RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 TMEM161AQ9NX61 479 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 SYBUQ9NX95 663 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 LMTK2Q8IWU2 1503 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 POLBP06746 335 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 CYP2A7P20853 494 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 CRYBB1P53674 252 aaPredicted RBP11.51□□□□□ -0.57
VPS8-227ENST00000625842 BCL2L1Q07817 233 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 LAMTOR4Q0VGL1 99 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 GRIK3Q13003 919 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 PRR23CQ6ZRP0 262 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 SUN3Q8TAQ9 357 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 USP33Q8TEY7 942 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 VMP1Q96GC9 406 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 IRF2BPLQ9H1B7 796 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 PTGER2P43116 358 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 ACTN3Q08043 901 aaPredicted RBP11.5□□□□□ -0.57
VPS8-227ENST00000625842 UBXN2BQ14CS0 331 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 RASEFQ8IZ41 740 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 PPM1NQ8N819 430 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 IPMKQ8NFU5 416 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 KLHL28Q9NXS3 571 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 SMIM22K7EJ46 135 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 ACKR2O00590 384 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 KCNN4O15554 427 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 CTIFO43310 598 aaKnown RBP11.5□□□□□ -0.57
VPS8-227ENST00000625842 PALMO75781 387 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 MLYCDO95822 493 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 TRIM49P0CI25 452 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 TRIM49CP0CI26 452 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 LAMC1P11047 1609 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 EIF4BP23588 611 aaKnown RBP11.5□□□□□ -0.57
VPS8-227ENST00000625842 TLX1P31314 330 aaPredicted RBP11.5□□□□□ -0.57
VPS8-227ENST00000625842 CYP2C18P33260 490 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 RPL21P46778 160 aaKnown RBP11.5□□□□□ -0.57
VPS8-227ENST00000625842 BEX3Q00994 111 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 DCLRE1AQ6PJP8 1040 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 PRR23BQ6ZRT6 265 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 KCNS3Q9BQ31 491 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 OSBPL1AQ9BXW6 950 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 ZNF556Q9HAH1 456 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 ZSCAN32Q9NX65 697 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 SNCAIPQ9Y6H5 919 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 FGGP02679 453 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 OR56A5P0C7T3 313 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 LRRC74AQ0VAA2 488 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 SPARCL1Q14515 664 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 PCSK7Q16549 785 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 TBC1D25Q3MII6 688 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 PLPP4Q5VZY2 271 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 ALS2CLQ60I27 953 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 TNIP2Q8NFZ5 429 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 PRDM16Q9HAZ2 1276 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 PSME2Q9UL46 239 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 HCN4Q9Y3Q4 1203 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 INSL6Q9Y581 213 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 A0A087WUV0 522 aaPredicted RBP11.5□□□□□ -0.57
VPS8-227ENST00000625842 F8W810 466 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 BAG2O95816 211 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 ANXA5P08758 320 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 FXR2P51116 673 aaKnown RBP eCLIP11.5□□□□□ -0.57
VPS8-227ENST00000625842 BLKP51451 505 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 MDM2Q00987 491 aaPredicted RBP11.5□□□□□ -0.57
VPS8-227ENST00000625842 PDK2Q15119 407 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 ICE2Q659A1 982 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 GRAMD4Q6IC98 578 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 RNF135Q8IUD6 432 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 CASP10Q92851 521 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 APOL5Q9BWW9 433 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 TMEM117Q9H0C3 514 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 PCMTD2Q9NV79 361 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 TBC1D13Q9NVG8 400 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 DNMT3LQ9UJW3 386 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 UNC13BO14795 1591 aa11.5□□□□□ -0.57
VPS8-227ENST00000625842 PTPN11Q06124 597 aaPredicted RBP11.49□□□□□ -0.57
VPS8-227ENST00000625842 CYP2A13Q16696 494 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 UHMK1Q8TAS1 419 aaKnown RBP11.49□□□□□ -0.57
VPS8-227ENST00000625842 MTMR9Q96QG7 549 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 PNKPQ96T60 521 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 REEP2Q9BRK0 252 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 BCL2L12Q9HB09 334 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 BARX2Q9UMQ3 279 aaPredicted RBP11.49□□□□□ -0.57
VPS8-227ENST00000625842 MRPS33Q9Y291 106 aaKnown RBP11.49□□□□□ -0.57
VPS8-227ENST00000625842 H3BMM5 538 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 CLTBP09497 229 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 GPAT2Q6NUI2 795 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 LRRC8DQ7L1W4 858 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 C11orf96Q7Z7L8 435 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 JAMLQ86YT9 394 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 AVL9Q8NBF6 648 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 HJURPQ8NCD3 748 aaPredicted RBP11.49□□□□□ -0.57
VPS8-227ENST00000625842 VPS33AQ96AX1 596 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 HEMGNQ9BXL5 484 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 OSBPL6Q9BZF3 934 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 GID8Q9NWU2 228 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 ATP6V1HQ9UI12 483 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 A0A1W2PQ67 120 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 SOCS7O14512 581 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 FGFR1P11362 822 aa11.49□□□□□ -0.57
VPS8-227ENST00000625842 ETF1P62495 437 aaKnown RBP11.49□□□□□ -0.57
VPS8-227ENST00000625842 SKOR1P84550 965 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms