RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 FAM26FQ5R3K3 315 aa20.21■□□□□ 0.83
SMN2-215ENST00000628696 NELFCDQ8IXH7 590 aa20.21■□□□□ 0.83
SMN2-215ENST00000628696 LINC00301Q8NCQ3 95 aa20.21■□□□□ 0.83
SMN2-215ENST00000628696 ZNF507Q8TCN5 953 aa20.21■□□□□ 0.83
SMN2-215ENST00000628696 CGRRF1Q99675 332 aa20.21■□□□□ 0.83
SMN2-215ENST00000628696 DPEP3Q9H4B8 488 aa20.21■□□□□ 0.83
SMN2-215ENST00000628696 AGPAT3Q9NRZ7 376 aa20.21■□□□□ 0.83
SMN2-215ENST00000628696 NXF1Q9UBU9 619 aaKnown RBP20.21■□□□□ 0.83
SMN2-215ENST00000628696 C4orf47A7E2U8 309 aa20.2■□□□□ 0.82
SMN2-215ENST00000628696 CLDN5O00501 218 aa20.2■□□□□ 0.82
SMN2-215ENST00000628696 SLC9A3R1O14745 358 aaPredicted RBP20.2■□□□□ 0.82
SMN2-215ENST00000628696 TGFB1I1O43294 461 aa20.2■□□□□ 0.82
SMN2-215ENST00000628696 TACC1O75410 805 aa20.2■□□□□ 0.82
SMN2-215ENST00000628696 CLSTN1O94985 981 aa20.2■□□□□ 0.82
SMN2-215ENST00000628696 PMLP29590 882 aa20.2■□□□□ 0.82
SMN2-215ENST00000628696 SLC6A11P48066 632 aa20.2■□□□□ 0.82
SMN2-215ENST00000628696 CACNA2D1P54289 1103 aa20.2■□□□□ 0.82
SMN2-215ENST00000628696 CYP24A1Q07973 514 aa20.2■□□□□ 0.82
SMN2-215ENST00000628696 PSMD6Q15008 389 aa20.2■□□□□ 0.82
SMN2-215ENST00000628696 DHCR24Q15392 516 aa20.2■□□□□ 0.82
SMN2-215ENST00000628696 E2F4Q16254 413 aa20.2■□□□□ 0.82
SMN2-215ENST00000628696 GAB4Q2WGN9 574 aa20.2■□□□□ 0.82
SMN2-215ENST00000628696 EPM2AIP1Q7L775 607 aaPredicted RBP20.2■□□□□ 0.82
SMN2-215ENST00000628696 ADGRG2Q8IZP9 1017 aa20.2■□□□□ 0.82
SMN2-215ENST00000628696 INTS4Q96HW7 963 aaKnown RBP20.2■□□□□ 0.82
SMN2-215ENST00000628696 SLITRK1Q96PX8 696 aa20.2■□□□□ 0.82
SMN2-215ENST00000628696 ZNF518BQ9C0D4 1074 aa20.2■□□□□ 0.82
SMN2-215ENST00000628696 CUEDC2Q9H467 287 aa20.2■□□□□ 0.82
SMN2-215ENST00000628696 CFAP97Q9P2B7 532 aa20.2■□□□□ 0.82
SMN2-215ENST00000628696 CIZ1Q9ULV3 898 aaPredicted RBP20.2■□□□□ 0.82
SMN2-215ENST00000628696 MMP17Q9ULZ9 603 aa20.2■□□□□ 0.82
SMN2-215ENST00000628696 MYO18AQ92614 2054 aaKnown RBP20.2■□□□□ 0.82
SMN2-215ENST00000628696 A8MXQ7 604 aa20.19■□□□□ 0.82
SMN2-215ENST00000628696 MBL2P11226 248 aaPredicted RBP20.19■□□□□ 0.82
SMN2-215ENST00000628696 PSAPL1Q6NUJ1 521 aa20.19■□□□□ 0.82
SMN2-215ENST00000628696 C11orf74Q86VG3 221 aa20.19■□□□□ 0.82
SMN2-215ENST00000628696 IQUBQ8NA54 791 aa20.19■□□□□ 0.82
SMN2-215ENST00000628696 XXYLT1Q8NBI6 393 aa20.19■□□□□ 0.82
SMN2-215ENST00000628696 B3GNT5Q9BYG0 378 aa20.19■□□□□ 0.82
SMN2-215ENST00000628696 ELOVL4Q9GZR5 314 aa20.19■□□□□ 0.82
SMN2-215ENST00000628696 KHNYNO15037 678 aaKnown RBP20.18■□□□□ 0.82
SMN2-215ENST00000628696 PHACTR2O75167 634 aa20.18■□□□□ 0.82
SMN2-215ENST00000628696 OAS1P00973 400 aaKnown RBP20.18■□□□□ 0.82
SMN2-215ENST00000628696 APODP05090 189 aa20.18■□□□□ 0.82
SMN2-215ENST00000628696 FAM163BP0C2L3 166 aa20.18■□□□□ 0.82
SMN2-215ENST00000628696 BCKDHBP21953 392 aa20.18■□□□□ 0.82
SMN2-215ENST00000628696 YWHAQP27348 245 aa20.18■□□□□ 0.82
SMN2-215ENST00000628696 TIE1P35590 1138 aa20.18■□□□□ 0.82
SMN2-215ENST00000628696 DHPSP49366 369 aaPredicted RBP20.18■□□□□ 0.82
SMN2-215ENST00000628696 MYL6P60660 151 aa20.18■□□□□ 0.82
SMN2-215ENST00000628696 MRPS21P82921 87 aaKnown RBP20.18■□□□□ 0.82
SMN2-215ENST00000628696 PMS2CLQ68D20 193 aa20.18■□□□□ 0.82
SMN2-215ENST00000628696 SFTPA1Q8IWL2 248 aa20.18■□□□□ 0.82
SMN2-215ENST00000628696 ALLCQ8N6M5 410 aa20.18■□□□□ 0.82
SMN2-215ENST00000628696 TXNDC5Q8NBS9 432 aaKnown RBP20.18■□□□□ 0.82
SMN2-215ENST00000628696 SCFD1Q8WVM8 642 aa20.18■□□□□ 0.82
SMN2-215ENST00000628696 ZNF516Q92618 1163 aa20.18■□□□□ 0.82
SMN2-215ENST00000628696 CNOT6LQ96LI5 555 aaKnown RBP20.18■□□□□ 0.82
SMN2-215ENST00000628696 ZNF396Q96N95 335 aaPredicted RBP20.18■□□□□ 0.82
SMN2-215ENST00000628696 PNKPQ96T60 521 aa20.18■□□□□ 0.82
SMN2-215ENST00000628696 TMEM30AQ9NV96 361 aa20.18■□□□□ 0.82
SMN2-215ENST00000628696 MYH10P35580 1976 aa20.17■□□□□ 0.82
SMN2-215ENST00000628696 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.17■□□□□ 0.82
SMN2-215ENST00000628696 PPP6R2O75170 966 aa20.17■□□□□ 0.82
SMN2-215ENST00000628696 ALDH1A2O94788 518 aa20.17■□□□□ 0.82
SMN2-215ENST00000628696 KLF8O95600 359 aaPredicted RBP20.17■□□□□ 0.82
SMN2-215ENST00000628696 OLFM2O95897 454 aa20.17■□□□□ 0.82
SMN2-215ENST00000628696 CASP1P29466 404 aa20.17■□□□□ 0.82
SMN2-215ENST00000628696 KDSRQ06136 332 aa20.17■□□□□ 0.82
SMN2-215ENST00000628696 CRY1Q16526 586 aa20.17■□□□□ 0.82
SMN2-215ENST00000628696 EMC10Q5UCC4 262 aa20.17■□□□□ 0.82
SMN2-215ENST00000628696 DAB2IPQ5VWQ8 1189 aa20.17■□□□□ 0.82
SMN2-215ENST00000628696 RHBDF2Q6PJF5 856 aa20.17■□□□□ 0.82
SMN2-215ENST00000628696 TMEM92Q6UXU6 159 aa20.17■□□□□ 0.82
SMN2-215ENST00000628696 CYP2U1Q7Z449 544 aa20.17■□□□□ 0.82
SMN2-215ENST00000628696 RASSF3Q86WH2 238 aa20.17■□□□□ 0.82
SMN2-215ENST00000628696 DDX42Q86XP3 938 aaKnown RBP eCLIP20.17■□□□□ 0.82
SMN2-215ENST00000628696 NUP93Q8N1F7 819 aa20.17■□□□□ 0.82
SMN2-215ENST00000628696 KIAA1958Q8N8K9 716 aa20.17■□□□□ 0.82
SMN2-215ENST00000628696 B3GALNT2Q8NCR0 500 aa20.17■□□□□ 0.82
SMN2-215ENST00000628696 MDGA1Q8NFP4 955 aa20.17■□□□□ 0.82
SMN2-215ENST00000628696 FBXO32Q969P5 355 aa20.17■□□□□ 0.82
SMN2-215ENST00000628696 C7orf25Q9BPX7 421 aa20.17■□□□□ 0.82
SMN2-215ENST00000628696 MED10Q9BTT4 135 aa20.17■□□□□ 0.82
SMN2-215ENST00000628696 CHORDC1Q9UHD1 332 aaPredicted RBP20.17■□□□□ 0.82
SMN2-215ENST00000628696 GON4LQ3T8J9 2241 aa20.17■□□□□ 0.82
SMN2-215ENST00000628696 LNP1A1A4G5 178 aa20.16■□□□□ 0.82
SMN2-215ENST00000628696 MAP3K13O43283 966 aa20.16■□□□□ 0.82
SMN2-215ENST00000628696 CUTAO60888 179 aa20.16■□□□□ 0.82
SMN2-215ENST00000628696 KAT7O95251 611 aa20.16■□□□□ 0.82
SMN2-215ENST00000628696 ADH1CP00326 375 aa20.16■□□□□ 0.82
SMN2-215ENST00000628696 ADH5P11766 374 aa20.16■□□□□ 0.82
SMN2-215ENST00000628696 HNRNPLP14866 589 aaKnown RBP eCLIP20.16■□□□□ 0.82
SMN2-215ENST00000628696 NOVA1P51513 510 aaKnown RBP20.16■□□□□ 0.82
SMN2-215ENST00000628696 CDH8P55286 799 aa20.16■□□□□ 0.82
SMN2-215ENST00000628696 SNRPFP62306 86 aaKnown RBP20.16■□□□□ 0.82
SMN2-215ENST00000628696 MESP2Q0VG99 397 aa20.16■□□□□ 0.82
SMN2-215ENST00000628696 FOXD4L5Q5VV16 416 aaPredicted RBP20.16■□□□□ 0.82
SMN2-215ENST00000628696 SHC4Q6S5L8 630 aa20.16■□□□□ 0.82
SMN2-215ENST00000628696 UNC13DQ70J99 1090 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms