RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 PLLPQ9Y342 182 aa15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 TEX264Q9Y6I9 313 aa15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 STYXL1Q9Y6J8 313 aa15.45■□□□□ 0.06
CACNA1A-220ENST00000635988 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 CCNE2O96020 404 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 SERPINA6P08185 405 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 YWHAGP61981 247 aaKnown RBP eCLIP15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 BASP1P80723 227 aaKnown RBP15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 KDSRQ06136 332 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 BST1Q10588 318 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 TAZQ16635 292 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 SLFN12LQ6IEE8 588 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 ARID3BQ8IVW6 561 aaPredicted RBP15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 OPTNQ96CV9 577 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 CCDC106Q9BWC9 280 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 NDUFA13Q9P0J0 144 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 SOX13Q9UN79 622 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 PCDHA10Q9Y5I2 948 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 TCRBV7S3A2A0A539 114 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 KBTBD13C9JR72 458 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 E5RJQ4 531 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 NFIBO00712 420 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 MCF2LO15068 1137 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 CSDE1O75534 798 aaKnown RBP15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 PIM1P11309 404 aaPredicted RBP15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 PTGER2P43116 358 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 RPL26P61254 145 aaKnown RBP15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 ASPHQ12797 758 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 DPYSL3Q14195 570 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 ANGEL2Q5VTE6 544 aaKnown RBP15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 FAM81AQ8TBF8 368 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 CLEC4DQ8WXI8 215 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 ATP6V0A1Q93050 837 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 ACAP3Q96P50 834 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 NDNQ99608 321 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 CGRRF1Q99675 332 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 FBXO28Q9NVF7 368 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 SIRPGQ9P1W8 387 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 SAE1Q9UBE0 346 aaPredicted RBP15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 NUB1Q9Y5A7 615 aa15.44■□□□□ 0.06
CACNA1A-220ENST00000635988 TRIM49D1C9J1S8 452 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 CREB3O43889 395 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 STAM2O75886 525 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 WEE2P0C1S8 567 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 PABPC4LP0CB38 370 aaKnown RBP15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 NLRP11P59045 1033 aaKnown RBP15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 MED21Q13503 144 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 HIC1Q14526 733 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 SMYD5Q6GMV2 418 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 OR6Y1Q8NGX8 325 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 SYTL5Q8TDW5 730 aaPredicted RBP15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 STK32BQ9NY57 414 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 RBAKQ9NYW8 714 aaPredicted RBP15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 TMOD2Q9NZR1 351 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 SLC9A2Q9UBY0 812 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 APOC4-APOC2K7ER74 178 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 BUD23O43709 281 aaKnown RBP15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 APOC2P02655 101 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 AOC1P19801 751 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 EIF4BP23588 611 aaKnown RBP15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 KDELR1P24390 212 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 PSMA2P25787 234 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 EIF3EP60228 445 aaKnown RBP15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 IRX4P78413 519 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 SLC25A11Q02978 314 aaKnown RBP15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 WASHC5Q12768 1159 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 LSAMPQ13449 338 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 MAP3K21Q5TCX8 1036 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 TAS1R3Q7RTX0 852 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 RASSF3Q86WH2 238 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 PDSS2Q86YH6 399 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 NUDCD3Q8IVD9 361 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 UNC45BQ8IWX7 931 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 FAM172AQ8WUF8 416 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 FAM210AQ96ND0 272 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 S100A14Q9HCY8 104 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 PPM1HQ9ULR3 514 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 SSX2IPQ9Y2D8 614 aa15.43■□□□□ 0.06
CACNA1A-220ENST00000635988 TRDMT1O14717 391 aaKnown RBP15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 BIRC5O15392 142 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 POLR2BP30876 1174 aaKnown RBP15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 CDH5P33151 784 aaPredicted RBP15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 CCNFP41002 786 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 ACOT2P49753 483 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 AQP5P55064 265 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 MAP3K10Q02779 954 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 ZYXQ15942 572 aaKnown RBP15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 DBN1Q16643 649 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 CFAP157Q5JU67 520 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 EFHC1Q5JVL4 640 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 DHDDSQ86SQ9 333 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 IGDCC3Q8IVU1 814 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 UBR7Q8N806 425 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 FAM71DQ8N9W8 422 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 FBXO27Q8NI29 283 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 FNIP1Q8TF40 1166 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 JADE3Q92613 823 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 RILPQ96NA2 401 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 PDLIM7Q9NR12 457 aa15.42■□□□□ 0.06
CACNA1A-220ENST00000635988 PTPRJQ12913 1337 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms