RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.72□□□□□ -1.65
ATRX-209ENST00000623242 PAPPAQ13219 1627 aa4.72□□□□□ -1.65
ATRX-209ENST00000623242 XDHP47989 1333 aa4.72□□□□□ -1.65
ATRX-209ENST00000623242 USP42Q9H9J4 1324 aaKnown RBP4.72□□□□□ -1.65
ATRX-209ENST00000623242 SIPA1L3O60292 1781 aaPredicted RBP4.71□□□□□ -1.66
ATRX-209ENST00000623242 ADCY9O60503 1353 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 KRTAP23-1A1A580 65 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 ZNF785A8K8V0 405 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 ZNF185O15231 689 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 MGEA5O60502 916 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 CAMTA2O94983 1202 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 FCER1AP12319 257 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 GCSHP23434 173 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 PSMA5P28066 241 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 HIBADHP31937 336 aaKnown RBP4.71□□□□□ -1.66
ATRX-209ENST00000623242 TM4SF4P48230 202 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 SUMO3P55854 103 aaPredicted RBP4.71□□□□□ -1.66
ATRX-209ENST00000623242 NUCB2P80303 420 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 FMO1Q01740 532 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 NHLH2Q02577 135 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 HHEXQ03014 270 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 PICALMQ13492 652 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 RRP1BQ14684 758 aaKnown RBP4.71□□□□□ -1.66
ATRX-209ENST00000623242 CNGA2Q16280 664 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 PARP10Q53GL7 1025 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 BEND3Q5T5X7 828 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 AGAP9Q5VTM2 703 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 TBC1D9BQ66K14 1250 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 ZNF585AQ6P3V2 769 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 CLEC4GQ6UXB4 293 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 PDSS2Q86YH6 399 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 GSPT2Q8IYD1 628 aaKnown RBP4.71□□□□□ -1.66
ATRX-209ENST00000623242 CNBD1Q8NA66 436 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 CXorf38Q8TB03 319 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 KBTBD7Q8WVZ9 684 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 PHKBQ93100 1093 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 LOXL4Q96JB6 756 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 KRTAP3-1Q9BYR8 98 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 LRRC27Q9C0I9 530 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 NYXQ9GZU5 481 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 BTBD1Q9H0C5 482 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 NUP62CLQ9H1M0 184 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 KLHL11Q9NVR0 708 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 PIH1D1Q9NWS0 290 aaKnown RBP4.71□□□□□ -1.66
ATRX-209ENST00000623242 CFAP97Q9P2B7 532 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 CORO2BQ9UQ03 480 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 CLCA2Q9UQC9 943 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 CHST2Q9Y4C5 530 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 C4BP0C0L5 1744 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 AOX1Q06278 1338 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 SH3TC1Q8TE82 1336 aa4.71□□□□□ -1.66
ATRX-209ENST00000623242 C5P01031 1676 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 VIRMAQ69YN4 1812 aaKnown RBP4.7□□□□□ -1.66
ATRX-209ENST00000623242 SBF2Q86WG5 1849 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 CARMIL3Q8ND23 1372 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 TJP1Q07157 1748 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 AHRRA9YTQ3 701 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 F8W8V4 182 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 GRM8O00222 908 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 ABHD16AO95870 558 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 SERPINB2P05120 415 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 MMP10P09238 476 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 CKBP12277 381 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 GYS1P13807 737 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 MX1P20591 662 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 MGAT1P26572 445 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 MAN2A2P49641 1150 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 PRIM2P49643 509 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 CASP5P51878 434 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 ZNF135P52742 658 aaPredicted RBP4.7□□□□□ -1.66
ATRX-209ENST00000623242 RNASE9P60153 205 aaKnown RBP4.7□□□□□ -1.66
ATRX-209ENST00000623242 GCKRQ14397 625 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 LONRF1Q17RB8 773 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 LCE5AQ5TCM9 118 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 SUSD4Q5VX71 490 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 CEP85Q6P2H3 762 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 LRRC55Q6ZSA7 311 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 TICAM2Q86XR7 235 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 PCSK9Q8NBP7 692 aaKnown RBP4.7□□□□□ -1.66
ATRX-209ENST00000623242 PDPRQ8NCN5 879 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 CCDC191Q8NCU4 936 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 SLC17A8Q8NDX2 589 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 SCAMP4Q969E2 229 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 SYAP1Q96A49 352 aaPredicted RBP4.7□□□□□ -1.66
ATRX-209ENST00000623242 FAM89AQ96GI7 184 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 MARS2Q96GW9 593 aaKnown RBP4.7□□□□□ -1.66
ATRX-209ENST00000623242 LRIG1Q96JA1 1093 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 ADOQ96SZ5 270 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 MEIS3Q99687 375 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 IMPG2Q9BZV3 1241 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 TINAGL1Q9GZM7 467 aaPredicted RBP4.7□□□□□ -1.66
ATRX-209ENST00000623242 TMX4Q9H1E5 349 aaPredicted RBP4.7□□□□□ -1.66
ATRX-209ENST00000623242 CNNM1Q9NRU3 951 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 COL20A1Q9P218 1284 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 HSFX1Q9UBD0 423 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 LRRFIP2Q9Y608 721 aaKnown RBP4.7□□□□□ -1.66
ATRX-209ENST00000623242 LAMB4A4D0S4 1761 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 UBR2Q8IWV8 1755 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 TTC41PQ6P2S7 1318 aa4.7□□□□□ -1.66
ATRX-209ENST00000623242 TNS1Q9HBL0 1735 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms