 TDRD10Q5VZ19 366 aaKnown RBP17.94■□□□□ 0.46
SMN2-216ENST00000638794 FILIP1Q7Z7B0 1213 aa17.94■□□□□ 0.46
SMN2-216ENST00000638794 CEP57L1Q8IYX8 460 aa17.94■□□□□ 0.46
SMN2-216ENST00000638794 ACDQ96AP0 544 aa17.94■□□□□ 0.46
SMN2-216ENST00000638794 SLITRK1Q96PX8 696 aa17.94■□□□□ 0.46
SMN2-216ENST00000638794 VRTNQ9H8Y1 702 aa17.94■□□□□ 0.46
SMN2-216ENST00000638794 SMPD4Q9NXE4 827 aa17.94■□□□□ 0.46
SMN2-216ENST00000638794 SERTAD1Q9UHV2 236 aa17.94■□□□□ 0.46
SMN2-216ENST00000638794 CPQQ9Y646 472 aa17.94■□□□□ 0.46
SMN2-216ENST00000638794 ACACBO00763 2458 aa17.93■□□□□ 0.46
SMN2-216ENST00000638794 LRRIQ3A6PVS8 624 aaPredicted RBP17.93■□□□□ 0.46
SMN2-216ENST00000638794 SCAMP3O14828 347 aaKnown RBP17.93■□□□□ 0.46
SMN2-216ENST00000638794 ACTN4O43707 911 aaKnown RBP17.93■□□□□ 0.46
SMN2-216ENST00000638794 KLRC4O43908 158 aa17.93■□□□□ 0.46
SMN2-216ENST00000638794 APBB3O95704 486 aa17.93■□□□□ 0.46
SMN2-216ENST00000638794 CYP17A1P05093 508 aa17.93■□□□□ 0.46
SMN2-216ENST00000638794 STK4Q13043 487 aa17.93■□□□□ 0.46
SMN2-216ENST00000638794 SF3A2Q15428 464 aaKnown RBP17.93■□□□□ 0.46
SMN2-216ENST00000638794 ZNF699Q32M78 642 aa17.93■□□□□ 0.46
SMN2-216ENST00000638794 AASDHQ4L235 1098 aaPredicted RBP17.93■□□□□ 0.46
SMN2-216ENST00000638794 ATL3Q6DD88 541 aa17.93■□□□□ 0.46
SMN2-216ENST00000638794 KIAA0895Q8NCT3 520 aa17.93■□□□□ 0.46
SMN2-216ENST00000638794 GOLGA5Q8TBA6 731 aa17.93■□□□□ 0.46
SMN2-216ENST00000638794 PARD3BQ8TEW8 1205 aa17.93■□□□□ 0.46
SMN2-216ENST00000638794 ELMO3Q96BJ8 720 aa17.93■□□□□ 0.46
SMN2-216ENST00000638794 ZC3H10Q96K80 434 aaKnown RBP17.93■□□□□ 0.46
SMN2-216ENST00000638794 EBF1Q9UH73 591 aa17.93■□□□□ 0.46
SMN2-216ENST00000638794 CFAP45Q9UL16 551 aa17.93■□□□□ 0.46
SMN2-216ENST00000638794 MYH10P35580 1976 aa17.93■□□□□ 0.46
SMN2-216ENST00000638794 EPG5Q9HCE0 2579 aa17.92■□□□□ 0.46
SMN2-216ENST00000638794 ANTXRLA6NF34 631 aa17.92■□□□□ 0.46
SMN2-216ENST00000638794 K7EQS6 105 aa17.92■□□□□ 0.46
SMN2-216ENST00000638794 CLSTN1O94985 981 aa17.92■□□□□ 0.46
SMN2-216ENST00000638794 SLFN14P0C7P3 912 aa17.92■□□□□ 0.46
SMN2-216ENST00000638794 ZNF806P0C7X5 589 aa17.92■□□□□ 0.46
SMN2-216ENST00000638794 YWHAQP27348 245 aa17.92■□□□□ 0.46
SMN2-216ENST00000638794 AP3M2P53677 418 aa17.92■□□□□ 0.46
SMN2-216ENST00000638794 CLDN10P78369 228 aa17.92■□□□□ 0.46
SMN2-216ENST00000638794 NCOA4Q13772 614 aa17.92■□□□□ 0.46
SMN2-216ENST00000638794 PLK5Q496M5 336 aa17.92■□□□□ 0.46
SMN2-216ENST00000638794 ZNF667Q5HYK9 610 aa17.92■□□□□ 0.46
SMN2-216ENST00000638794 PPM1JQ5JR12 505 aa17.92■□□□□ 0.46
SMN2-216ENST00000638794 SCARA5Q6ZMJ2 495 aa17.92■□□□□ 0.46
SMN2-216ENST00000638794 NUP93Q8N1F7 819 aa17.92■□□□□ 0.46
SMN2-216ENST00000638794 KIAA1958Q8N8K9 716 aa17.92■□□□□ 0.46
SMN2-216ENST00000638794 PAGE5Q96GU1 130 aa17.92■□□□□ 0.46
SMN2-216ENST00000638794 KCNK16Q96T55 309 aa17.92■□□□□ 0.46
SMN2-216ENST00000638794 RXFP3Q9NSD7 469 aa17.92■□□□□ 0.46
SMN2-216ENST00000638794 CFAP97Q9P2B7 532 aa17.92■□□□□ 0.46
SMN2-216ENST00000638794 RCOR1Q9UKL0 485 aa17.92■□□□□ 0.46
SMN2-216ENST00000638794 DCLK1O15075 740 aa17.91■□□□□ 0.46
SMN2-216ENST00000638794 RTN3O95197 1032 aaPredicted RBP17.91■□□□□ 0.46
SMN2-216ENST00000638794 VNN1O95497 513 aa17.91■□□□□ 0.46
SMN2-216ENST00000638794 C4BPAP04003 597 aaKnown RBP17.91■□□□□ 0.46
SMN2-216ENST00000638794 ADRB1P08588 477 aa17.91■□□□□ 0.46
SMN2-216ENST00000638794 MBL2P11226 248 aaPredicted RBP17.91■□□□□ 0.46
SMN2-216ENST00000638794 SEC13P55735 322 aa17.91■□□□□ 0.46
SMN2-216ENST00000638794 DHCR24Q15392 516 aa17.91■□□□□ 0.46
SMN2-216ENST00000638794 C2orf27AQ580R0 203 aa17.91■□□□□ 0.46
SMN2-216ENST00000638794 PLA2G2CQ5R387 149 aa17.91■□□□□ 0.46
SMN2-216ENST00000638794 PAQR9Q6ZVX9 377 aa17.91■□□□□ 0.46
SMN2-216ENST00000638794 FAM35AQ86V20 835 aa17.91■□□□□ 0.46
SMN2-216ENST00000638794 ADGRG2Q8IZP9 1017 aa17.91■□□□□ 0.46
SMN2-216ENST00000638794 C12orf50Q8NA57 414 aaPredicted RBP17.91■□□□□ 0.46
SMN2-216ENST00000638794 SPRYD3Q8NCJ5 442 aa17.91■□□□□ 0.46
SMN2-216ENST00000638794 CCDC26Q8TAB7 109 aa17.91■□□□□ 0.46
SMN2-216ENST00000638794 USP33Q8TEY7 942 aa17.91■□□□□ 0.46
SMN2-216ENST00000638794 FBXO32Q969P5 355 aa17.91■□□□□ 0.46
SMN2-216ENST00000638794 CNTNAP3BQ96NU0 1288 aa17.91■□□□□ 0.46
SMN2-216ENST00000638794 CNTNAP3Q9BZ76 1288 aa17.91■□□□□ 0.46
SMN2-216ENST00000638794 SDCBP2Q9H190 292 aa17.91■□□□□ 0.46
SMN2-216ENST00000638794 DUSP15Q9H1R2 295 aaPredicted RBP17.91■□□□□ 0.46
SMN2-216ENST00000638794 SMOC1Q9H4F8 434 aa17.91■□□□□ 0.46
SMN2-216ENST00000638794 EXOC1Q9NV70 894 aa17.91■□□□□ 0.46
SMN2-216ENST00000638794 DMAC2Q9NW81 257 aa17.91■□□□□ 0.46
SMN2-216ENST00000638794 PCDHGA5Q9Y5G8 931 aa17.91■□□□□ 0.46
SMN2-216ENST00000638794 NUP205Q92621 2012 aa17.91■□□□□ 0.46
SMN2-216ENST00000638794 ABCA7Q8IZY2 2146 aa17.9■□□□□ 0.46
SMN2-216ENST00000638794 SLC9A3R1O14745 358 aaPredicted RBP17.9■□□□□ 0.46
SMN2-216ENST00000638794 MPLP40238 635 aa17.9■□□□□ 0.46
SMN2-216ENST00000638794 DLG4P78352 724 aa17.9■□□□□ 0.46
SMN2-216ENST00000638794 KMT5BQ4FZB7 885 aa17.9■□□□□ 0.46
SMN2-216ENST00000638794 SLC9A9Q8IVB4 645 aa17.9■□□□□ 0.46
SMN2-216ENST00000638794 PDZD8Q8NEN9 1154 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms