RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 DEFB107AQ8IZN7 70 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 KIAA0895Q8NCT3 520 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 SCFD2Q8WU76 684 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 PGM2Q96G03 612 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 BAATQ14032 418 aaPredicted RBP12.08□□□□□ -0.48
COL11A1-211ENST00000635193 MAPRE1Q15691 268 aaKnown RBP12.08□□□□□ -0.48
COL11A1-211ENST00000635193 MEA1Q16626 185 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 ARMC4Q5T2S8 1044 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 TBC1D16Q8TBP0 767 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 TFB1MQ8WVM0 346 aaKnown RBP12.08□□□□□ -0.48
COL11A1-211ENST00000635193 SGF29Q96ES7 293 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 FAM49BQ9NUQ9 324 aa12.08□□□□□ -0.48
COL11A1-211ENST00000635193 CPS1P31327 1500 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 PTPRMP28827 1452 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 FAM205AQ6ZU69 1335 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 KANSL1LA0AUZ9 987 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 IL18RAPO95256 599 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 PSMG1O95456 288 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 PTK2BQ14289 1009 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 PKN1Q16512 942 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 EXD1Q8NHP7 514 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 TMEM121Q9BTD3 319 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 GRIP2Q9C0E4 1043 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 CEP44Q9C0F1 390 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 ANKEF1Q9NU02 776 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 PDZK1P1A8MUH7 402 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 TULP2O00295 520 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 RAG1P15918 1043 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 IL12RB1P42701 662 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 ARHGEF6Q15052 776 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 SEC23AQ15436 765 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 BNIPLQ7Z465 357 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 MCRS1Q96EZ8 462 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 TRIM8Q9BZR9 551 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 SRRM3A6NNA2 597 aaPredicted RBP12.07□□□□□ -0.48
COL11A1-211ENST00000635193 ZNF197O14709 1029 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 PROSCO94903 275 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 CBX6O95503 412 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 RRM1P23921 792 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 TP53BP2Q13625 1128 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 NAPEPLDQ6IQ20 393 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 BBS7Q8IWZ6 715 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 IPMKQ8NFU5 416 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 DIS3LQ8TF46 1054 aaKnown RBP12.07□□□□□ -0.48
COL11A1-211ENST00000635193 KCNH7Q9NS40 1196 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 RIC8BQ9NVN3 520 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 RPS6KL1Q9Y6S9 549 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 ADGRA2Q96PE1 1338 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 NEXMIFQ5QGS0 1516 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 ZNF263O14978 683 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 NDUFS3O75489 264 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 PDGFRBP09619 1106 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 ADRA2BP18089 450 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 YY1P25490 414 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 PEX5P50542 639 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 DDR1Q08345 913 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 PCSK7Q16549 785 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 GOLGA7BQ2TAP0 167 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 KCNT1Q5JUK3 1230 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 RNF219Q5W0B1 726 aaPredicted RBP12.07□□□□□ -0.48
COL11A1-211ENST00000635193 PDPK2PQ6A1A2 396 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 CDC42EP5Q6NZY7 148 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 CBWD2Q8IUF1 395 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 KLHL23Q8NBE8 558 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 TATDN2Q93075 761 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 MAGED4Q96JG8 741 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 PPP1R2P1Q96PQ5 205 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 GCNAQ96QF7 691 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 SAR1AQ9NR31 198 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 POLE3Q9NRF9 147 aa12.07□□□□□ -0.48
COL11A1-211ENST00000635193 FCHO1O14526 889 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 LCA5LO95447 670 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 NR3C2P08235 984 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 ACADSBP45954 432 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 MCL1Q07820 350 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 FAM83EQ2M2I3 478 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 ARHGAP17Q68EM7 881 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 SPOCD1Q6ZMY3 1216 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 CCNJLQ8IV13 435 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 ARL10Q8N8L6 244 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 IMPAD1Q9NX62 359 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 TUBA8Q9NY65 449 aaPredicted RBP12.06□□□□□ -0.48
COL11A1-211ENST00000635193 PHGDHO43175 533 aaKnown RBP12.06□□□□□ -0.48
COL11A1-211ENST00000635193 ATXN8OSP0DMR3 200 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 TGM2P21980 687 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 CACNB2Q08289 660 aaPredicted RBP12.06□□□□□ -0.48
COL11A1-211ENST00000635193 DENND5BQ6ZUT9 1274 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 EFL1Q7Z2Z2 1120 aaKnown RBP12.06□□□□□ -0.48
COL11A1-211ENST00000635193 ECSITQ9BQ95 431 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 MMADHCQ9H3L0 296 aaPredicted RBP12.06□□□□□ -0.48
COL11A1-211ENST00000635193 CD274Q9NZQ7 290 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 OPLAHO14841 1288 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 MTSS1O43312 755 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 ZNF862O60290 1169 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 RALBP11234 206 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 CHRNB3Q05901 458 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.06□□□□□ -0.48
COL11A1-211ENST00000635193 SPDYCQ5MJ68 293 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 SEL1L3Q68CR1 1132 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 TAF2Q6P1X5 1199 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms