RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 PCGF5Q86SE9 256 aa22.52■■□□□ 1.2
CLN6-224ENST00000638076 UNC45BQ8IWX7 931 aa22.52■■□□□ 1.2
CLN6-224ENST00000638076 ZBED8Q8IZ13 594 aa22.52■■□□□ 1.2
CLN6-224ENST00000638076 SLC35F5Q8WV83 523 aa22.52■■□□□ 1.2
CLN6-224ENST00000638076 SLC4A5Q9BY07 1137 aa22.52■■□□□ 1.2
CLN6-224ENST00000638076 RASSF4Q9H2L5 321 aa22.52■■□□□ 1.2
CLN6-224ENST00000638076 KLK14Q9P0G3 267 aa22.52■■□□□ 1.2
CLN6-224ENST00000638076 GOLGA8MH3BSY2 632 aa22.51■■□□□ 1.19
CLN6-224ENST00000638076 HCRTO43612 131 aa22.51■■□□□ 1.19
CLN6-224ENST00000638076 ENDOD1O94919 500 aa22.51■■□□□ 1.19
CLN6-224ENST00000638076 MYL3P08590 195 aa22.51■■□□□ 1.19
CLN6-224ENST00000638076 AXLP30530 894 aa22.51■■□□□ 1.19
CLN6-224ENST00000638076 CENPUQ71F23 418 aa22.51■■□□□ 1.19
CLN6-224ENST00000638076 SCUBE3Q8IX30 993 aa22.51■■□□□ 1.19
CLN6-224ENST00000638076 RRAGCQ9HB90 399 aa22.51■■□□□ 1.19
CLN6-224ENST00000638076 DOCK3Q8IZD9 2030 aa22.51■■□□□ 1.19
CLN6-224ENST00000638076 A8MXQ7 604 aa22.51■■□□□ 1.19
CLN6-224ENST00000638076 BEX3Q00994 111 aa22.51■■□□□ 1.19
CLN6-224ENST00000638076 SLC6A3Q01959 620 aa22.51■■□□□ 1.19
CLN6-224ENST00000638076 IRF5Q13568 498 aa22.51■■□□□ 1.19
CLN6-224ENST00000638076 CCDC142Q17RM4 750 aa22.51■■□□□ 1.19
CLN6-224ENST00000638076 GKAP1Q5VSY0 366 aaPredicted RBP22.51■■□□□ 1.19
CLN6-224ENST00000638076 C6orf89Q6UWU4 347 aa22.51■■□□□ 1.19
CLN6-224ENST00000638076 TMEM110Q86TL2 294 aa22.51■■□□□ 1.19
CLN6-224ENST00000638076 UNC93AQ86WB7 457 aa22.51■■□□□ 1.19
CLN6-224ENST00000638076 OTUD6BQ8N6M0 293 aa22.51■■□□□ 1.19
CLN6-224ENST00000638076 C7orf31Q8N865 590 aa22.51■■□□□ 1.19
CLN6-224ENST00000638076 SPATA18Q8TC71 538 aa22.51■■□□□ 1.19
CLN6-224ENST00000638076 MGARPQ8TDB4 240 aa22.51■■□□□ 1.19
CLN6-224ENST00000638076 CCDC134Q9H6E4 229 aa22.51■■□□□ 1.19
CLN6-224ENST00000638076 SMIM28A0A1B0GU29 152 aa22.5■■□□□ 1.19
CLN6-224ENST00000638076 HAS3O00219 553 aa22.5■■□□□ 1.19
CLN6-224ENST00000638076 IGF2BP3O00425 579 aaKnown RBP eCLIP22.5■■□□□ 1.19
CLN6-224ENST00000638076 MCF2LO15068 1137 aa22.5■■□□□ 1.19
CLN6-224ENST00000638076 SETSIPP0DME0 302 aa22.5■■□□□ 1.19
CLN6-224ENST00000638076 RBP3P10745 1247 aa22.5■■□□□ 1.19
CLN6-224ENST00000638076 RPL22P35268 128 aaKnown RBP22.5■■□□□ 1.19
CLN6-224ENST00000638076 PDIA2Q13087 525 aaKnown RBP22.5■■□□□ 1.19
CLN6-224ENST00000638076 DPYSL3Q14195 570 aa22.5■■□□□ 1.19
CLN6-224ENST00000638076 FBXO47Q5MNV8 452 aa22.5■■□□□ 1.19
CLN6-224ENST00000638076 NPNTQ6UXI9 565 aa22.5■■□□□ 1.19
CLN6-224ENST00000638076 YTHDF3Q7Z739 585 aaKnown RBP22.5■■□□□ 1.19
CLN6-224ENST00000638076 PPIL6Q8IXY8 311 aa22.5■■□□□ 1.19
CLN6-224ENST00000638076 CACNA2D3Q8IZS8 1091 aa22.5■■□□□ 1.19
CLN6-224ENST00000638076 FAM71DQ8N9W8 422 aa22.5■■□□□ 1.19
CLN6-224ENST00000638076 CPT1BQ92523 772 aa22.5■■□□□ 1.19
CLN6-224ENST00000638076 KCNK9Q9NPC2 374 aa22.5■■□□□ 1.19
CLN6-224ENST00000638076 EURLQ9NYK6 297 aa22.5■■□□□ 1.19
CLN6-224ENST00000638076 EXOC1LA0A1B0GW35 172 aa22.49■■□□□ 1.19
CLN6-224ENST00000638076 ALOX15BO15296 676 aa22.49■■□□□ 1.19
CLN6-224ENST00000638076 PAPSS1O43252 624 aaPredicted RBP22.49■■□□□ 1.19
CLN6-224ENST00000638076 CPT1AP50416 773 aa22.49■■□□□ 1.19
CLN6-224ENST00000638076 LRRC14Q15048 493 aa22.49■■□□□ 1.19
CLN6-224ENST00000638076 ANKRD22Q5VYY1 191 aa22.49■■□□□ 1.19
CLN6-224ENST00000638076 CST9Q5W186 159 aa22.49■■□□□ 1.19
CLN6-224ENST00000638076 SCYL2Q6P3W7 929 aa22.49■■□□□ 1.19
CLN6-224ENST00000638076 CAPN12Q6ZSI9 719 aa22.49■■□□□ 1.19
CLN6-224ENST00000638076 TAB3Q8N5C8 712 aaPredicted RBP22.49■■□□□ 1.19
CLN6-224ENST00000638076 B3GNT5Q9BYG0 378 aa22.49■■□□□ 1.19
CLN6-224ENST00000638076 RNF39Q9H2S5 420 aa22.49■■□□□ 1.19
CLN6-224ENST00000638076 NGRNQ9NPE2 291 aaKnown RBP22.49■■□□□ 1.19
CLN6-224ENST00000638076 PIRO00625 290 aa22.49■■□□□ 1.19
CLN6-224ENST00000638076 BANF1O75531 89 aa22.49■■□□□ 1.19
CLN6-224ENST00000638076 GABBR2O75899 941 aa22.49■■□□□ 1.19
CLN6-224ENST00000638076 BRAFP15056 766 aa22.49■■□□□ 1.19
CLN6-224ENST00000638076 SDC4P31431 198 aa22.49■■□□□ 1.19
CLN6-224ENST00000638076 HUNKP57058 714 aa22.49■■□□□ 1.19
CLN6-224ENST00000638076 GAD2Q05329 585 aa22.49■■□□□ 1.19
CLN6-224ENST00000638076 SESTD1Q86VW0 696 aa22.49■■□□□ 1.19
CLN6-224ENST00000638076 FAM172AQ8WUF8 416 aa22.49■■□□□ 1.19
CLN6-224ENST00000638076 KHSRPQ92945 711 aaKnown RBP eCLIP22.49■■□□□ 1.198e-8■□□□□ 8.3
CLN6-224ENST00000638076 CABS1Q96KC9 395 aa22.49■■□□□ 1.19
CLN6-224ENST00000638076 VPS37BQ9H9H4 285 aa22.49■■□□□ 1.19
CLN6-224ENST00000638076 DPYSL4O14531 572 aa22.48■■□□□ 1.19
CLN6-224ENST00000638076 CD4P01730 458 aa22.48■■□□□ 1.19
CLN6-224ENST00000638076 PDGFRBP09619 1106 aa22.48■■□□□ 1.19
CLN6-224ENST00000638076 CYP2B6P20813 491 aa22.48■■□□□ 1.19
CLN6-224ENST00000638076 LIG3P49916 1009 aa22.48■■□□□ 1.19
CLN6-224ENST00000638076 KRT81Q14533 505 aa22.48■■□□□ 1.19
CLN6-224ENST00000638076 HIF1AQ16665 826 aa22.48■■□□□ 1.19
CLN6-224ENST00000638076 RNF187Q5TA31 235 aaPredicted RBP22.48■■□□□ 1.19
CLN6-224ENST00000638076 ARHGAP17Q68EM7 881 aa22.48■■□□□ 1.19
CLN6-224ENST00000638076 TADA2BQ86TJ2 420 aa22.48■■□□□ 1.19
CLN6-224ENST00000638076 LRRC34Q8IZ02 419 aa22.48■■□□□ 1.19
CLN6-224ENST00000638076 NAT8LQ8N9F0 302 aa22.48■■□□□ 1.19
CLN6-224ENST00000638076 KBTBD7Q8WVZ9 684 aa22.48■■□□□ 1.19
CLN6-224ENST00000638076 DYDC1Q8WWB3 177 aa22.48■■□□□ 1.19
CLN6-224ENST00000638076 SPTLC1O15269 473 aa22.48■■□□□ 1.19
CLN6-224ENST00000638076 TMED2Q15363 201 aa22.48■■□□□ 1.19
CLN6-224ENST00000638076 TAF1CQ15572 869 aaPredicted RBP22.48■■□□□ 1.19
CLN6-224ENST00000638076 ZC3H18Q86VM9 953 aaKnown RBP22.48■■□□□ 1.19
CLN6-224ENST00000638076 SRRM1Q8IYB3 904 aaKnown RBP22.48■■□□□ 1.19
CLN6-224ENST00000638076 CCDC13Q8IYE1 715 aa22.48■■□□□ 1.19
CLN6-224ENST00000638076 ANKRD42Q8N9B4 389 aa22.48■■□□□ 1.19
CLN6-224ENST00000638076 P3H4Q92791 437 aa22.48■■□□□ 1.19
CLN6-224ENST00000638076 GPATCH2LQ9NWQ4 482 aa22.48■■□□□ 1.19
CLN6-224ENST00000638076 KPNA7A9QM74 516 aa22.47■■□□□ 1.19
CLN6-224ENST00000638076 FGFR1P11362 822 aa22.47■■□□□ 1.19
CLN6-224ENST00000638076 CCDC130P13994 396 aa22.47■■□□□ 1.19
CLN6-224ENST00000638076 LMO2P25791 158 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms