RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 CTNNAL1Q9UBT7 734 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.69□□□□□ -0.38
CLN8-212ENST00000637083 NRCAMQ92823 1304 aa12.69□□□□□ -0.38
CLN8-212ENST00000637083 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.68□□□□□ -0.38
CLN8-212ENST00000637083 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.68□□□□□ -0.38
CLN8-212ENST00000637083 SMIM35A0A1B0GVV1 85 aa12.68□□□□□ -0.38
CLN8-212ENST00000637083 POC1B-GALNT4F8VUJ3 575 aa12.68□□□□□ -0.38
CLN8-212ENST00000637083 PRPF4O43172 522 aaKnown RBP eCLIP12.68□□□□□ -0.385e-6■■■□□ 18.8
CLN8-212ENST00000637083 SNX3O60493 162 aa12.68□□□□□ -0.38
CLN8-212ENST00000637083 KRT15P19012 456 aa12.68□□□□□ -0.38
CLN8-212ENST00000637083 SDC4P31431 198 aa12.68□□□□□ -0.38
CLN8-212ENST00000637083 GEMIN4P57678 1058 aaKnown RBP12.68□□□□□ -0.38
CLN8-212ENST00000637083 GOLGA7BQ2TAP0 167 aa12.68□□□□□ -0.38
CLN8-212ENST00000637083 NUGGCQ68CJ6 796 aa12.68□□□□□ -0.38
CLN8-212ENST00000637083 C4orf22Q6V702 233 aa12.68□□□□□ -0.38
CLN8-212ENST00000637083 FAM183BPQ6ZVS7 135 aa12.68□□□□□ -0.38
CLN8-212ENST00000637083 TRABD2AQ86V40 505 aa12.68□□□□□ -0.38
CLN8-212ENST00000637083 NAT8LQ8N9F0 302 aa12.68□□□□□ -0.38
CLN8-212ENST00000637083 SPATA18Q8TC71 538 aa12.68□□□□□ -0.38
CLN8-212ENST00000637083 SNX27Q96L92 541 aa12.68□□□□□ -0.38
CLN8-212ENST00000637083 SSU72Q9NP77 194 aaKnown RBP12.68□□□□□ -0.38
CLN8-212ENST00000637083 UBQLN1Q9UMX0 589 aaKnown RBP12.68□□□□□ -0.38
CLN8-212ENST00000637083 USP15Q9Y4E8 981 aaPredicted RBP12.68□□□□□ -0.38
CLN8-212ENST00000637083 PCNTO95613 3336 aa12.68□□□□□ -0.38
CLN8-212ENST00000637083 SLC15A5A6NIM6 579 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 ZNF487B1APH4 448 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 TCP11X1B4DZS4 312 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 E5RJQ4 531 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 E7ESA3 106 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 SPAG6O75602 509 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 CD4P01730 458 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 TGM2P21980 687 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 RPL22P35268 128 aaKnown RBP12.67□□□□□ -0.38
CLN8-212ENST00000637083 SLC6A3Q01959 620 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 LRRC14Q15048 493 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 NOMO1Q15155 1222 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 FAM110CQ1W6H9 321 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 ZC3H12AQ5D1E8 599 aaKnown RBP12.67□□□□□ -0.38
CLN8-212ENST00000637083 DARS2Q6PI48 645 aaKnown RBP12.67□□□□□ -0.38
CLN8-212ENST00000637083 TMEM110Q86TL2 294 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 PALM2Q8IXS6 379 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 CYP4X1Q8N118 509 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 CPT1BQ92523 772 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 SLC4A5Q9BY07 1137 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 TRIM6Q9C030 488 aaPredicted RBP12.67□□□□□ -0.38
CLN8-212ENST00000637083 CYLDQ9NQC7 956 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.67□□□□□ -0.38
CLN8-212ENST00000637083 SNX9Q9Y5X1 595 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 ECM2O94769 699 aaPredicted RBP12.67□□□□□ -0.38
CLN8-212ENST00000637083 TOMM70O94826 608 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 SCNN1AP37088 669 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 PNPLA4P41247 253 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 RNASELQ05823 741 aaKnown RBP12.67□□□□□ -0.38
CLN8-212ENST00000637083 DPYSL3Q14195 570 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 SPARCL1Q14515 664 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 EFHC2Q5JST6 749 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 ARHGAP17Q68EM7 881 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 TRPM8Q7Z2W7 1104 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 ZNF560Q96MR9 790 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 RNF157Q96PX1 679 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 TGS1Q96RS0 853 aaKnown RBP12.67□□□□□ -0.38
CLN8-212ENST00000637083 ADAMTS10Q9H324 1103 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 TRABDQ9H4I3 376 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 SNTG2Q9NY99 539 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 PAK5Q9P286 719 aa12.67□□□□□ -0.38
CLN8-212ENST00000637083 SCN4AP35499 1836 aa12.66□□□□□ -0.38
CLN8-212ENST00000637083 MDM4O15151 490 aa12.66□□□□□ -0.38
CLN8-212ENST00000637083 DNAJC8O75937 253 aaPredicted RBP12.66□□□□□ -0.38
CLN8-212ENST00000637083 CD48P09326 243 aa12.66□□□□□ -0.38
CLN8-212ENST00000637083 CREB1P16220 341 aa12.66□□□□□ -0.38
CLN8-212ENST00000637083 SCTRP47872 440 aa12.66□□□□□ -0.38
CLN8-212ENST00000637083 ZBTB6Q15916 424 aa12.66□□□□□ -0.38
CLN8-212ENST00000637083 KIZQ2M2Z5 673 aa12.66□□□□□ -0.38
CLN8-212ENST00000637083 PPP1R26Q5T8A7 1209 aaPredicted RBP12.66□□□□□ -0.38
CLN8-212ENST00000637083 ARCQ7LC44 396 aa12.66□□□□□ -0.38
CLN8-212ENST00000637083 TMEM130Q8N3G9 435 aa12.66□□□□□ -0.38
CLN8-212ENST00000637083 SETD4Q9NVD3 440 aa12.66□□□□□ -0.38
CLN8-212ENST00000637083 CNTN3Q9P232 1028 aa12.66□□□□□ -0.38
CLN8-212ENST00000637083 SAE1Q9UBE0 346 aaPredicted RBP12.66□□□□□ -0.38
CLN8-212ENST00000637083 XPO7Q9UIA9 1087 aaKnown RBP12.66□□□□□ -0.38
CLN8-212ENST00000637083 ZMYND8Q9ULU4 1186 aaPredicted RBP12.66□□□□□ -0.38
CLN8-212ENST00000637083 ARL2BPQ9Y2Y0 163 aa12.66□□□□□ -0.38
CLN8-212ENST00000637083 MGAMO43451 1857 aa12.66□□□□□ -0.38
CLN8-212ENST00000637083 A6NJR5 290 aa12.66□□□□□ -0.38
CLN8-212ENST00000637083 H7C0C1 242 aa12.66□□□□□ -0.38
CLN8-212ENST00000637083 APOL1O14791 398 aa12.66□□□□□ -0.38
CLN8-212ENST00000637083 CHADO15335 359 aa12.66□□□□□ -0.38
CLN8-212ENST00000637083 PFKMP08237 780 aa12.66□□□□□ -0.38
CLN8-212ENST00000637083 ZFXP17010 805 aaPredicted RBP12.66□□□□□ -0.38
CLN8-212ENST00000637083 ACADSBP45954 432 aa12.66□□□□□ -0.38
CLN8-212ENST00000637083 ATP5OP48047 213 aa12.66□□□□□ -0.38
CLN8-212ENST00000637083 GDF10P55107 478 aa12.66□□□□□ -0.38
CLN8-212ENST00000637083 BASP1P80723 227 aaKnown RBP12.66□□□□□ -0.38
CLN8-212ENST00000637083 CBLBQ13191 982 aa12.66□□□□□ -0.38
CLN8-212ENST00000637083 PKDCCQ504Y2 493 aa12.66□□□□□ -0.38
CLN8-212ENST00000637083 SPATA21Q7Z572 469 aa12.66□□□□□ -0.38
CLN8-212ENST00000637083 UNC45BQ8IWX7 931 aa12.66□□□□□ -0.38
CLN8-212ENST00000637083 SLC35F5Q8WV83 523 aa12.66□□□□□ -0.38
CLN8-212ENST00000637083 ALKBH8Q96BT7 664 aaKnown RBP12.66□□□□□ -0.38
CLN8-212ENST00000637083 ZNF670Q9BS34 389 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms