RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 DPEP3Q9H4B8 488 aa20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 CA12O43570 354 aa20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 GRAP2O75791 330 aa20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 TOMM70O94826 608 aa20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 AKR1A1P14550 325 aa20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 MAGEA4P43358 317 aa20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 PPARDQ03181 441 aa20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 PDE4CQ08493 712 aa20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 RNASEH2BQ5TBB1 312 aaKnown RBP20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 PAXIP1Q6ZW49 1069 aaPredicted RBP20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 ZDHHC17Q8IUH5 632 aa20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 MDM1Q8TC05 714 aa20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 ZNF473Q8WTR7 871 aaKnown RBP20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 KHSRPQ92945 711 aaKnown RBP eCLIP20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 CALN1Q9BXU9 219 aa20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 SHOC2Q9UQ13 582 aa20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 RRP15Q9Y3B9 282 aaKnown RBP20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 IPPQ9Y573 584 aa20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 SPTLC1O15269 473 aa20.64■□□□□ 0.89
PCDHB11-202ENST00000624887 PRPSAP2O60256 369 aa20.64■□□□□ 0.89
PCDHB11-202ENST00000624887 GABBR2O75899 941 aa20.64■□□□□ 0.89
PCDHB11-202ENST00000624887 IFNB1P01574 187 aa20.64■□□□□ 0.89
PCDHB11-202ENST00000624887 CYP4F22Q6NT55 531 aa20.64■□□□□ 0.89
PCDHB11-202ENST00000624887 TAOK1Q7L7X3 1001 aa20.64■□□□□ 0.89
PCDHB11-202ENST00000624887 LIMS2Q7Z4I7 341 aa20.64■□□□□ 0.89
PCDHB11-202ENST00000624887 SMG8Q8ND04 991 aaKnown RBP20.64■□□□□ 0.89
PCDHB11-202ENST00000624887 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.64■□□□□ 0.89
PCDHB11-202ENST00000624887 PCNTO95613 3336 aa20.64■□□□□ 0.89
PCDHB11-202ENST00000624887 PAPSS1O43252 624 aaPredicted RBP20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 ABHD2P08910 425 aa20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 FGFR1P11362 822 aa20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 PECAM1P16284 738 aaPredicted RBP20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 GNL1P36915 607 aaPredicted RBP20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 TAF6P49848 677 aa20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 CDH6P55285 790 aa20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 RAB6CQ53S08 254 aa20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 TAF2Q6P1X5 1199 aa20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 PCGF5Q86SE9 256 aa20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 SCUBE3Q8IX30 993 aa20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 C9orf72Q96LT7 481 aa20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 CFAP57Q96MR6 1250 aa20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 SELENOSQ9BQE4 189 aa20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 RAB6CQ9H0N0 254 aa20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 DUSP11O75319 330 aaKnown RBP20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 CHN1P15882 459 aa20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 ATP5DP30049 168 aa20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 SOX4Q06945 474 aaPredicted RBP20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 BST2Q10589 180 aaKnown RBP20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 CDO1Q16878 200 aa20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 CCDC142Q17RM4 750 aa20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 BOLA3Q53S33 107 aa20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 ERMARDQ5T6L9 678 aa20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 B4GALNT4Q76KP1 1039 aa20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 ANKRD52Q8NB46 1076 aa20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 ARRDC4Q8NCT1 418 aa20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 LPIN3Q9BQK8 851 aa20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 SAYSD1Q9NPB0 183 aa20.63■□□□□ 0.89
PCDHB11-202ENST00000624887 HCRTO43612 131 aa20.62■□□□□ 0.89
PCDHB11-202ENST00000624887 KPNA6O60684 536 aa20.62■□□□□ 0.89
PCDHB11-202ENST00000624887 PDGFRBP09619 1106 aa20.62■□□□□ 0.89
PCDHB11-202ENST00000624887 SDC4P31431 198 aa20.62■□□□□ 0.89
PCDHB11-202ENST00000624887 BCAT1P54687 386 aa20.62■□□□□ 0.89
PCDHB11-202ENST00000624887 GDF10P55107 478 aa20.62■□□□□ 0.89
PCDHB11-202ENST00000624887 DPYSL3Q14195 570 aa20.62■□□□□ 0.89
PCDHB11-202ENST00000624887 STAT4Q14765 748 aa20.62■□□□□ 0.89
PCDHB11-202ENST00000624887 SV2CQ496J9 727 aa20.62■□□□□ 0.89
PCDHB11-202ENST00000624887 EXOC3L1Q86VI1 746 aa20.62■□□□□ 0.89
PCDHB11-202ENST00000624887 FAM228AQ86W67 206 aa20.62■□□□□ 0.89
PCDHB11-202ENST00000624887 APPL2Q8NEU8 664 aa20.62■□□□□ 0.89
PCDHB11-202ENST00000624887 RSAD2Q8WXG1 361 aa20.62■□□□□ 0.89
PCDHB11-202ENST00000624887 TTC25Q96NG3 672 aa20.62■□□□□ 0.89
PCDHB11-202ENST00000624887 XPO6Q96QU8 1125 aaKnown RBP20.62■□□□□ 0.89
PCDHB11-202ENST00000624887 NCAPGQ9BPX3 1015 aa20.62■□□□□ 0.89
PCDHB11-202ENST00000624887 CCDC77Q9BR77 488 aa20.62■□□□□ 0.89
PCDHB11-202ENST00000624887 MAK16Q9BXY0 300 aaKnown RBP20.62■□□□□ 0.89
PCDHB11-202ENST00000624887 SNX25Q9H3E2 840 aa20.62■□□□□ 0.89
PCDHB11-202ENST00000624887 GOLGA2P5Q9HBQ8 144 aa20.62■□□□□ 0.89
PCDHB11-202ENST00000624887 FARP1Q9Y4F1 1045 aaPredicted RBP20.62■□□□□ 0.89
PCDHB11-202ENST00000624887 LMO2P25791 158 aa20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 RPL34P49207 117 aaKnown RBP20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 EIF3EP60228 445 aaKnown RBP20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 ATP11AP98196 1134 aa20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 MMRN1Q13201 1228 aa20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 TFDP2Q14188 446 aa20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 PDK2Q15119 407 aa20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 FAM47CQ5HY64 1035 aa20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 TWF2Q6IBS0 349 aaKnown RBP20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 MAP7D3Q8IWC1 876 aa20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 FAM172AQ8WUF8 416 aa20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 TEKT4Q8WW24 435 aa20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 PRCCQ92733 491 aaPredicted RBP20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 B3GNT5Q9BYG0 378 aa20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 DNAI2Q9GZS0 605 aa20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 CYLDQ9NQC7 956 aa20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 MYADML2A6NDP7 307 aa20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 MCF2LO15068 1137 aa20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 C6orf222P0C671 652 aaPredicted RBP20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 CCDC130P13994 396 aa20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 DESP17661 470 aa20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 ZNF618Q5T7W0 954 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms