RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 CA14Q9ULX7 337 aa23.04■■□□□ 1.28
SCN1B-206ENST00000638536 HELZP42694 1942 aaKnown RBP23.04■■□□□ 1.28
SCN1B-206ENST00000638536 SYCE3A1L190 88 aa23.04■■□□□ 1.28
SCN1B-206ENST00000638536 TULP2O00295 520 aa23.04■■□□□ 1.28
SCN1B-206ENST00000638536 CD19P15391 556 aa23.04■■□□□ 1.28
SCN1B-206ENST00000638536 NPR3P17342 541 aa23.04■■□□□ 1.28
SCN1B-206ENST00000638536 YWHAQP27348 245 aa23.04■■□□□ 1.28
SCN1B-206ENST00000638536 YWHAEP62258 255 aaKnown RBP23.04■■□□□ 1.28
SCN1B-206ENST00000638536 MYL5Q02045 173 aa23.04■■□□□ 1.28
SCN1B-206ENST00000638536 AOPEPQ8N6M6 819 aa23.04■■□□□ 1.28
SCN1B-206ENST00000638536 ARL14EPQ8N8R7 260 aaPredicted RBP23.04■■□□□ 1.28
SCN1B-206ENST00000638536 VPS16Q9H269 839 aa23.04■■□□□ 1.28
SCN1B-206ENST00000638536 COL4A2P08572 1712 aa23.03■■□□□ 1.28
SCN1B-206ENST00000638536 PRR33A8MZF0 331 aa23.03■■□□□ 1.28
SCN1B-206ENST00000638536 PSMC3P17980 439 aa23.03■■□□□ 1.28
SCN1B-206ENST00000638536 TRIM21P19474 475 aaKnown RBP23.03■■□□□ 1.28
SCN1B-206ENST00000638536 ZNF132P52740 706 aa23.03■■□□□ 1.28
SCN1B-206ENST00000638536 MFSD6LQ8IWD5 586 aa23.03■■□□□ 1.28
SCN1B-206ENST00000638536 SIX5Q8N196 739 aa23.03■■□□□ 1.28
SCN1B-206ENST00000638536 RBBP8NLQ8NC74 664 aaPredicted RBP23.03■■□□□ 1.28
SCN1B-206ENST00000638536 FBXO32Q969P5 355 aa23.03■■□□□ 1.28
SCN1B-206ENST00000638536 PBXIP1Q96AQ6 731 aa23.03■■□□□ 1.28
SCN1B-206ENST00000638536 RNF38Q9H0F5 515 aa23.03■■□□□ 1.28
SCN1B-206ENST00000638536 ACP6Q9NPH0 428 aa23.03■■□□□ 1.28
SCN1B-206ENST00000638536 TRPM5Q9NZQ8 1165 aa23.03■■□□□ 1.28
SCN1B-206ENST00000638536 TSPAN16Q9UKR8 245 aa23.03■■□□□ 1.28
SCN1B-206ENST00000638536 FBXL21Q9UKT6 434 aa23.03■■□□□ 1.28
SCN1B-206ENST00000638536 FAM92AA1XBS5 289 aa23.02■■□□□ 1.28
SCN1B-206ENST00000638536 PES1O00541 588 aaKnown RBP23.02■■□□□ 1.28
SCN1B-206ENST00000638536 RTN3O95197 1032 aaPredicted RBP23.02■■□□□ 1.28
SCN1B-206ENST00000638536 ABL1P00519 1130 aa23.02■■□□□ 1.28
SCN1B-206ENST00000638536 BRD2P25440 801 aaKnown RBP23.02■■□□□ 1.28
SCN1B-206ENST00000638536 DDX6P26196 483 aaKnown RBP eCLIP23.02■■□□□ 1.28
SCN1B-206ENST00000638536 WEE1P30291 646 aa23.02■■□□□ 1.28
SCN1B-206ENST00000638536 ZXDBP98169 803 aa23.02■■□□□ 1.28
SCN1B-206ENST00000638536 ARHGAP44Q17R89 818 aa23.02■■□□□ 1.28
SCN1B-206ENST00000638536 GOLGA7BQ2TAP0 167 aa23.02■■□□□ 1.28
SCN1B-206ENST00000638536 SGO2Q562F6 1265 aa23.02■■□□□ 1.28
SCN1B-206ENST00000638536 UBA3Q8TBC4 463 aa23.02■■□□□ 1.28
SCN1B-206ENST00000638536 ZFYVE19Q96K21 471 aa23.02■■□□□ 1.28
SCN1B-206ENST00000638536 TRMT61BQ9BVS5 477 aaKnown RBP23.02■■□□□ 1.28
SCN1B-206ENST00000638536 GMIPQ9P107 970 aa23.02■■□□□ 1.28
SCN1B-206ENST00000638536 WNT16Q9UBV4 365 aa23.02■■□□□ 1.28
SCN1B-206ENST00000638536 APEX2Q9UBZ4 518 aa23.02■■□□□ 1.28
SCN1B-206ENST00000638536 CNTN6Q9UQ52 1028 aa23.02■■□□□ 1.28
SCN1B-206ENST00000638536 BECN2A8MW95 431 aa23.01■■□□□ 1.27
SCN1B-206ENST00000638536 O00370 1275 aa23.01■■□□□ 1.27
SCN1B-206ENST00000638536 VDRP11473 427 aa23.01■■□□□ 1.27
SCN1B-206ENST00000638536 ZNF18P17022 549 aa23.01■■□□□ 1.27
SCN1B-206ENST00000638536 GDI1P31150 447 aa23.01■■□□□ 1.27
SCN1B-206ENST00000638536 AVPR1AP37288 418 aa23.01■■□□□ 1.27
SCN1B-206ENST00000638536 DHX40Q8IX18 779 aaKnown RBP23.01■■□□□ 1.27
SCN1B-206ENST00000638536 ANKRD52Q8NB46 1076 aa23.01■■□□□ 1.27
SCN1B-206ENST00000638536 SLITRK1Q96PX8 696 aa23.01■■□□□ 1.27
SCN1B-206ENST00000638536 PAEPP09466 180 aa23■■□□□ 1.27
SCN1B-206ENST00000638536 PDE4CQ08493 712 aa23■■□□□ 1.27
SCN1B-206ENST00000638536 FCHO2Q0JRZ9 810 aa23■■□□□ 1.27
SCN1B-206ENST00000638536 BMP8AQ7Z5Y6 402 aa23■■□□□ 1.27
SCN1B-206ENST00000638536 PIGZQ86VD9 579 aa23■■□□□ 1.27
SCN1B-206ENST00000638536 TDP1Q9NUW8 608 aa23■■□□□ 1.27
SCN1B-206ENST00000638536 ARNTLO00327 626 aa23■■□□□ 1.27
SCN1B-206ENST00000638536 PNMA6AP0CW24 399 aaPredicted RBP23■■□□□ 1.27
SCN1B-206ENST00000638536 ATP1A3P13637 1013 aa23■■□□□ 1.27
SCN1B-206ENST00000638536 KRT5P13647 590 aa23■■□□□ 1.27
SCN1B-206ENST00000638536 HDCP19113 662 aa23■■□□□ 1.27
SCN1B-206ENST00000638536 KLK7P49862 253 aa23■■□□□ 1.27
SCN1B-206ENST00000638536 KIF11P52732 1056 aa23■■□□□ 1.27
SCN1B-206ENST00000638536 PKDCCQ504Y2 493 aa23■■□□□ 1.27
SCN1B-206ENST00000638536 APTXQ7Z2E3 356 aaKnown RBP23■■□□□ 1.27
SCN1B-206ENST00000638536 CELF5Q8N6W0 485 aaKnown RBP23■■□□□ 1.27
SCN1B-206ENST00000638536 DNAI2Q9GZS0 605 aa23■■□□□ 1.27
SCN1B-206ENST00000638536 BRD9Q9H8M2 597 aa23■■□□□ 1.27
SCN1B-206ENST00000638536 OSER1Q9NX31 292 aa23■■□□□ 1.27
SCN1B-206ENST00000638536 EHD2Q9NZN4 543 aa23■■□□□ 1.27
SCN1B-206ENST00000638536 MYOFQ9NZM1 2061 aa22.99■■□□□ 1.27
SCN1B-206ENST00000638536 TRAV19A0A0A6YYK7 116 aa22.99■■□□□ 1.27
SCN1B-206ENST00000638536 DPYSL4O14531 572 aa22.99■■□□□ 1.27
SCN1B-206ENST00000638536 CYP26A1O43174 497 aa22.99■■□□□ 1.27
SCN1B-206ENST00000638536 OAS1P00973 400 aaKnown RBP22.99■■□□□ 1.27
SCN1B-206ENST00000638536 CKMP06732 381 aa22.99■■□□□ 1.27
SCN1B-206ENST00000638536 ZDHHC11BP0C7U3 371 aa22.99■■□□□ 1.27
SCN1B-206ENST00000638536 MFAP3P55082 362 aa22.99■■□□□ 1.27
SCN1B-206ENST00000638536 DEPDC1BQ8WUY9 529 aa22.99■■□□□ 1.27
SCN1B-206ENST00000638536 E2F7Q96AV8 911 aa22.99■■□□□ 1.27
SCN1B-206ENST00000638536 PNPLA8Q9NP80 782 aa22.99■■□□□ 1.27
SCN1B-206ENST00000638536 HEBP1Q9NRV9 189 aa22.99■■□□□ 1.27
SCN1B-206ENST00000638536 ZMYM5Q9UJ78 669 aa22.99■■□□□ 1.27
SCN1B-206ENST00000638536 DNAJC12Q9UKB3 198 aa22.99■■□□□ 1.27
SCN1B-206ENST00000638536 KMT2EQ8IZD2 1858 aa22.98■■□□□ 1.27
SCN1B-206ENST00000638536 SHISA7A6NL88 538 aa22.98■■□□□ 1.27
SCN1B-206ENST00000638536 SOBPA7XYQ1 873 aa22.98■■□□□ 1.27
SCN1B-206ENST00000638536 SLC44A4Q53GD3 710 aa22.98■■□□□ 1.27
SCN1B-206ENST00000638536 LCLAT1Q6UWP7 414 aa22.98■■□□□ 1.27
SCN1B-206ENST00000638536 TTC16Q8NEE8 873 aa22.98■■□□□ 1.27
SCN1B-206ENST00000638536 BPIFB1Q8TDL5 484 aa22.98■■□□□ 1.27
SCN1B-206ENST00000638536 CCSER2Q9H7U1 834 aa22.98■■□□□ 1.27
SCN1B-206ENST00000638536 NMUR1Q9HB89 426 aa22.98■■□□□ 1.27
SCN1B-206ENST00000638536 ARHGEF3Q9NR81 526 aa22.98■■□□□ 1.27
SCN1B-206ENST00000638536 COMMD8Q9NX08 183 aa22.98■■□□□ 1.27
SCN1B-206ENST00000638536 OBP2AQ9NY56 170 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms