RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 CACNA2D1P54289 1103 aa11.7□□□□□ -0.54
LINC00963-214ENST00000622680 MYO1EQ12965 1108 aa11.7□□□□□ -0.54
LINC00963-214ENST00000622680 RESTQ13127 1097 aa11.7□□□□□ -0.54
LINC00963-214ENST00000622680 USP39Q53GS9 565 aaKnown RBP11.7□□□□□ -0.54
LINC00963-214ENST00000622680 UNQ6494/PRO21346Q6UXR6 183 aa11.7□□□□□ -0.54
LINC00963-214ENST00000622680 LIMS2Q7Z4I7 341 aa11.7□□□□□ -0.54
LINC00963-214ENST00000622680 PDILTQ8N807 584 aa11.7□□□□□ -0.54
LINC00963-214ENST00000622680 FRMD1Q8N878 549 aa11.7□□□□□ -0.54
LINC00963-214ENST00000622680 RLN3Q8WXF3 142 aa11.7□□□□□ -0.54
LINC00963-214ENST00000622680 PCED1BQ96HM7 432 aa11.7□□□□□ -0.54
LINC00963-214ENST00000622680 SPATA17Q96L03 361 aa11.7□□□□□ -0.54
LINC00963-214ENST00000622680 CNOT6LQ96LI5 555 aaKnown RBP11.7□□□□□ -0.54
LINC00963-214ENST00000622680 MRPL45Q9BRJ2 306 aaKnown RBP11.7□□□□□ -0.54
LINC00963-214ENST00000622680 RNF38Q9H0F5 515 aa11.7□□□□□ -0.54
LINC00963-214ENST00000622680 TMEM9BQ9NQ34 198 aa11.7□□□□□ -0.54
LINC00963-214ENST00000622680 PANK4Q9NVE7 773 aa11.7□□□□□ -0.54
LINC00963-214ENST00000622680 TRPM5Q9NZQ8 1165 aa11.7□□□□□ -0.54
LINC00963-214ENST00000622680 CDH9Q9ULB4 789 aa11.7□□□□□ -0.54
LINC00963-214ENST00000622680 PCDHB13Q9Y5F0 798 aa11.7□□□□□ -0.54
LINC00963-214ENST00000622680 SRPRBQ9Y5M8 271 aaKnown RBP11.7□□□□□ -0.54
LINC00963-214ENST00000622680 CPQQ9Y646 472 aa11.7□□□□□ -0.54
LINC00963-214ENST00000622680 CELSR3Q9NYQ7 3312 aa11.7□□□□□ -0.54
LINC00963-214ENST00000622680 BPTFQ12830 3046 aa11.69□□□□□ -0.54
LINC00963-214ENST00000622680 SGK1O00141 431 aa11.69□□□□□ -0.54
LINC00963-214ENST00000622680 CDX4O14627 284 aaPredicted RBP11.69□□□□□ -0.54
LINC00963-214ENST00000622680 TNNC2P02585 160 aa11.69□□□□□ -0.54
LINC00963-214ENST00000622680 PROS1P07225 676 aa11.69□□□□□ -0.54
LINC00963-214ENST00000622680 CHRM1P11229 460 aaPredicted RBP11.69□□□□□ -0.54
LINC00963-214ENST00000622680 WARSP23381 471 aaKnown RBP11.69□□□□□ -0.54
LINC00963-214ENST00000622680 TIE1P35590 1138 aa11.69□□□□□ -0.54
LINC00963-214ENST00000622680 IRX4P78413 519 aa11.69□□□□□ -0.54
LINC00963-214ENST00000622680 ALCAMQ13740 583 aa11.69□□□□□ -0.54
LINC00963-214ENST00000622680 CRY1Q16526 586 aa11.69□□□□□ -0.54
LINC00963-214ENST00000622680 UAP1L1Q3KQV9 507 aa11.69□□□□□ -0.54
LINC00963-214ENST00000622680 DAB2IPQ5VWQ8 1189 aa11.69□□□□□ -0.54
LINC00963-214ENST00000622680 VSTM1Q6UX27 236 aa11.69□□□□□ -0.54
LINC00963-214ENST00000622680 TXNDC5Q8NBS9 432 aaKnown RBP11.69□□□□□ -0.54
LINC00963-214ENST00000622680 PIGKQ92643 395 aa11.69□□□□□ -0.54
LINC00963-214ENST00000622680 MMS19Q96T76 1030 aa11.69□□□□□ -0.54
LINC00963-214ENST00000622680 TTLL2Q9BWV7 592 aa11.69□□□□□ -0.54
LINC00963-214ENST00000622680 DPEP3Q9H4B8 488 aa11.69□□□□□ -0.54
LINC00963-214ENST00000622680 HSPBP1Q9NZL4 362 aa11.69□□□□□ -0.54
LINC00963-214ENST00000622680 CFAP97Q9P2B7 532 aa11.69□□□□□ -0.54
LINC00963-214ENST00000622680 R3HCC1Q9Y3T6 440 aaKnown RBP11.69□□□□□ -0.54
LINC00963-214ENST00000622680 IGSF10Q6WRI0 2623 aa11.69□□□□□ -0.54
LINC00963-214ENST00000622680 PLXNA2O75051 1894 aa11.68□□□□□ -0.54
LINC00963-214ENST00000622680 APC2O95996 2303 aa11.68□□□□□ -0.54
LINC00963-214ENST00000622680 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.68□□□□□ -0.54
LINC00963-214ENST00000622680 ZNF840PA6NDX5 716 aa11.68□□□□□ -0.54
LINC00963-214ENST00000622680 TRIM66O15016 1216 aa11.68□□□□□ -0.54
LINC00963-214ENST00000622680 KHNYNO15037 678 aaKnown RBP11.68□□□□□ -0.54
LINC00963-214ENST00000622680 OLFM2O95897 454 aa11.68□□□□□ -0.54
LINC00963-214ENST00000622680 OAS1P00973 400 aaKnown RBP11.68□□□□□ -0.54
LINC00963-214ENST00000622680 MBL2P11226 248 aaPredicted RBP11.68□□□□□ -0.54
LINC00963-214ENST00000622680 HOXD13P35453 343 aa11.68□□□□□ -0.54
LINC00963-214ENST00000622680 PDE6CP51160 858 aa11.68□□□□□ -0.54
LINC00963-214ENST00000622680 SLC7A9P82251 487 aa11.68□□□□□ -0.54
LINC00963-214ENST00000622680 TAF10Q12962 218 aa11.68□□□□□ -0.54
LINC00963-214ENST00000622680 DHCR24Q15392 516 aa11.68□□□□□ -0.54
LINC00963-214ENST00000622680 EMC10Q5UCC4 262 aa11.68□□□□□ -0.54
LINC00963-214ENST00000622680 KIAA1211LQ6NV74 962 aa11.68□□□□□ -0.54
LINC00963-214ENST00000622680 CCDC73Q6ZRK6 1079 aa11.68□□□□□ -0.54
LINC00963-214ENST00000622680 HS2ST1Q7LGA3 356 aa11.68□□□□□ -0.54
LINC00963-214ENST00000622680 TMEFF1Q8IYR6 380 aa11.68□□□□□ -0.54
LINC00963-214ENST00000622680 IL17RCQ8NAC3 791 aa11.68□□□□□ -0.54
LINC00963-214ENST00000622680 DEFB124Q8NES8 71 aa11.68□□□□□ -0.54
LINC00963-214ENST00000622680 OLIG1Q8TAK6 271 aa11.68□□□□□ -0.54
LINC00963-214ENST00000622680 MYCBPAPQ8TBZ2 947 aa11.68□□□□□ -0.54
LINC00963-214ENST00000622680 HMGB4Q8WW32 186 aa11.68□□□□□ -0.54
LINC00963-214ENST00000622680 FNBP1Q96RU3 617 aa11.68□□□□□ -0.54
LINC00963-214ENST00000622680 ZNF518BQ9C0D4 1074 aa11.68□□□□□ -0.54
LINC00963-214ENST00000622680 MBD1Q9UIS9 605 aaPredicted RBP11.68□□□□□ -0.54
LINC00963-214ENST00000622680 ZMIZ1Q9ULJ6 1067 aa11.68□□□□□ -0.54
LINC00963-214ENST00000622680 WASF3Q9UPY6 502 aa11.68□□□□□ -0.54
LINC00963-214ENST00000622680 MUC22E2RYF6 1773 aaPredicted RBP11.67□□□□□ -0.54
LINC00963-214ENST00000622680 MYLKQ15746 1914 aa11.67□□□□□ -0.54
LINC00963-214ENST00000622680 ZNF233A6NK53 670 aa11.67□□□□□ -0.54
LINC00963-214ENST00000622680 CLDN5O00501 218 aa11.67□□□□□ -0.54
LINC00963-214ENST00000622680 ADAM23O75077 832 aa11.67□□□□□ -0.54
LINC00963-214ENST00000622680 KAT7O95251 611 aa11.67□□□□□ -0.54
LINC00963-214ENST00000622680 DLATP10515 647 aaKnown RBP11.67□□□□□ -0.54
LINC00963-214ENST00000622680 P2RY2P41231 377 aa11.67□□□□□ -0.54
LINC00963-214ENST00000622680 PTGER3P43115 390 aa11.67□□□□□ -0.54
LINC00963-214ENST00000622680 MAPK8P45983 427 aa11.67□□□□□ -0.54
LINC00963-214ENST00000622680 NOP14P78316 857 aaKnown RBP11.67□□□□□ -0.54
LINC00963-214ENST00000622680 MAPRE1Q15691 268 aaKnown RBP11.67□□□□□ -0.54
LINC00963-214ENST00000622680 TRIM61Q5EBN2 209 aa11.67□□□□□ -0.54
LINC00963-214ENST00000622680 RHBDF2Q6PJF5 856 aa11.67□□□□□ -0.54
LINC00963-214ENST00000622680 DPH6Q7L8W6 267 aa11.67□□□□□ -0.54
LINC00963-214ENST00000622680 TRAPPC11Q7Z392 1133 aa11.67□□□□□ -0.54
LINC00963-214ENST00000622680 C11orf74Q86VG3 221 aa11.67□□□□□ -0.54
LINC00963-214ENST00000622680 WDR49Q8IV35 697 aa11.67□□□□□ -0.54
LINC00963-214ENST00000622680 RDH13Q8NBN7 331 aa11.67□□□□□ -0.54
LINC00963-214ENST00000622680 ERLEC1Q96DZ1 483 aa11.67□□□□□ -0.54
LINC00963-214ENST00000622680 USP28Q96RU2 1077 aa11.67□□□□□ -0.54
LINC00963-214ENST00000622680 PNKPQ96T60 521 aa11.67□□□□□ -0.54
LINC00963-214ENST00000622680 TMEM121BQ9BXQ6 578 aaPredicted RBP11.67□□□□□ -0.54
LINC00963-214ENST00000622680 ADAM33Q9BZ11 813 aa11.67□□□□□ -0.54
LINC00963-214ENST00000622680 SNX25Q9H3E2 840 aa11.67□□□□□ -0.54
LINC00963-214ENST00000622680 FSCN3Q9NQT6 498 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms