RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 CYTH2Q99418 400 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 BCO2Q9BYV7 579 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 C2orf40Q9H1Z8 148 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 R3HDMLQ9H3Y0 253 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 RPF1Q9H9Y2 349 aaKnown RBP11.77□□□□□ -0.53
VARS2-213ENST00000625423 SLC5A4Q9NY91 659 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 A0A0G2JND7 137 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 TCRBV9S1A1TA0A576 114 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 KBTBD13C9JR72 458 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 LPXNO60711 386 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 AVILO75366 819 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 ITGB3P05106 788 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 RASSF2P50749 326 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 ROR1Q01973 937 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 KBTBD12Q3ZCT8 623 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 CLNKQ7Z7G1 428 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 UBA3Q8TBC4 463 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 ALKBH8Q96BT7 664 aaKnown RBP11.76□□□□□ -0.53
VARS2-213ENST00000625423 ADPGKQ9BRR6 497 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 CDT1Q9H211 546 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 VPS11Q9H270 941 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 MINDY3Q9H8M7 445 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 IGKV6-21A0A0C4DH24 114 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 CDC25CP30307 473 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 CDH6P55285 790 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 SLC8A3P57103 927 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 YWHAGP61981 247 aaKnown RBP eCLIP11.76□□□□□ -0.53
VARS2-213ENST00000625423 FAAP100Q0VG06 881 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 CRYMQ14894 314 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 MAB21L3Q8N8X9 362 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 MCRS1Q96EZ8 462 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 GPR20Q99678 358 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 ASCC2Q9H1I8 757 aaPredicted RBP11.76□□□□□ -0.53
VARS2-213ENST00000625423 FZD8Q9H461 694 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 RSAD1Q9HA92 442 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.76□□□□□ -0.53
VARS2-213ENST00000625423 IKBKGQ9Y6K9 419 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 NOP56O00567 594 aaKnown RBP11.76□□□□□ -0.53
VARS2-213ENST00000625423 PEX11AO75192 247 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 CSDE1O75534 798 aaKnown RBP11.76□□□□□ -0.53
VARS2-213ENST00000625423 TGFB3P10600 412 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 CLCN3P51790 818 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 CTC1Q2NKJ3 1217 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 RIOX2Q8IUF8 465 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 APOBEC3FQ8IUX4 373 aaKnown RBP11.76□□□□□ -0.53
VARS2-213ENST00000625423 NLGN2Q8NFZ4 835 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 TRPM4Q8TD43 1214 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 TMEM176AQ96HP8 235 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 FAM111AQ96PZ2 611 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 RNPEPL1Q9HAU8 725 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 ASNSD1Q9NWL6 643 aa11.76□□□□□ -0.53
VARS2-213ENST00000625423 IQANK1A0A1B0GTG1 560 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 LACTBL1A8MY62 500 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 SMAPO00193 183 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 PTPN4P29074 926 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 GPD2P43304 727 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 ZNF200P98182 395 aaPredicted RBP11.75□□□□□ -0.53
VARS2-213ENST00000625423 CDO1Q16878 200 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 C15orf59Q2T9L4 293 aaPredicted RBP11.75□□□□□ -0.53
VARS2-213ENST00000625423 C1orf228Q6PIY5 440 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 BZW1Q7L1Q6 419 aaKnown RBP11.75□□□□□ -0.53
VARS2-213ENST00000625423 ZNF398Q8TD17 642 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 TTC17Q96AE7 1141 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 HEXIM2Q96MH2 286 aaKnown RBP11.75□□□□□ -0.53
VARS2-213ENST00000625423 TSSK1BQ9BXA7 367 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 TRIM55Q9BYV6 548 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 GGA3Q9NZ52 723 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 HEY2Q9UBP5 337 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 SUFUQ9UMX1 484 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 H7C0C1 242 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 GPR25O00155 361 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 GAS2O43903 313 aaKnown RBP11.75□□□□□ -0.53
VARS2-213ENST00000625423 CILPO75339 1184 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 GRAP2O75791 330 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 INHBAP08476 426 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 IQCF3P0C7M6 154 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 PYGBP11216 843 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 NEFHP12036 1026 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 CALB2P22676 271 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 STIP1P31948 543 aaKnown RBP11.75□□□□□ -0.53
VARS2-213ENST00000625423 GABRB2P47870 512 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 ATP5OP48047 213 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 GCLCP48506 637 aaPredicted RBP11.75□□□□□ -0.53
VARS2-213ENST00000625423 NOMO1Q15155 1222 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 SH3D19Q5HYK7 790 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 JADE1Q6IE81 842 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 TTC8Q8TAM2 541 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 SLC44A1Q8WWI5 657 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 CNKSR2Q8WXI2 1034 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 FAF2Q96CS3 445 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 PIWIL1Q96J94 861 aaKnown RBP11.75□□□□□ -0.53
VARS2-213ENST00000625423 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.75□□□□□ -0.53
VARS2-213ENST00000625423 TEX264Q9Y6I9 313 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 CFAP69A5D8W1 941 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 TRAFD1O14545 582 aaPredicted RBP11.75□□□□□ -0.53
VARS2-213ENST00000625423 TSHRP16473 764 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 GNAZP19086 355 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 KCNJ11Q14654 390 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 TRNP1Q6NT89 227 aa11.75□□□□□ -0.53
VARS2-213ENST00000625423 PRPF39Q86UA1 669 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms