RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 KCNT1Q5JUK3 1230 aa22.77■■□□□ 1.24
SCARB2-212ENST00000638663 OVOS1Q6IE37 1185 aa22.77■■□□□ 1.24
SCARB2-212ENST00000638663 DEFB128Q7Z7B8 93 aa22.77■■□□□ 1.24
SCARB2-212ENST00000638663 MAIP1Q8WWC4 291 aa22.77■■□□□ 1.24
SCARB2-212ENST00000638663 C1orf54Q8WWF1 131 aa22.77■■□□□ 1.24
SCARB2-212ENST00000638663 TOX2Q96NM4 488 aa22.77■■□□□ 1.24
SCARB2-212ENST00000638663 ACBD6Q9BR61 282 aa22.77■■□□□ 1.24
SCARB2-212ENST00000638663 RAB6CQ9H0N0 254 aa22.77■■□□□ 1.24
SCARB2-212ENST00000638663 LRRD1A4D1F6 860 aa22.76■■□□□ 1.23
SCARB2-212ENST00000638663 AP1G2O75843 785 aa22.76■■□□□ 1.23
SCARB2-212ENST00000638663 RABGGTBP53611 331 aa22.76■■□□□ 1.23
SCARB2-212ENST00000638663 ATP11AP98196 1134 aa22.76■■□□□ 1.23
SCARB2-212ENST00000638663 ADIGQ0VDE8 80 aa22.76■■□□□ 1.23
SCARB2-212ENST00000638663 SLC26A9Q7LBE3 791 aa22.76■■□□□ 1.23
SCARB2-212ENST00000638663 CASD1Q96PB1 797 aa22.76■■□□□ 1.23
SCARB2-212ENST00000638663 TRIM51Q9BSJ1 452 aa22.76■■□□□ 1.23
SCARB2-212ENST00000638663 FUT8Q9BYC5 575 aa22.76■■□□□ 1.23
SCARB2-212ENST00000638663 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.76■■□□□ 1.23
SCARB2-212ENST00000638663 ATP11BQ9Y2G3 1177 aa22.76■■□□□ 1.23
SCARB2-212ENST00000638663 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.76■■□□□ 1.23
SCARB2-212ENST00000638663 DPYSL4O14531 572 aa22.76■■□□□ 1.23
SCARB2-212ENST00000638663 SASH3O75995 380 aa22.76■■□□□ 1.23
SCARB2-212ENST00000638663 CXCL10P02778 98 aa22.76■■□□□ 1.23
SCARB2-212ENST00000638663 KRT7P08729 469 aa22.76■■□□□ 1.23
SCARB2-212ENST00000638663 INTS6LQ5JSJ4 861 aaKnown RBP22.76■■□□□ 1.23
SCARB2-212ENST00000638663 KAZNQ674X7 775 aa22.76■■□□□ 1.23
SCARB2-212ENST00000638663 CCDC137Q6PK04 289 aaKnown RBP22.76■■□□□ 1.23
SCARB2-212ENST00000638663 SPOCD1Q6ZMY3 1216 aa22.76■■□□□ 1.23
SCARB2-212ENST00000638663 MYLPFQ96A32 169 aa22.76■■□□□ 1.23
SCARB2-212ENST00000638663 GDAP1L1Q96MZ0 367 aa22.76■■□□□ 1.23
SCARB2-212ENST00000638663 SMOQ99835 787 aa22.76■■□□□ 1.23
SCARB2-212ENST00000638663 USP18Q9UMW8 372 aa22.76■■□□□ 1.23
SCARB2-212ENST00000638663 PCDHB8Q9UN66 801 aa22.76■■□□□ 1.23
SCARB2-212ENST00000638663 TANC1Q9C0D5 1861 aa22.75■■□□□ 1.23
SCARB2-212ENST00000638663 ARHGEF37A1IGU5 675 aa22.75■■□□□ 1.23
SCARB2-212ENST00000638663 TRUB2O95900 331 aaKnown RBP22.75■■□□□ 1.23
SCARB2-212ENST00000638663 KRT10P13645 584 aa22.75■■□□□ 1.23
SCARB2-212ENST00000638663 TYMPP19971 482 aa22.75■■□□□ 1.23
SCARB2-212ENST00000638663 SDC4P31431 198 aa22.75■■□□□ 1.23
SCARB2-212ENST00000638663 PCK1P35558 622 aa22.75■■□□□ 1.23
SCARB2-212ENST00000638663 COILP38432 576 aaPredicted RBP22.75■■□□□ 1.23
SCARB2-212ENST00000638663 KLF1Q13351 362 aaPredicted RBP22.75■■□□□ 1.23
SCARB2-212ENST00000638663 DHX34Q14147 1143 aaKnown RBP22.75■■□□□ 1.23
SCARB2-212ENST00000638663 THEM5Q8N1Q8 247 aa22.75■■□□□ 1.23
SCARB2-212ENST00000638663 C12orf50Q8NA57 414 aaPredicted RBP22.75■■□□□ 1.23
SCARB2-212ENST00000638663 OR10T2Q8NGX3 314 aa22.75■■□□□ 1.23
SCARB2-212ENST00000638663 AENQ8WTP8 325 aaKnown RBP22.75■■□□□ 1.23
SCARB2-212ENST00000638663 ATG4AQ8WYN0 398 aa22.75■■□□□ 1.23
SCARB2-212ENST00000638663 NDRG1Q92597 394 aaKnown RBP22.75■■□□□ 1.23
SCARB2-212ENST00000638663 TMEM209Q96SK2 561 aa22.75■■□□□ 1.23
SCARB2-212ENST00000638663 RHOBTB2Q9BYZ6 727 aa22.75■■□□□ 1.23
SCARB2-212ENST00000638663 NFU1Q9UMS0 254 aa22.75■■□□□ 1.23
SCARB2-212ENST00000638663 R3HDM2Q9Y2K5 976 aaKnown RBP22.75■■□□□ 1.23
SCARB2-212ENST00000638663 CAPN15O75808 1086 aa22.74■■□□□ 1.23
SCARB2-212ENST00000638663 KCNJ1P48048 391 aa22.74■■□□□ 1.23
SCARB2-212ENST00000638663 CACNA2D1P54289 1103 aa22.74■■□□□ 1.23
SCARB2-212ENST00000638663 FAM171BQ6P995 826 aa22.74■■□□□ 1.23
SCARB2-212ENST00000638663 CCDC105Q8IYK2 499 aa22.74■■□□□ 1.23
SCARB2-212ENST00000638663 DNAJC5GQ8N7S2 189 aa22.74■■□□□ 1.23
SCARB2-212ENST00000638663 KCTD13Q8WZ19 329 aa22.74■■□□□ 1.23
SCARB2-212ENST00000638663 KCNK16Q96T55 309 aa22.74■■□□□ 1.23
SCARB2-212ENST00000638663 LRRC19Q9H756 370 aa22.74■■□□□ 1.23
SCARB2-212ENST00000638663 LRRC4Q9HBW1 653 aa22.74■■□□□ 1.23
SCARB2-212ENST00000638663 CHST7Q9NS84 486 aa22.74■■□□□ 1.23
SCARB2-212ENST00000638663 TMEM30AQ9NV96 361 aa22.74■■□□□ 1.23
SCARB2-212ENST00000638663 PCYOX1Q9UHG3 505 aa22.74■■□□□ 1.23
SCARB2-212ENST00000638663 TMEM189-UBE2V1I3L0A0 370 aa22.74■■□□□ 1.23
SCARB2-212ENST00000638663 SCNN1AP37088 669 aa22.74■■□□□ 1.23
SCARB2-212ENST00000638663 PTGIRP43119 386 aa22.74■■□□□ 1.23
SCARB2-212ENST00000638663 TNNT3P45378 269 aaPredicted RBP22.74■■□□□ 1.23
SCARB2-212ENST00000638663 NDUFV1P49821 464 aa22.74■■□□□ 1.23
SCARB2-212ENST00000638663 ADCY2Q08462 1091 aa22.74■■□□□ 1.23
SCARB2-212ENST00000638663 SNX1Q13596 522 aa22.74■■□□□ 1.23
SCARB2-212ENST00000638663 C1orf53Q5VUE5 145 aa22.74■■□□□ 1.23
SCARB2-212ENST00000638663 DDX42Q86XP3 938 aaKnown RBP eCLIP22.74■■□□□ 1.23
SCARB2-212ENST00000638663 JAMLQ86YT9 394 aa22.74■■□□□ 1.23
SCARB2-212ENST00000638663 FAM172AQ8WUF8 416 aa22.74■■□□□ 1.23
SCARB2-212ENST00000638663 PEBP4Q96S96 227 aa22.74■■□□□ 1.23
SCARB2-212ENST00000638663 NRDE2Q9H7Z3 1164 aa22.74■■□□□ 1.23
SCARB2-212ENST00000638663 NGRNQ9NPE2 291 aaKnown RBP22.74■■□□□ 1.23
SCARB2-212ENST00000638663 TMLHEQ9NVH6 421 aa22.74■■□□□ 1.23
SCARB2-212ENST00000638663 UTP11Q9Y3A2 253 aaKnown RBP22.74■■□□□ 1.23
SCARB2-212ENST00000638663 BHMG1C9JSJ3 638 aaPredicted RBP22.73■■□□□ 1.23
SCARB2-212ENST00000638663 ATP8B1O43520 1251 aa22.73■■□□□ 1.23
SCARB2-212ENST00000638663 PARNO95453 639 aaKnown RBP22.73■■□□□ 1.23
SCARB2-212ENST00000638663 HSPA8P11142 646 aaKnown RBP22.73■■□□□ 1.23
SCARB2-212ENST00000638663 FNTAP49354 379 aa22.73■■□□□ 1.23
SCARB2-212ENST00000638663 C1QTNF8P60827 252 aa22.73■■□□□ 1.23
SCARB2-212ENST00000638663 COPS2P61201 443 aa22.73■■□□□ 1.23
SCARB2-212ENST00000638663 YWHAHQ04917 246 aaPredicted RBP22.73■■□□□ 1.23
SCARB2-212ENST00000638663 ADCY1Q08828 1119 aa22.73■■□□□ 1.23
SCARB2-212ENST00000638663 HDXQ7Z353 690 aa22.73■■□□□ 1.23
SCARB2-212ENST00000638663 LRRTM3Q86VH5 581 aa22.73■■□□□ 1.23
SCARB2-212ENST00000638663 SIX6OS1Q8N1H7 587 aa22.73■■□□□ 1.23
SCARB2-212ENST00000638663 ZMIZ2Q8NF64 920 aa22.73■■□□□ 1.23
SCARB2-212ENST00000638663 HSPH1Q92598 858 aa22.73■■□□□ 1.23
SCARB2-212ENST00000638663 ARMC5Q96C12 935 aa22.73■■□□□ 1.23
SCARB2-212ENST00000638663 SMARCD1Q96GM5 515 aa22.73■■□□□ 1.23
SCARB2-212ENST00000638663 PKMYT1Q99640 499 aa22.73■■□□□ 1.23
SCARB2-212ENST00000638663 TRIM31Q9BZY9 425 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms